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The map label for this gene is yedU [C]

Identifier: 37523378

GI number: 37523378

Start: 4016075

End: 4017655

Strand: Direct

Name: yedU [C]

Synonym: glr3809

Alternate gene names: 37523378

Gene position: 4016075-4017655 (Clockwise)

Preceding gene: 37523376

Following gene: 37523379

Centisome position: 86.2

GC content: 62.11

Gene sequence:

>1581_bases
ATGATGAAAACCATCTTGATGGTCACCAGCAGCCACGATCGCTTCGAAGGGCCGGACCCCCGACCGACCGGGGTCTGGCT
TGAGGAGTTCGCGGTCCCCTACATGGAACTGCTCGCCCGCAAAATCGGGATCACGGTGGCAAGCCCCAGGGGCGGAGCGA
TGCCCGTCGACCCGCGCAGCAATCCGACTCCTGAGCAGCAACAGCAGTGGCAAGCGGCGATCGAAGCCTCGCGAGCGACC
CTGCCGCTGGCGGGTATGGCCTCGGAGAATTTCGACGCCATCTTCCTGCCGGGCGGGCATGGTCCCATGTTCGACCTGCC
CGACAACCCGGATCTCGCCCGTCTGCTCACCGAATTTTATAAGGCGGGCAAGATCATTGCCGCCATCTGCCACGGCCCGG
CCGGGTTGGTGGGTGCCAGACGTCCCGACGGCGCGCCCCTGGTCGCGGGAGTGACCTTGACTTCTTACACCGCTTCTGAG
GAAGTGGCGGCCGAACTCGACAAGGAAGTGCCCTTCATCCTCGAAGACCGGTTGCGCGCGTTGGGGGCGCATTTCATTGC
CCGCGAAAACAAGGCCGATCATATCGAGCGCGACGGACAGTTCATCACCGGCCAGAACCCCAATTCCAGCACCAGCATCG
CCCGGGCGATCGTCGCCGCCCTCGACAAAGCGCTGCAACCCGAGTTTGCGGCGGTGCCCCGCCAGATAGCAGCAGCGCAG
GAGATCGCTACTTTCCCTGTGCCCACATTCTTGGAAAACATTGTCATTGGCGAGGGCGGGGATCTGTTCGTGACCAGTTA
CGACGACGGCCGCCTCTTCCGGATCTCACCGCAGGGAGACATCGCGGAACTTGCCCGGTTGGACGGCAACGCCGCAGGCA
TCGGTTTTGCTGCGGACGGCAGCTTGCTCGTGGCCGGTTCCGCGGGTAAGACTCAGACGCTCTACCGGGTCGGTCTAGAT
GGCACAGTCGAGTGCTGGATTGAGATGCAAGAAGCGGTCTTTCTGAACGGACTGACCCATCTGGTGGGTGAGCGGTATCT
GGTTGCCGACTCCTACAAAAGTGCCATTTGGGAGGTGGATCTGGCGGCTCGGACGGCGGCGCTCTGGCTTAGCCACGAGC
GGTTGGCCCACGCAAAAGATCCCTTCCATCCGGTACCGATGTTTCCGGGGGCGAACGGACTCAAAATTCACGACGACACT
CTCTACGTGTCCAGTACGCAGCAGCAGATGCTCCTCCGTGTCCCACTGGGTGTTGACTATTCGCCGGGGGAGCTGGAGGT
GTTTATGACCAACCTCAACCTCGACGATTTTGCCTTCGATATCGAGGGCAATATCTTCGGCACCACCCACGTCTACAGCA
GCGTGGTGCGGATCAGCCCCGACCGGCGGGTGAGCGTCGTGGCCGAGGCAGAACAGGGACTCACTGGCAGCACGGCCGTA
GCTTTTGGACGCACAGTCGAAGATCACCGATCGCTCTACGTGACTACCAACGGCGGGGTCAGCTTTTTGAGCGCGGATGC
CGTCCAGCCGGGCCGCATTGTGCGCCTCGATGTTGGGATTGCAGGGTACCGGCGGCCATAA

Upstream 100 bases:

>100_bases
ACGATCGTGCAAGACGGCGGTAACCACCCCTGGATACTGTGGATCTCACCGGCGTGTTTCTATCTCCATAGCCGGGTATT
GCCGGTACAAAGACCGAAAA

Downstream 100 bases:

>100_bases
CTAGCTAGGGAGAACATCAATGCGCTTTGCAATCCTCTGCACCCTGCGCAAAGACAGCGATCCCGCCCGGATGGCGCTGC
GGTTGCGGCATCTTGAGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; DJ-1/PfpI Family; NonF-Related Protein; DJ-1/PfpI-Family Transcriptional Regulator; Peptidase; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase-Like Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; Intracellular Protease/Amidase-Like; C56 Family Peptidase; Amidotransferase; Protease I; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; ThiJ Protein; NonF Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator; DJ-1/PfpI Family Transcriptional Regulator

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MMKTILMVTSSHDRFEGPDPRPTGVWLEEFAVPYMELLARKIGITVASPRGGAMPVDPRSNPTPEQQQQWQAAIEASRAT
LPLAGMASENFDAIFLPGGHGPMFDLPDNPDLARLLTEFYKAGKIIAAICHGPAGLVGARRPDGAPLVAGVTLTSYTASE
EVAAELDKEVPFILEDRLRALGAHFIARENKADHIERDGQFITGQNPNSSTSIARAIVAALDKALQPEFAAVPRQIAAAQ
EIATFPVPTFLENIVIGEGGDLFVTSYDDGRLFRISPQGDIAELARLDGNAAGIGFAADGSLLVAGSAGKTQTLYRVGLD
GTVECWIEMQEAVFLNGLTHLVGERYLVADSYKSAIWEVDLAARTAALWLSHERLAHAKDPFHPVPMFPGANGLKIHDDT
LYVSSTQQQMLLRVPLGVDYSPGELEVFMTNLNLDDFAFDIEGNIFGTTHVYSSVVRISPDRRVSVVAEAEQGLTGSTAV
AFGRTVEDHRSLYVTTNGGVSFLSADAVQPGRIVRLDVGIAGYRRP

Sequences:

>Translated_526_residues
MMKTILMVTSSHDRFEGPDPRPTGVWLEEFAVPYMELLARKIGITVASPRGGAMPVDPRSNPTPEQQQQWQAAIEASRAT
LPLAGMASENFDAIFLPGGHGPMFDLPDNPDLARLLTEFYKAGKIIAAICHGPAGLVGARRPDGAPLVAGVTLTSYTASE
EVAAELDKEVPFILEDRLRALGAHFIARENKADHIERDGQFITGQNPNSSTSIARAIVAALDKALQPEFAAVPRQIAAAQ
EIATFPVPTFLENIVIGEGGDLFVTSYDDGRLFRISPQGDIAELARLDGNAAGIGFAADGSLLVAGSAGKTQTLYRVGLD
GTVECWIEMQEAVFLNGLTHLVGERYLVADSYKSAIWEVDLAARTAALWLSHERLAHAKDPFHPVPMFPGANGLKIHDDT
LYVSSTQQQMLLRVPLGVDYSPGELEVFMTNLNLDDFAFDIEGNIFGTTHVYSSVVRISPDRRVSVVAEAEQGLTGSTAV
AFGRTVEDHRSLYVTTNGGVSFLSADAVQPGRIVRLDVGIAGYRRP
>Mature_526_residues
MMKTILMVTSSHDRFEGPDPRPTGVWLEEFAVPYMELLARKIGITVASPRGGAMPVDPRSNPTPEQQQQWQAAIEASRAT
LPLAGMASENFDAIFLPGGHGPMFDLPDNPDLARLLTEFYKAGKIIAAICHGPAGLVGARRPDGAPLVAGVTLTSYTASE
EVAAELDKEVPFILEDRLRALGAHFIARENKADHIERDGQFITGQNPNSSTSIARAIVAALDKALQPEFAAVPRQIAAAQ
EIATFPVPTFLENIVIGEGGDLFVTSYDDGRLFRISPQGDIAELARLDGNAAGIGFAADGSLLVAGSAGKTQTLYRVGLD
GTVECWIEMQEAVFLNGLTHLVGERYLVADSYKSAIWEVDLAARTAALWLSHERLAHAKDPFHPVPMFPGANGLKIHDDT
LYVSSTQQQMLLRVPLGVDYSPGELEVFMTNLNLDDFAFDIEGNIFGTTHVYSSVVRISPDRRVSVVAEAEQGLTGSTAV
AFGRTVEDHRSLYVTTNGGVSFLSADAVQPGRIVRLDVGIAGYRRP

