Click here to switch to the map view.

The map label for this gene is 37523637

Identifier: 37523637

GI number: 37523637

Start: 4261635

End: 4262420

Strand: Reverse

Name: 37523637

Synonym: gll4068

Alternate gene names: NA

Gene position: 4262420-4261635 (Counterclockwise)

Preceding gene: 37523638

Following gene: 37523636

Centisome position: 91.49

GC content: 60.81

Gene sequence:

>786_bases
GTGCCTGGAAAGTACATCACCACTCAACAGGTCAAACTGTTCATGACGCTGCGCAATCAGGGTGCCCAGCAGCAAACTGC
TGCGGCCAAAGCCGGCTTTTCGACCCGCACTGCTCACCGTATTGAGCAAGGCACCCACCAGCCCCATCACTGTCAGCCGC
GAAGTTACAGAACCCGTCCGGACCCGTTGGCCGAGGTCTGGCACTCAGAACTGATACCCTTACTGCGCCGCACGCCCAGC
CTCAAGCCGATGACGCTGTGGGAACACCTGCAAAAGCTCTACCCCGGCCAGTATCCGCGCAAAGTCCTGCGCACCCTGGA
GCGACGGGTGCGTGAATGGCCGGCTCTCGAAGGACCACCTAAGGAAGTCATGTTCCGCCAGGAACACCTGCCGGGGGTGA
TGGGGCTGTCCGACTTCACAAAGCTCAAGCAGGCGGTTGTCACCATCGGCGGTCGGCCATTTACTCACCTGCTCTACCAC
TTTCGCCTGGCCTATAGCGGCTGGAGCTATGTACAAGTTGTCCAAGGCGGTGAGAGCTTCGCCGCTTTGTCCGAGGGGTT
GCAGAATGCACTGTGGAAGTTGGGCGGCTGCCCCGCCGAGCACCGCACCGATAGTCTTTCGGCCGCTTTCCACAATTTGC
TGCCGCGCACCATCGAGGATCTGAGCCTTGCCTACGACGGGTTGTGTCTGCACTACCGCATGGCCCCCAGCCGCAATAAT
CGGGGAAAGGGCCACGAGAACGGCTCAGTTGAATCGTCCTCAGGGGCGTTGCCCCAACGCCCCTGA

Upstream 100 bases:

>100_bases
TGTTGCGCGACAATTACCTTGGCTGACGTTCGGTAGGTAACCCCGCGCAGCCGGATCGGCGACTCTTGCTCCATCGTCTC
GTTATCGATGGGGCTAGGTT

Downstream 100 bases:

>100_bases
GGTCACTTCAAGCGGCGGCTGGTGCAGGCGATGCTCTTGCGCGGCTCGTTCGACTTTGCCTCGGTGGCCGAGTATCAGAC
GCTCATCGACGAAGTGATTG

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MPGKYITTQQVKLFMTLRNQGAQQQTAAAKAGFSTRTAHRIEQGTHQPHHCQPRSYRTRPDPLAEVWHSELIPLLRRTPS
LKPMTLWEHLQKLYPGQYPRKVLRTLERRVREWPALEGPPKEVMFRQEHLPGVMGLSDFTKLKQAVVTIGGRPFTHLLYH
FRLAYSGWSYVQVVQGGESFAALSEGLQNALWKLGGCPAEHRTDSLSAAFHNLLPRTIEDLSLAYDGLCLHYRMAPSRNN
RGKGHENGSVESSSGALPQRP

Sequences:

>Translated_261_residues
MPGKYITTQQVKLFMTLRNQGAQQQTAAAKAGFSTRTAHRIEQGTHQPHHCQPRSYRTRPDPLAEVWHSELIPLLRRTPS
LKPMTLWEHLQKLYPGQYPRKVLRTLERRVREWPALEGPPKEVMFRQEHLPGVMGLSDFTKLKQAVVTIGGRPFTHLLYH
FRLAYSGWSYVQVVQGGESFAALSEGLQNALWKLGGCPAEHRTDSLSAAFHNLLPRTIEDLSLAYDGLCLHYRMAPSRNN
RGKGHENGSVESSSGALPQRP
>Mature_260_residues
PGKYITTQQVKLFMTLRNQGAQQQTAAAKAGFSTRTAHRIEQGTHQPHHCQPRSYRTRPDPLAEVWHSELIPLLRRTPSL
KPMTLWEHLQKLYPGQYPRKVLRTLERRVREWPALEGPPKEVMFRQEHLPGVMGLSDFTKLKQAVVTIGGRPFTHLLYHF
RLAYSGWSYVQVVQGGESFAALSEGLQNALWKLGGCPAEHRTDSLSAAFHNLLPRTIEDLSLAYDGLCLHYRMAPSRNNR
GKGHENGSVESSSGALPQRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 29548; Mature: 29417

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGKYITTQQVKLFMTLRNQGAQQQTAAAKAGFSTRTAHRIEQGTHQPHHCQPRSYRTRP
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
DPLAEVWHSELIPLLRRTPSLKPMTLWEHLQKLYPGQYPRKVLRTLERRVREWPALEGPP
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCH
KEVMFRQEHLPGVMGLSDFTKLKQAVVTIGGRPFTHLLYHFRLAYSGWSYVQVVQGGESF
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHH
AALSEGLQNALWKLGGCPAEHRTDSLSAAFHNLLPRTIEDLSLAYDGLCLHYRMAPSRNN
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCC
RGKGHENGSVESSSGALPQRP
CCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PGKYITTQQVKLFMTLRNQGAQQQTAAAKAGFSTRTAHRIEQGTHQPHHCQPRSYRTRP
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
DPLAEVWHSELIPLLRRTPSLKPMTLWEHLQKLYPGQYPRKVLRTLERRVREWPALEGPP
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCH
KEVMFRQEHLPGVMGLSDFTKLKQAVVTIGGRPFTHLLYHFRLAYSGWSYVQVVQGGESF
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHH
AALSEGLQNALWKLGGCPAEHRTDSLSAAFHNLLPRTIEDLSLAYDGLCLHYRMAPSRNN
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCC
RGKGHENGSVESSSGALPQRP
CCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]