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The map label for this gene is ynfA [C]

Identifier: 37523743

GI number: 37523743

Start: 4374253

End: 4374576

Strand: Direct

Name: ynfA [C]

Synonym: glr4174

Alternate gene names: 37523743

Gene position: 4374253-4374576 (Clockwise)

Preceding gene: 37523742

Following gene: 37523746

Centisome position: 93.89

GC content: 64.2

Gene sequence:

>324_bases
ATGGCTCTGCTGCTGTTTGGGCTTGCGGCGGCGGCCGAAATTGGCGGCTGTTTTGCGTTCTGGTCGGTATTGCGCCTGGG
TAAAAATCCGCTCTGGCTGGCCCCCGGCCTGGTGTCGCTGGTGGTATTCGCCTGGCTTTTGACGCGCTCGGAGGCGACCT
ACGCCGGTCGGGCCTACGCGGCCTATGGCGGTGTCTATATCGCGGCGTCGCTGGTGTGGTTGTGGCTGGTAGAAGGTACC
CGGCCGGATCGCTGGGATCTGGCCGGGGCACTTTTATGCTTGGCAGGAGCGGCCGTTATCCTGTTTGCCGACCGCTCCCC
GTAG

Upstream 100 bases:

>100_bases
CTCTGTGTGGATCGGGGCGGCGCTTGTGACGTTTTTGTTGACCGATACGCTGCCGCACCTGTTGGATGTGCTGCTGGCGG
GCGGGGGCTGAGCGCGGCCG

Downstream 100 bases:

>100_bases
AGCCGTTTATCGGTTGGACGGCCGACGGCGAGCCCAGCGCACGACCATCATCGCGCCGAGCGCCGCGAAGATGACCATCA
TCGCGAGGATGAACCAGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MALLLFGLAAAAEIGGCFAFWSVLRLGKNPLWLAPGLVSLVVFAWLLTRSEATYAGRAYAAYGGVYIAASLVWLWLVEGT
RPDRWDLAGALLCLAGAAVILFADRSP

Sequences:

>Translated_107_residues
MALLLFGLAAAAEIGGCFAFWSVLRLGKNPLWLAPGLVSLVVFAWLLTRSEATYAGRAYAAYGGVYIAASLVWLWLVEGT
RPDRWDLAGALLCLAGAAVILFADRSP
>Mature_106_residues
ALLLFGLAAAAEIGGCFAFWSVLRLGKNPLWLAPGLVSLVVFAWLLTRSEATYAGRAYAAYGGVYIAASLVWLWLVEGTR
PDRWDLAGALLCLAGAAVILFADRSP

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=98, Percent_Identity=43.8775510204082, Blast_Score=69, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4174_GLOVI (Q7NDQ8)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_927120.1
- GeneID:   2602577
- GenomeReviews:   BA000045_GR
- KEGG:   gvi:glr4174
- NMPDR:   fig|251221.1.peg.4174
- HOGENOM:   HBG313568
- OMA:   ALWVIPA
- BioCyc:   GVIO251221:GLR4174-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 11417; Mature: 11285

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x17b7b0e8)-; HASH(0x17ba9c14)-; HASH(0x17219ce0)-; HASH(0x182cfe84)-;

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLLFGLAAAAEIGGCFAFWSVLRLGKNPLWLAPGLVSLVVFAWLLTRSEATYAGRAYA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCHHH
AYGGVYIAASLVWLWLVEGTRPDRWDLAGALLCLAGAAVILFADRSP
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCH
>Mature Secondary Structure 
ALLLFGLAAAAEIGGCFAFWSVLRLGKNPLWLAPGLVSLVVFAWLLTRSEATYAGRAYA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCHHH
AYGGVYIAASLVWLWLVEGTRPDRWDLAGALLCLAGAAVILFADRSP
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292