Specific function: Not Known. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32699045, Length=169, Percent_Identity=30.1775147928994, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI310129235, Length=169, Percent_Identity=30.1775147928994, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI239749942, Length=169, Percent_Identity=30.1775147928994, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI310129239, Length=121, Percent_Identity=33.0578512396694, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI310129233, Length=120, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6320742, Length=232, Percent_Identity=26.7241379310345, Blast_Score=74, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6323984, Length=239, Percent_Identity=26.7782426778243, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324967, Length=239, Percent_Identity=26.7782426778243, Blast_Score=68, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6324975, Length=238, Percent_Identity=27.7310924369748, Blast_Score=68, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56691; Mature: 56691

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKTILMVTSSHDRFEGPDPRPTGVWLEEFAVPYMELLARKIGITVASPRGGAMPVDPRS
CCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCC
NPTPEQQQQWQAAIEASRATLPLAGMASENFDAIFLPGGHGPMFDLPDNPDLARLLTEFY
CCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
KAGKIIAAICHGPAGLVGARRPDGAPLVAGVTLTSYTASEEVAAELDKEVPFILEDRLRA
HCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHH
LGAHFIARENKADHIERDGQFITGQNPNSSTSIARAIVAALDKALQPEFAAVPRQIAAAQ
HHHHHHHCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EIATFPVPTFLENIVIGEGGDLFVTSYDDGRLFRISPQGDIAELARLDGNAAGIGFAADG
HHHCCCCHHHHHHEEECCCCCEEEEEECCCEEEEECCCCCHHHHHHCCCCCCEEEEECCC
SLLVAGSAGKTQTLYRVGLDGTVECWIEMQEAVFLNGLTHLVGERYLVADSYKSAIWEVD
CEEEECCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHEEEE
LAARTAALWLSHERLAHAKDPFHPVPMFPGANGLKIHDDTLYVSSTQQQMLLRVPLGVDY
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCEEEEECCCCEEEEECCCCCCC
SPGELEVFMTNLNLDDFAFDIEGNIFGTTHVYSSVVRISPDRRVSVVAEAEQGLTGSTAV
CCCCEEEEEEECCCCCEEEEECCCEEEHHHHHHHHEEECCCCEEEEEEECCCCCCCCHHH
AFGRTVEDHRSLYVTTNGGVSFLSADAVQPGRIVRLDVGIAGYRRP
EECCEECCCCEEEEEECCCEEEEECCCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MMKTILMVTSSHDRFEGPDPRPTGVWLEEFAVPYMELLARKIGITVASPRGGAMPVDPRS
CCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCC
NPTPEQQQQWQAAIEASRATLPLAGMASENFDAIFLPGGHGPMFDLPDNPDLARLLTEFY
CCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
KAGKIIAAICHGPAGLVGARRPDGAPLVAGVTLTSYTASEEVAAELDKEVPFILEDRLRA
HCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHH
LGAHFIARENKADHIERDGQFITGQNPNSSTSIARAIVAALDKALQPEFAAVPRQIAAAQ
HHHHHHHCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EIATFPVPTFLENIVIGEGGDLFVTSYDDGRLFRISPQGDIAELARLDGNAAGIGFAADG
HHHCCCCHHHHHHEEECCCCCEEEEEECCCEEEEECCCCCHHHHHHCCCCCCEEEEECCC
SLLVAGSAGKTQTLYRVGLDGTVECWIEMQEAVFLNGLTHLVGERYLVADSYKSAIWEVD
CEEEECCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHEEEE
LAARTAALWLSHERLAHAKDPFHPVPMFPGANGLKIHDDTLYVSSTQQQMLLRVPLGVDY
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCEEEEECCCCEEEEECCCCCCC
SPGELEVFMTNLNLDDFAFDIEGNIFGTTHVYSSVVRISPDRRVSVVAEAEQGLTGSTAV
CCCCEEEEEEECCCCCEEEEECCCEEEHHHHHHHHEEECCCCEEEEEEECCCCCCCCHHH
AFGRTVEDHRSLYVTTNGGVSFLSADAVQPGRIVRLDVGIAGYRRP
EECCEECCCCEEEEEECCCEEEEECCCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA