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The map label for this gene is 37523444

Identifier: 37523444

GI number: 37523444

Start: 4081879

End: 4082292

Strand: Direct

Name: 37523444

Synonym: glr3875

Alternate gene names: NA

Gene position: 4081879-4082292 (Clockwise)

Preceding gene: 37523443

Following gene: 37523455

Centisome position: 87.61

GC content: 57.97

Gene sequence:

>414_bases
GTGAACTACCTTCTCGATACAAACGCTGTGATCGCAGTGATCAAAAATGCCCCGCCCGGCGTCCGAATTCGACTACGAGA
AGTTCTTGCGGCGGAAGCTTCGGTGGCAATTTCCACTATTGCCTTGTTCGAGCTTTGGTATGGCGTGGCTAAGAGTGCAC
GGCGCAAAGAAAATACCGAACGCCTGCGCGCCTTTCTATCCGGCAGTGTGGAAGTGTTCGCCTTTGAGGAGGAGGATGCT
GTCCGTGCGGGCGAATTGCGCGCTGTATTACACGCGGCCGGCACCCCTATCGGTCCTTATGACCTGCTGATGGCTGCCCA
GGCGCAGCGGCACAGCGCAACACTTGTAACCGCCAACGTTGTGGAGTTTGCCCGCGTACCCGGTCTCATCTGGGAGGACT
GGACCGGCACCTGA

Upstream 100 bases:

>100_bases
TCGATGCGTGGTTTGGTGCAATGGATCGTTTTGCCGATGTCCCTTTTATGGAAGAGGGTCGTCAGCAGCCGCCTATGCCC
GAGGCAAAGACTTTGTTTGA

Downstream 100 bases:

>100_bases
TCGATCTCAGCGCTTCGCCTGGCTGGCCCAATCCTGGGGCACCAGGAACACTTCGTACAGTTCAGCCTCCGCTGTACCGG
GCTCGGGGCGGTAATTATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MNYLLDTNAVIAVIKNAPPGVRIRLREVLAAEASVAISTIALFELWYGVAKSARRKENTERLRAFLSGSVEVFAFEEEDA
VRAGELRAVLHAAGTPIGPYDLLMAAQAQRHSATLVTANVVEFARVPGLIWEDWTGT

Sequences:

>Translated_137_residues
MNYLLDTNAVIAVIKNAPPGVRIRLREVLAAEASVAISTIALFELWYGVAKSARRKENTERLRAFLSGSVEVFAFEEEDA
VRAGELRAVLHAAGTPIGPYDLLMAAQAQRHSATLVTANVVEFARVPGLIWEDWTGT
>Mature_137_residues
MNYLLDTNAVIAVIKNAPPGVRIRLREVLAAEASVAISTIALFELWYGVAKSARRKENTERLRAFLSGSVEVFAFEEEDA
VRAGELRAVLHAAGTPIGPYDLLMAAQAQRHSATLVTANVVEFARVPGLIWEDWTGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.nodosus virulence-associated protein C (vapC) [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 14950; Mature: 14950

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYLLDTNAVIAVIKNAPPGVRIRLREVLAAEASVAISTIALFELWYGVAKSARRKENTE
CCEEECCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RLRAFLSGSVEVFAFEEEDAVRAGELRAVLHAAGTPIGPYDLLMAAQAQRHSATLVTANV
HHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEHHHH
VEFARVPGLIWEDWTGT
HHHHHCCCCEECCCCCC
>Mature Secondary Structure
MNYLLDTNAVIAVIKNAPPGVRIRLREVLAAEASVAISTIALFELWYGVAKSARRKENTE
CCEEECCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RLRAFLSGSVEVFAFEEEDAVRAGELRAVLHAAGTPIGPYDLLMAAQAQRHSATLVTANV
HHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEHHHH
VEFARVPGLIWEDWTGT
HHHHHCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]