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The map label for this gene is ygeK [C]

Identifier: 37523606

GI number: 37523606

Start: 4235967

End: 4236239

Strand: Reverse

Name: ygeK [C]

Synonym: gsl4037

Alternate gene names: 37523606

Gene position: 4236239-4235967 (Counterclockwise)

Preceding gene: 37523607

Following gene: 37523605

Centisome position: 90.93

GC content: 55.31

Gene sequence:

>273_bases
ATGCCTGAGACCCGCGTGTCTAGCGAATCCCTCTCTGACCGGGAGATGCAGATTCTGGAATTGGTGGCCCAGGGCCATAC
CAATGAAGACATTGCGGAAGTTTTGGAGATCAGCAAACGTACGGTGGACAACCACGTGAGCAATATTCTTCAGAAGACCA
AGACCAAAAACCGTGTCGAGCTGGTGCGCTGGGCTTTGCAGTGGGGCAAAGTCTGCATCGATGAAGTCAACTGCTGCAGC
CTGCGCTATGGTAACGGTCCGGCCGCCGGCTGA

Upstream 100 bases:

>100_bases
AACTGCCCGAGTCGGCCATCGAGATCTGAGCCGAAGATCCTCAATTTCGGCAGATCCCGTAGAATGTAAGTGAACGTGAA
TTTATACCTACTCGATCACC

Downstream 100 bases:

>100_bases
AAAGATGCGTCTTTATCTTCCGGGTTGGCCCTTTGCCAGTTGCCGCGAGTGCGCCGTGCATATCGCCCAATTGGGTGTCG
AATCGCAGATCGTGCTGCGC

Product: LuxR family transcriptional regulatory protein

Products: NA

Alternate protein names: Transcriptional Regulator; Two Component LuxR Family Transcriptional Regulator; Transcriptional Regulator LuxR Family; LuxR Transcriptional Regulator; Transcriptional Regulator LuxR Family Protein; Response Regulator Like-Protein; LuxR Family Two Component Transcriptional Regulator; LuxR Family Transcriptional Regulatory Protein; Two Component Transcriptional Regulator LuxR Family; Bacterial Regulatory Protein LuxR Family; Two-Component System Response Regulator; Regulatory Protein LuxR; Sigma-70 Region 4 Family

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MPETRVSSESLSDREMQILELVAQGHTNEDIAEVLEISKRTVDNHVSNILQKTKTKNRVELVRWALQWGKVCIDEVNCCS
LRYGNGPAAG

Sequences:

>Translated_90_residues
MPETRVSSESLSDREMQILELVAQGHTNEDIAEVLEISKRTVDNHVSNILQKTKTKNRVELVRWALQWGKVCIDEVNCCS
LRYGNGPAAG
>Mature_89_residues
PETRVSSESLSDREMQILELVAQGHTNEDIAEVLEISKRTVDNHVSNILQKTKTKNRVELVRWALQWGKVCIDEVNCCSL
RYGNGPAAG

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10111; Mature: 9979

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPETRVSSESLSDREMQILELVAQGHTNEDIAEVLEISKRTVDNHVSNILQKTKTKNRVE
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LVRWALQWGKVCIDEVNCCSLRYGNGPAAG
HHHHHHHHHHHHHCCCCHHEEECCCCCCCC
>Mature Secondary Structure 
PETRVSSESLSDREMQILELVAQGHTNEDIAEVLEISKRTVDNHVSNILQKTKTKNRVE
CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LVRWALQWGKVCIDEVNCCSLRYGNGPAAG
HHHHHHHHHHHHHCCCCHHEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA