| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is ycf35
Identifier: 37523374
GI number: 37523374
Start: 4012258
End: 4012632
Strand: Reverse
Name: ycf35
Synonym: gvip511
Alternate gene names: NA
Gene position: 4012632-4012258 (Counterclockwise)
Preceding gene: 37523375
Following gene: 37523373
Centisome position: 86.13
GC content: 67.73
Gene sequence:
>375_bases ATGTCCCACTTCACCACCGTCCGCCTCGAACTGAAAAACCGCGCCGTCCTCAAGGCCACCCTTGAGCAATTGGGCTTTAC GGTCGCCCTCGACGCCGCCGTGCGCGGCTACAAGGGCGAGACCACCCGCGCCGATCTGGTCGTGCGCCGCCCCGGCGGCT ACGACATCGGCTTTCGCCGGGTAGGCGACCACCTGGAGATGGTGGCCGACTTCTGGGGTGTAGGCAGCAGCGCCGAGCGG CTGCTTGCACCTATCCGCCAGCGCTACGCCCGCAACGTGCTTATCGAAACGGCCGCCGCCCAGGGCTTTACGGTCGAAAG CGAGCAGGTGGGCGAGGCGGGCGAGGTGCGCGTCGTGATCGCAAGGTGGGCGTGA
Upstream 100 bases:
>100_bases GACACCGAGCTGAGCCAAGAAATCCGGGCCATCGCCGCCCGCCGCGGCCTCGACGCGCTCGAAATCGACGACACTGACCT TGGATAAGCGACACCGGAAC
Downstream 100 bases:
>100_bases TGGCCGAGTACCAGCGCATCGAGTACGTCATCGGCAAAGACGGCAAGATCACCGAGCGGGTCAGCGGCGTCGAAGGCGGG CACTGCACCGAGATAACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSHFTTVRLELKNRAVLKATLEQLGFTVALDAAVRGYKGETTRADLVVRRPGGYDIGFRRVGDHLEMVADFWGVGSSAER LLAPIRQRYARNVLIETAAAQGFTVESEQVGEAGEVRVVIARWA
Sequences:
>Translated_124_residues MSHFTTVRLELKNRAVLKATLEQLGFTVALDAAVRGYKGETTRADLVVRRPGGYDIGFRRVGDHLEMVADFWGVGSSAER LLAPIRQRYARNVLIETAAAQGFTVESEQVGEAGEVRVVIARWA >Mature_123_residues SHFTTVRLELKNRAVLKATLEQLGFTVALDAAVRGYKGETTRADLVVRRPGGYDIGFRRVGDHLEMVADFWGVGSSAERL LAPIRQRYARNVLIETAAAQGFTVESEQVGEAGEVRVVIARWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13689; Mature: 13558
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFTTVRLELKNRAVLKATLEQLGFTVALDAAVRGYKGETTRADLVVRRPGGYDIGFRR CCCEEEEEEEECCCHHHHHHHHHCCCEEEEECHHCCCCCCCCEEEEEEECCCCCCCHHHH VGDHLEMVADFWGVGSSAERLLAPIRQRYARNVLIETAAAQGFTVESEQVGEAGEVRVVI HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHCCCCCCEEEEE ARWA EECC >Mature Secondary Structure SHFTTVRLELKNRAVLKATLEQLGFTVALDAAVRGYKGETTRADLVVRRPGGYDIGFRR CCEEEEEEEECCCHHHHHHHHHCCCEEEEECHHCCCCCCCCEEEEEEECCCCCCCHHHH VGDHLEMVADFWGVGSSAERLLAPIRQRYARNVLIETAAAQGFTVESEQVGEAGEVRVVI HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHCCCCCCEEEEE ARWA EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA