| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is spkF [H]
Identifier: 37523586
GI number: 37523586
Start: 4219697
End: 4220578
Strand: Direct
Name: spkF [H]
Synonym: glr4017
Alternate gene names: 37523586
Gene position: 4219697-4220578 (Clockwise)
Preceding gene: 37523585
Following gene: 37523587
Centisome position: 90.57
GC content: 60.54
Gene sequence:
>882_bases ATGCCTATCGTCGAATCGATGGTGGTCCAGAATTGTTACCGCCCGGTGCGCCTTTTGGGAGCAAACGGAACGCGGCAGAC CTGGCTTGCGGCGGAGGAAAAGACTGGACAAACCGTGACGCTCAAGGCGCTTTATTTCGGCGAGGGTGCGCTGTGGCAAG ATTTTAAGCTTTTCGAGCGCGAGGCTGAGACGCTGCAGTCACTTTCCCACTCCCGCATCCCCCGCCAGCGCGACGCCTTC TGGTGGGAGCAGCCGGAGGGCAACTACTTTTGTCTCATCCAGGATTTCATCCCCGGCCAGTCGCTGGAGGCAAGTGTGCG CAACCTCGGTCCCCTGCCGGAGGCTGAAGTACGCACCATTGCCGCCGAGGTGCTTGAAATTTTGATCTATCTGCACCGAC AGTCGCCGCCGGTGATCCATCGCGACCTCACCCCCGCCAATCTCATTTGGGGCGAAGACGGACGAATTTATTTGATCGAC TTTGGTGCGGTACAGGCGGTAAGCGCTCCCGAGAAAACGATGACGGTGGTGGGCACCTACCGGCTATATGCCCCCGGAGC AGTTCGAGGGCCGCACGGTCCCTGCGTCAGATCTGTTCGGCCTCGGGGCGACGCTGCTTTTTTTGCTCACCGGGATCAAT CCTGGGGAACTGCCCCGCGAGAACTTTCGGATCCGCCTGGGGGAGAGGGCGAGCGCCGGTCTGAAGCCCTGGCTGGAGCG AATGCTCGATCCCGATTTGCAGTACCGTTTTGCGAGTGCTTGCGCCGCCCACGAAGCACTCGATCGGCAGGAAAATCGGC CTGTGCCGACAGTGAGCGGTCAACCAACCGGCAGCTGCATTGCCCTGAAGCGAACTGCCGAACGACTCACCATCGAGGTT GA
Upstream 100 bases:
>100_bases CTGTACGATGTGCCCGCGGGTGCTTAGCCGCTCGCTGCCTAGGCAAGCCGCAAAGCAGCCAATATACTAAAAAGAACGAC CGGGCTCATACACCTGACCG
Downstream 100 bases:
>100_bases AGGTCGGCGGCTGCAGTTGCGGGATTTCTATGTCGCCCTTGCCCAAATGGCTCTCCAGTTTCCGCAAATGTTCCTGAGTT TCAATCAGGAGAACTCTTCT
Product: serine/threonine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MPIVESMVVQNCYRPVRLLGANGTRQTWLAAEEKTGQTVTLKALYFGEGALWQDFKLFEREAETLQSLSHSRIPRQRDAF WWEQPEGNYFCLIQDFIPGQSLEASVRNLGPLPEAEVRTIAAEVLEILIYLHRQSPPVIHRDLTPANLIWGEDGRIYLID FGAVQAVSAPEKTMTVVGTYRLYAPGAVRGPHGPCVRSVRPRGDAAFFAHRDQSWGTAPRELSDPPGGEGERRSEALAGA NARSRFAVPFCECLRRPRSTRSAGKSACADSERSTNRQLHCPEANCRTTHHRG
Sequences:
>Translated_293_residues MPIVESMVVQNCYRPVRLLGANGTRQTWLAAEEKTGQTVTLKALYFGEGALWQDFKLFEREAETLQSLSHSRIPRQRDAF WWEQPEGNYFCLIQDFIPGQSLEASVRNLGPLPEAEVRTIAAEVLEILIYLHRQSPPVIHRDLTPANLIWGEDGRIYLID FGAVQAVSAPEKTMTVVGTYRLYAPGAVRGPHGPCVRSVRPRGDAAFFAHRDQSWGTAPRELSDPPGGEGERRSEALAGA NARSRFAVPFCECLRRPRSTRSAGKSACADSERSTNRQLHCPEANCRTTHHRG >Mature_292_residues PIVESMVVQNCYRPVRLLGANGTRQTWLAAEEKTGQTVTLKALYFGEGALWQDFKLFEREAETLQSLSHSRIPRQRDAFW WEQPEGNYFCLIQDFIPGQSLEASVRNLGPLPEAEVRTIAAEVLEILIYLHRQSPPVIHRDLTPANLIWGEDGRIYLIDF GAVQAVSAPEKTMTVVGTYRLYAPGAVRGPHGPCVRSVRPRGDAAFFAHRDQSWGTAPRELSDPPGGEGERRSEALAGAN ARSRFAVPFCECLRRPRSTRSAGKSACADSERSTNRQLHCPEANCRTTHHRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI217330634, Length=171, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71981370, Length=190, Percent_Identity=27.8947368421053, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI115532658, Length=190, Percent_Identity=27.8947368421053, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71981364, Length=190, Percent_Identity=27.8947368421053, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71983636, Length=183, Percent_Identity=27.8688524590164, Blast_Score=67, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6325117, Length=135, Percent_Identity=34.8148148148148, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI161077548, Length=106, Percent_Identity=33.9622641509434, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI62512112, Length=106, Percent_Identity=33.9622641509434, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI221329689, Length=106, Percent_Identity=33.9622641509434, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221329685, Length=106, Percent_Identity=33.9622641509434, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221329681, Length=106, Percent_Identity=33.9622641509434, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI281359801, Length=106, Percent_Identity=33.9622641509434, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221329687, Length=106, Percent_Identity=33.9622641509434, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221329683, Length=106, Percent_Identity=33.9622641509434, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR017442 [H]
Pfam domain/function: PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 32709; Mature: 32578
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIVESMVVQNCYRPVRLLGANGTRQTWLAAEEKTGQTVTLKALYFGEGALWQDFKLFER CCHHHHHHHHHHHHCCEEECCCCCCCEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHH EAETLQSLSHSRIPRQRDAFWWEQPEGNYFCLIQDFIPGQSLEASVRNLGPLPEAEVRTI HHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHH AAEVLEILIYLHRQSPPVIHRDLTPANLIWGEDGRIYLIDFGAVQAVSAPEKTMTVVGTY HHHHHHHHHHHHCCCCCEEECCCCCCEEEECCCCEEEEEECCCEEECCCCCCEEEEEEEE RLYAPGAVRGPHGPCVRSVRPRGDAAFFAHRDQSWGTAPRELSDPPGGEGERRSEALAGA EEECCCCCCCCCCCHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCC NARSRFAVPFCECLRRPRSTRSAGKSACADSERSTNRQLHCPEANCRTTHHRG CCCCEECCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure PIVESMVVQNCYRPVRLLGANGTRQTWLAAEEKTGQTVTLKALYFGEGALWQDFKLFER CHHHHHHHHHHHHCCEEECCCCCCCEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHH EAETLQSLSHSRIPRQRDAFWWEQPEGNYFCLIQDFIPGQSLEASVRNLGPLPEAEVRTI HHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHH AAEVLEILIYLHRQSPPVIHRDLTPANLIWGEDGRIYLIDFGAVQAVSAPEKTMTVVGTY HHHHHHHHHHHHCCCCCEEECCCCCCEEEECCCCEEEEEECCCEEECCCCCCEEEEEEEE RLYAPGAVRGPHGPCVRSVRPRGDAAFFAHRDQSWGTAPRELSDPPGGEGERRSEALAGA EEECCCCCCCCCCCHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCC NARSRFAVPFCECLRRPRSTRSAGKSACADSERSTNRQLHCPEANCRTTHHRG CCCCEECCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12168951; 8905231 [H]