Click here to switch to the map view.

The map label for this gene is ycf33

Identifier: 37523600

GI number: 37523600

Start: 4231621

End: 4231824

Strand: Direct

Name: ycf33

Synonym: gvip543

Alternate gene names: NA

Gene position: 4231621-4231824 (Clockwise)

Preceding gene: 37523599

Following gene: 37523601

Centisome position: 90.83

GC content: 59.31

Gene sequence:

>204_bases
ATGGCCAACCAGGACTTCCTCAAGACGATTGCCAAGTACCCGACCTTTCTGGCCGGGGCGCTCTTGGGTATCTTCTTCGC
CGCCTTCGGCTGGGCGAAACCGCTGTTTCGCAAACGCCTCAGCGGGGCACTGGCTATTTTGTTCCTCGTCGGCTTCGTTG
CCTTCGTCGTTCTGACGGTGCGCGCGATGCTGATGCTCGATTAG

Upstream 100 bases:

>100_bases
GTTCTCGCTGCTGCCGCTGCTGGGTCAGGCGATCGGCGTACTGCTCGCCGCTGGAGCGGGCTGGCTGGTCCGCCGCCTGC
TGCTGTCCTAAGATAAAAGC

Downstream 100 bases:

>100_bases
TCCGCTAGCCATCCCCCTTGTGCGGACACACCGCGCAGGGCGCTCCGTTGGCACCCAGTCGCGTGGCGTCCTGATGTCCC
ATGGTGTAGGAGATCCGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MANQDFLKTIAKYPTFLAGALLGIFFAAFGWAKPLFRKRLSGALAILFLVGFVAFVVLTVRAMLMLD

Sequences:

>Translated_67_residues
MANQDFLKTIAKYPTFLAGALLGIFFAAFGWAKPLFRKRLSGALAILFLVGFVAFVVLTVRAMLMLD
>Mature_66_residues
ANQDFLKTIAKYPTFLAGALLGIFFAAFGWAKPLFRKRLSGALAILFLVGFVAFVVLTVRAMLMLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7384; Mature: 7253

Theoretical pI: Translated: 11.23; Mature: 11.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANQDFLKTIAKYPTFLAGALLGIFFAAFGWAKPLFRKRLSGALAILFLVGFVAFVVLTV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAMLMLD
HHHHHCC
>Mature Secondary Structure 
ANQDFLKTIAKYPTFLAGALLGIFFAAFGWAKPLFRKRLSGALAILFLVGFVAFVVLTV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAMLMLD
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA