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The map label for this gene is ycf23

Identifier: 37523575

GI number: 37523575

Start: 4210371

End: 4211120

Strand: Direct

Name: ycf23

Synonym: gvip540

Alternate gene names: NA

Gene position: 4210371-4211120 (Clockwise)

Preceding gene: 37523570

Following gene: 37523576

Centisome position: 90.37

GC content: 68.13

Gene sequence:

>750_bases
ATGGTTGCCATCCTCCAGCAGGCCTTCCAAGCCAAACGAGCCGTCAAGATCATTGCCGGGCTCAACAACTTCGACAGCGC
CCGCGTCGTCCAGATCGTCCGCGCTGCCGAGCGGGGAGGGGCCACCTTCGTCGATATCGCCTGTGACGCCGAACTGATTC
GCCTGGTGCGCCGCAGCACCGATTTGCCCGTGTGCGTCTCCGCCGTCGAACCGCAGGGCCTGCTGATGGCCGTGCGCAGC
GGTGCCGACTGCGTCGAGATCGGCAACTTCGACAGCTTTTATGCCCGTGGGGTCCGCTTCGACGCCGAGGCGGTGCTCGA
TCTGGCCCGCCGCAGCCGCGACCTGCTCGGTTGCGACGTCATGCTCTCGGTGACCGTCCCCCACACCCTGAGCCTCGATG
TACAGGTCAGTCTGGCGGTGCAGCTCGAAGCGCTGGGCGCCGATATCATCCAGACCGAAGGCGGCACCAGCAGCCGACCC
ACCCACCCCGGCACCCTGGGTCTGGTGGAGAAGGCCGCTCCCACCCTGGCTGCGGCCTACGAAATTTCGCGCTCGGTGGG
CGTGCCGGTGCTGTGCGCCTCGGGTCTTTCGGCGGTCACCGTGCCCATGGCCCTCGCCTGCGGCGCGTCGGGCGTCGGCG
TCGGTTCGGCGGTCAACCGCCTGGGCGACGAGGTGGCCATGGTTGCCCAGGTGCGCGCCATCGTCGAAGCGGTCGAGCAA
GCCTGTGTGTTCGAGCGGGTTTCCCCGTGA

Upstream 100 bases:

>100_bases
TTGCGAAGAGCCCGAACCGCCCGCAGGCTTTCTCCACATTATTGCCCTGATTTGGGCGGATCAATTACAATAACCCAGAC
TTTGCACAGGAGCATATCCG

Downstream 100 bases:

>100_bases
AGATCATCCGCGGCGAGCACAACCCCTACCCCTACTCTCCCGCCGTTATCCACGGGGGACTGGTCTACACCGCCGGCCAG
ATCCCCCTGGTGCCCGATAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MVAILQQAFQAKRAVKIIAGLNNFDSARVVQIVRAAERGGATFVDIACDAELIRLVRRSTDLPVCVSAVEPQGLLMAVRS
GADCVEIGNFDSFYARGVRFDAEAVLDLARRSRDLLGCDVMLSVTVPHTLSLDVQVSLAVQLEALGADIIQTEGGTSSRP
THPGTLGLVEKAAPTLAAAYEISRSVGVPVLCASGLSAVTVPMALACGASGVGVGSAVNRLGDEVAMVAQVRAIVEAVEQ
ACVFERVSP

Sequences:

>Translated_249_residues
MVAILQQAFQAKRAVKIIAGLNNFDSARVVQIVRAAERGGATFVDIACDAELIRLVRRSTDLPVCVSAVEPQGLLMAVRS
GADCVEIGNFDSFYARGVRFDAEAVLDLARRSRDLLGCDVMLSVTVPHTLSLDVQVSLAVQLEALGADIIQTEGGTSSRP
THPGTLGLVEKAAPTLAAAYEISRSVGVPVLCASGLSAVTVPMALACGASGVGVGSAVNRLGDEVAMVAQVRAIVEAVEQ
ACVFERVSP
>Mature_249_residues
MVAILQQAFQAKRAVKIIAGLNNFDSARVVQIVRAAERGGATFVDIACDAELIRLVRRSTDLPVCVSAVEPQGLLMAVRS
GADCVEIGNFDSFYARGVRFDAEAVLDLARRSRDLLGCDVMLSVTVPHTLSLDVQVSLAVQLEALGADIIQTEGGTSSRP
THPGTLGLVEKAAPTLAAAYEISRSVGVPVLCASGLSAVTVPMALACGASGVGVGSAVNRLGDEVAMVAQVRAIVEAVEQ
ACVFERVSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25888; Mature: 25888

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAILQQAFQAKRAVKIIAGLNNFDSARVVQIVRAAERGGATFVDIACDAELIRLVRRST
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCC
DLPVCVSAVEPQGLLMAVRSGADCVEIGNFDSFYARGVRFDAEAVLDLARRSRDLLGCDV
CCCEEEECCCCCCEEEEECCCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCEE
MLSVTVPHTLSLDVQVSLAVQLEALGADIIQTEGGTSSRPTHPGTLGLVEKAAPTLAAAY
EEEEECCCEEEEEEEEEEEEEEEHHCCHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EISRSVGVPVLCASGLSAVTVPMALACGASGVGVGSAVNRLGDEVAMVAQVRAIVEAVEQ
HHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACVFERVSP
HHHHHCCCC
>Mature Secondary Structure
MVAILQQAFQAKRAVKIIAGLNNFDSARVVQIVRAAERGGATFVDIACDAELIRLVRRST
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCC
DLPVCVSAVEPQGLLMAVRSGADCVEIGNFDSFYARGVRFDAEAVLDLARRSRDLLGCDV
CCCEEEECCCCCCEEEEECCCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCEE
MLSVTVPHTLSLDVQVSLAVQLEALGADIIQTEGGTSSRPTHPGTLGLVEKAAPTLAAAY
EEEEECCCEEEEEEEEEEEEEEEHHCCHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EISRSVGVPVLCASGLSAVTVPMALACGASGVGVGSAVNRLGDEVAMVAQVRAIVEAVEQ
HHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACVFERVSP
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA