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The map label for this gene is yqhC [C]

Identifier: 37523377

GI number: 37523377

Start: 4015012

End: 4015893

Strand: Reverse

Name: yqhC [C]

Synonym: gll3808

Alternate gene names: 37523377

Gene position: 4015893-4015012 (Counterclockwise)

Preceding gene: 37523381

Following gene: 37523375

Centisome position: 86.2

GC content: 65.76

Gene sequence:

>882_bases
ATGGCTGCCCCCATACCCGGAGAATTCGAATACGATACCGAGAGGGCTCCGGTCCTCACCTCCAAACGGATACACGGATC
CACCGGGATTGAGGTTGTCGAAGCGCTCTGTCCGGCGGGCGAATACCGCCACGGTGCAGCGGCCGCTTTCGTCTTGCGGC
TGGTCCGCCGGGGACATTCTCCCGCGCGCCTGGAACTGGGGGCGGGAGTGTTCGATGCCTACACCCGTTCTGGTGACTTG
CTGTTCAATCCGGCCGGGACGGCAACCCGGTTCGCCATCGAATCACAGCGGCAGATGCTTATCGTTTCGCTGAGCGAGGC
GCTCGTACTGCCGCTTCTCAATGAACAGGGGGCCAATCCCGGGGACCTTGGCCCCTTGCTGCAAAGCCCGCTGCGCAGCG
GATTGCTCACCTCGCTGTGCCTTGCGCTGGGCGAGGAGGCCGACAACGGCGGGCTGCGGGGTGCAACGTTCGCAGAGGCG
ACCGTTACCGCTGCAGTGGCCGAGTTGTTGTTTCTGGCGAAGCAACCCGTCGGCACCGCCGCGCCCACGGCCCCAGTTGC
CCATCGGACAATCGCCCGCTGCCTGGAGCTTATCGAAGCGCGATTGGCCGAACCGTTGTTGCTATCGGAGTTGGCCCAGA
GTGCGGGGATGGGGCGGAGTGCATTTTTGGGTGCCTTTCGGGCGGCTACCGGGCAGTCGCCCCACCAGTACATTCTTAGG
CGGCGGGCGGAGCGGGCCGTAGCGCTGCTGCGCTCGGGAGACCTGCCCCTGGCCGAGGTGGCTCTGCTGGCCGGTTTTGC
GCACCAGGCCCACATGACCAATGTCCTGTCGCGCCTTTACGGCCTGACGCCCGCCCGCATCCGCAACCGGGAGGACCGAT
GA

Upstream 100 bases:

>100_bases
CGCCGTCTTGCACGATCGTCCGCCTACAGCAGGCACCGCGCTTTTTCTGCAAAGCTGGGGGGCGCTGTAGAATCGATGCG
TCCCGGCAAGAATAGCATCG

Downstream 100 bases:

>100_bases
GGTCCGGCTTCTCACTGTTCAAAAACCTGCACAAATAGGACCGGGGGAAAGAGCTATGGCCCTCTCCCCCAGCCTCATCA
TTTCCACAATGCTCGACCCA

Product: AraC family transcription regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; AraC-Family Transcriptional Regulator; AraC Family Transcription Regulator; Transcriptional Regulator

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAAPIPGEFEYDTERAPVLTSKRIHGSTGIEVVEALCPAGEYRHGAAAAFVLRLVRRGHSPARLELGAGVFDAYTRSGDL
LFNPAGTATRFAIESQRQMLIVSLSEALVLPLLNEQGANPGDLGPLLQSPLRSGLLTSLCLALGEEADNGGLRGATFAEA
TVTAAVAELLFLAKQPVGTAAPTAPVAHRTIARCLELIEARLAEPLLLSELAQSAGMGRSAFLGAFRAATGQSPHQYILR
RRAERAVALLRSGDLPLAEVALLAGFAHQAHMTNVLSRLYGLTPARIRNREDR

Sequences:

>Translated_293_residues
MAAPIPGEFEYDTERAPVLTSKRIHGSTGIEVVEALCPAGEYRHGAAAAFVLRLVRRGHSPARLELGAGVFDAYTRSGDL
LFNPAGTATRFAIESQRQMLIVSLSEALVLPLLNEQGANPGDLGPLLQSPLRSGLLTSLCLALGEEADNGGLRGATFAEA
TVTAAVAELLFLAKQPVGTAAPTAPVAHRTIARCLELIEARLAEPLLLSELAQSAGMGRSAFLGAFRAATGQSPHQYILR
RRAERAVALLRSGDLPLAEVALLAGFAHQAHMTNVLSRLYGLTPARIRNREDR
>Mature_292_residues
AAPIPGEFEYDTERAPVLTSKRIHGSTGIEVVEALCPAGEYRHGAAAAFVLRLVRRGHSPARLELGAGVFDAYTRSGDLL
FNPAGTATRFAIESQRQMLIVSLSEALVLPLLNEQGANPGDLGPLLQSPLRSGLLTSLCLALGEEADNGGLRGATFAEAT
VTAAVAELLFLAKQPVGTAAPTAPVAHRTIARCLELIEARLAEPLLLSELAQSAGMGRSAFLGAFRAATGQSPHQYILRR
RAERAVALLRSGDLPLAEVALLAGFAHQAHMTNVLSRLYGLTPARIRNREDR

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31083; Mature: 30952

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPIPGEFEYDTERAPVLTSKRIHGSTGIEVVEALCPAGEYRHGAAAAFVLRLVRRGHS
CCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
PARLELGAGVFDAYTRSGDLLFNPAGTATRFAIESQRQMLIVSLSEALVLPLLNEQGANP
CCEEECCCCHHHHHHCCCCEEECCCCCHHHHHHHHCHHEEEEEHHHHHHHHHHHCCCCCC
GDLGPLLQSPLRSGLLTSLCLALGEEADNGGLRGATFAEATVTAAVAELLFLAKQPVGTA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
APTAPVAHRTIARCLELIEARLAEPLLLSELAQSAGMGRSAFLGAFRAATGQSPHQYILR
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHH
RRAERAVALLRSGDLPLAEVALLAGFAHQAHMTNVLSRLYGLTPARIRNREDR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
>Mature Secondary Structure 
AAPIPGEFEYDTERAPVLTSKRIHGSTGIEVVEALCPAGEYRHGAAAAFVLRLVRRGHS
CCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
PARLELGAGVFDAYTRSGDLLFNPAGTATRFAIESQRQMLIVSLSEALVLPLLNEQGANP
CCEEECCCCHHHHHHCCCCEEECCCCCHHHHHHHHCHHEEEEEHHHHHHHHHHHCCCCCC
GDLGPLLQSPLRSGLLTSLCLALGEEADNGGLRGATFAEATVTAAVAELLFLAKQPVGTA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
APTAPVAHRTIARCLELIEARLAEPLLLSELAQSAGMGRSAFLGAFRAATGQSPHQYILR
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHH
RRAERAVALLRSGDLPLAEVALLAGFAHQAHMTNVLSRLYGLTPARIRNREDR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA