| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37523466
Identifier: 37523466
GI number: 37523466
Start: 4103379
End: 4103807
Strand: Direct
Name: 37523466
Synonym: glr3897
Alternate gene names: NA
Gene position: 4103379-4103807 (Clockwise)
Preceding gene: 37523464
Following gene: 37523475
Centisome position: 88.07
GC content: 52.45
Gene sequence:
>429_bases ATGGGTACAGCTGATGACGCCGCTGCATATATTTTGAACAAGCTTGGCGCAATAACAGCTATGAAGTTGCAAAAGCTTCT ATACTACTCCCAAGCTTGGTCTCTTGTGTGGGATGATCATCCTCTGTTTGATGAGCGTATTGAGGCGTGGGCCAACGGAC CTGTGATACCCGCCATCTACGAGCAGCACAGGGGGCAGTACCTGGTGACCGAGTGGTTGGCAGGCAATCCTGGTAACTTA GGCTCTGACGCCATCGAAACAATTGATGCCGTTCTCAAAGTCTACGGGGACAAGTCCTCCCAATGGCTCAGTGACTTGAC CCACAAGGAGGCTCCTTGGCGCGATGCCCGCTTGGGCATTCCAACTGGTGTTCCCTGCAAACAAGAGATCACACAGGCAT CCATGGCAGAGTACTACGGCAGCTTGTAA
Upstream 100 bases:
>100_bases TATTTCTATAATGAACTAGATGTTCACAAAGATATGGACAGGCGTAGTCACATGGGGTTACAATGGTCTCCCAAGTTGCC CTTAGCAAAGAGTGAGAAAG
Downstream 100 bases:
>100_bases AACGTCTGTGAGCCAAGGAAAGAATAAAAAAACTAAGGATCCCAAAATTACTGAGAAGCCTTCCTCGGCTAAGACGCCGC GCTTCGGTAACGACCCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Prophage Protein; Prophage Ps3 Protein; Xin-Antitoxin System Antitoxin Component Xre Family; Prophage Ps3 ; CPW-WPC Domain Protein; Phage-Associated Protein-Like Protein
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MGTADDAAAYILNKLGAITAMKLQKLLYYSQAWSLVWDDHPLFDERIEAWANGPVIPAIYEQHRGQYLVTEWLAGNPGNL GSDAIETIDAVLKVYGDKSSQWLSDLTHKEAPWRDARLGIPTGVPCKQEITQASMAEYYGSL
Sequences:
>Translated_142_residues MGTADDAAAYILNKLGAITAMKLQKLLYYSQAWSLVWDDHPLFDERIEAWANGPVIPAIYEQHRGQYLVTEWLAGNPGNL GSDAIETIDAVLKVYGDKSSQWLSDLTHKEAPWRDARLGIPTGVPCKQEITQASMAEYYGSL >Mature_141_residues GTADDAAAYILNKLGAITAMKLQKLLYYSQAWSLVWDDHPLFDERIEAWANGPVIPAIYEQHRGQYLVTEWLAGNPGNLG SDAIETIDAVLKVYGDKSSQWLSDLTHKEAPWRDARLGIPTGVPCKQEITQASMAEYYGSL
Specific function: Unknown
COG id: COG3600
COG function: function code S; Uncharacterized phage-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15786; Mature: 15655
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTADDAAAYILNKLGAITAMKLQKLLYYSQAWSLVWDDHPLFDERIEAWANGPVIPAIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHH EQHRGQYLVTEWLAGNPGNLGSDAIETIDAVLKVYGDKSSQWLSDLTHKEAPWRDARLGI HHHCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC PTGVPCKQEITQASMAEYYGSL CCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure GTADDAAAYILNKLGAITAMKLQKLLYYSQAWSLVWDDHPLFDERIEAWANGPVIPAIY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHH EQHRGQYLVTEWLAGNPGNLGSDAIETIDAVLKVYGDKSSQWLSDLTHKEAPWRDARLGI HHHCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC PTGVPCKQEITQASMAEYYGSL CCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA