| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37523513
Identifier: 37523513
GI number: 37523513
Start: 4140255
End: 4140782
Strand: Direct
Name: 37523513
Synonym: glr3944
Alternate gene names: NA
Gene position: 4140255-4140782 (Clockwise)
Preceding gene: 37523510
Following gene: 37523521
Centisome position: 88.87
GC content: 52.46
Gene sequence:
>528_bases GTGGGCAAACCCCATATCCAAATTATGTTGCCTTTATTCTACCAACACTTCCTCAAACATCGACTTGCCGAAGACCAGGT CATCTTCCTTCAGCTTCTTGTCCATACTCTCCAATGTCAACAGCACCTCTGCATCCAACGACTTGCCGAGGCGCTTCCCC TGACGATCAAGACCGACAGCAGGCGCAAAGCCATCCAACGCTTTCTGCTGCTTCCCCAACTCAACATCTGGCGCCTCTGG CTGCCCTTGCTTGCCCTGATTATCAACCGCTTTGCCGATAATCCTCATCGCCTTATCCTCGCTTTCGACCGCACCAACTG GTACAAGTACAATCTGCTGATGGTTGCTCTCATCTGGCAAAAACGTGCCATCCCCATTTACTGGCGGCTACTTAATCATG ACGGCAATTCCAGTTTGGCTGAGCGCAGAAGTGTTCTTCGACCTGTTTTCCGATTCTTCCGCTCCAAATCGATCGTGGTC CTCGGGGACCGCGAGTTCGGTTCTGTCGATTTCGCCCGGTGGCTCTAG
Upstream 100 bases:
>100_bases CAATTGCAGTCATTTATTGTTGACGGGGTGACAGAAAGGCTGAAACGCCTGCACCATCTCGCTTTGATGCCTGTAACCTA AAGAAGAAGGGCTTGCCACT
Downstream 100 bases:
>100_bases GCACAGAACGTCGCTTACTGTCTGCGGTTGAAGCAAAGCGAGTGGTAATCCTGGCAATGCCTGGGGAATATCCATCTTGA ACCTAAGTAGACGGGTCAAT
Product: putative transposase
Products: NA
Alternate protein names: Transposase; IS4 Family Transposase
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MGKPHIQIMLPLFYQHFLKHRLAEDQVIFLQLLVHTLQCQQHLCIQRLAEALPLTIKTDSRRKAIQRFLLLPQLNIWRLW LPLLALIINRFADNPHRLILAFDRTNWYKYNLLMVALIWQKRAIPIYWRLLNHDGNSSLAERRSVLRPVFRFFRSKSIVV LGDREFGSVDFARWL
Sequences:
>Translated_175_residues MGKPHIQIMLPLFYQHFLKHRLAEDQVIFLQLLVHTLQCQQHLCIQRLAEALPLTIKTDSRRKAIQRFLLLPQLNIWRLW LPLLALIINRFADNPHRLILAFDRTNWYKYNLLMVALIWQKRAIPIYWRLLNHDGNSSLAERRSVLRPVFRFFRSKSIVV LGDREFGSVDFARWL >Mature_174_residues GKPHIQIMLPLFYQHFLKHRLAEDQVIFLQLLVHTLQCQQHLCIQRLAEALPLTIKTDSRRKAIQRFLLLPQLNIWRLWL PLLALIINRFADNPHRLILAFDRTNWYKYNLLMVALIWQKRAIPIYWRLLNHDGNSSLAERRSVLRPVFRFFRSKSIVVL GDREFGSVDFARWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21005; Mature: 20874
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKPHIQIMLPLFYQHFLKHRLAEDQVIFLQLLVHTLQCQQHLCIQRLAEALPLTIKTDS CCCCHHEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCH RRKAIQRFLLLPQLNIWRLWLPLLALIINRFADNPHRLILAFDRTNWYKYNLLMVALIWQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEHHHHHHHHHHHH KRAIPIYWRLLNHDGNSSLAERRSVLRPVFRFFRSKSIVVLGDREFGSVDFARWL CCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCC >Mature Secondary Structure GKPHIQIMLPLFYQHFLKHRLAEDQVIFLQLLVHTLQCQQHLCIQRLAEALPLTIKTDS CCCHHEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCH RRKAIQRFLLLPQLNIWRLWLPLLALIINRFADNPHRLILAFDRTNWYKYNLLMVALIWQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEHHHHHHHHHHHH KRAIPIYWRLLNHDGNSSLAERRSVLRPVFRFFRSKSIVVLGDREFGSVDFARWL CCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA