| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is 37523461
Identifier: 37523461
GI number: 37523461
Start: 4099215
End: 4099730
Strand: Direct
Name: 37523461
Synonym: glr3892
Alternate gene names: NA
Gene position: 4099215-4099730 (Clockwise)
Preceding gene: 37523460
Following gene: 37523462
Centisome position: 87.98
GC content: 62.21
Gene sequence:
>516_bases GTGTCGCCTAACGTGTCGCCCTCCTGTCACCCGCCCTCATCCATCCATGTCCGGCAAAAAGCCATCGCCCTTCTTGCTGG TGGCGCCACCATGGCCGATGTCGCTCGGCAAATCGGCGTCGCCGAGCGCACCCTCCAGCGATGGATGAAAAGACCTGATT TTGCCGCCGAGGTCGAACATTCCCGAACCACGCAGACCCGCGCCGTCGCAAAGGTGACAGCCGAAGACTTGGGTAGGCAG TACGCCGCGCTCTTGCCTCTCGCTCTGAGCACAATCCATGAATTGATGACCGACGCCAGGACAAAGCCGGAAGTGCGCCT GCGGGCGGCCGTCCAAACACTCACCCTCGCCGGTCTGGCACTCCGACAGGCTGTCGAACCGGCTACCGCGCCGAGCTATG TGGCCGTTTTGCCGGAGGAGGACGATCGGGATTGGTCGGACCCGAATAAACCCAAGTTCATGACCAAAGAACGCCGGGAC GCGGTCATGGAGGCGGCCTTTTTGGATCTGGGCTGA
Upstream 100 bases:
>100_bases TGCAGGGAGCGATCGCCCGACTGCAGGCCGACCTAGACGCGGACCATGTCGCTACTGCAATGCCCCCGGAGAGCGGGGTT TAGCATTGTCGTGTCGCTCA
Downstream 100 bases:
>100_bases GTAGTTCGAGCTACAGCAATGCCCCCCAAGATCGGCATGCATACTAGGTTTCACTGGCTTCCTGCTCCCCTTCCCCCCGT AGCCAGAGTCCAAGATCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSPNVSPSCHPPSSIHVRQKAIALLAGGATMADVARQIGVAERTLQRWMKRPDFAAEVEHSRTTQTRAVAKVTAEDLGRQ YAALLPLALSTIHELMTDARTKPEVRLRAAVQTLTLAGLALRQAVEPATAPSYVAVLPEEDDRDWSDPNKPKFMTKERRD AVMEAAFLDLG
Sequences:
>Translated_171_residues MSPNVSPSCHPPSSIHVRQKAIALLAGGATMADVARQIGVAERTLQRWMKRPDFAAEVEHSRTTQTRAVAKVTAEDLGRQ YAALLPLALSTIHELMTDARTKPEVRLRAAVQTLTLAGLALRQAVEPATAPSYVAVLPEEDDRDWSDPNKPKFMTKERRD AVMEAAFLDLG >Mature_170_residues SPNVSPSCHPPSSIHVRQKAIALLAGGATMADVARQIGVAERTLQRWMKRPDFAAEVEHSRTTQTRAVAKVTAEDLGRQY AALLPLALSTIHELMTDARTKPEVRLRAAVQTLTLAGLALRQAVEPATAPSYVAVLPEEDDRDWSDPNKPKFMTKERRDA VMEAAFLDLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18724; Mature: 18592
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPNVSPSCHPPSSIHVRQKAIALLAGGATMADVARQIGVAERTLQRWMKRPDFAAEVEH CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SRTTQTRAVAKVTAEDLGRQYAALLPLALSTIHELMTDARTKPEVRLRAAVQTLTLAGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LRQAVEPATAPSYVAVLPEEDDRDWSDPNKPKFMTKERRDAVMEAAFLDLG HHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SPNVSPSCHPPSSIHVRQKAIALLAGGATMADVARQIGVAERTLQRWMKRPDFAAEVEH CCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SRTTQTRAVAKVTAEDLGRQYAALLPLALSTIHELMTDARTKPEVRLRAAVQTLTLAGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LRQAVEPATAPSYVAVLPEEDDRDWSDPNKPKFMTKERRDAVMEAAFLDLG HHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA