Click here to switch to the map view.

The map label for this gene is ywqD [H]

Identifier: 37523354

GI number: 37523354

Start: 3991484

End: 3993796

Strand: Direct

Name: ywqD [H]

Synonym: glr3785

Alternate gene names: 37523354

Gene position: 3991484-3993796 (Clockwise)

Preceding gene: 37523353

Following gene: 37523355

Centisome position: 85.67

GC content: 51.66

Gene sequence:

>2313_bases
ATGACAAAACAGCCGTTTGCAGACCCCGTCGACAAGCCCGCACAAGTCGTTGAGGAGTCGAGCTTCGATTGGCAAACGTA
CGCCAGGACCATATGGCGCCGACGCTACGCATTTATTGGGGTCTTCGTTGCCACCTTCTCTCTGGCGGCGGCTTATACAT
TTTTGAGCAATCCCGTCTACGAAGGCGAGATGCTTCTGCTGCTTGAGGACAGAAACTCCCAACCGAAGGTGCTGGCGGAT
GAAGCCAGCCCTATGAGCTATTTTGCCAGCAACTCGGCCGATATCAACACCCAGATTGAGGTGTTGCTGCGTCGACCCTT
GATCGAGAAAGCTCTGCGGGTGCTACGTCCAAAATTTCCAGAACTTCTCGATCAGGATGCAGAGGATATCACCAAGCGTC
TCGAGATTATCCGAGAAGAGCGAACGCAAGTCGCCGTCGTCAGCTTCGAAGACACAGATCCACAAGTGGTCAAAGCCATC
CTCGACGAACTATCGCGCACTTACATTGATTACAGCCTTGAGATACAAAAATCGAAGCTCGATGGAGCTATTGCCTTTAT
TGAAAACGAATTGCCCCCTGTCCGCAAAGAGGTTGAACGCGCAGAGGAACAACTACGCACCTTCCGCCGCCAGTACAGCA
TTCTGGATCCGCAAGTGCAGGGAACGGAACTAGCTGCGACCTTGAATACCCTCAACCGTGACTACGAACAATCCAAAGCG
GAACTGGAGGCTAGCAAGGAGCATTATTGGGCATTGAGTGAGAGACTAGGCATCTCTCCAGGTCAGGCGCTGGCGTCGGC
AACATTAAGCAAGGACGGCCCATACCAGGAAAACCTGACCCAGCTGCAAAAAGTAGAAACCCAACTAGCTCTTGAGCAGG
CGCGTTTCCGCGACGACTATCCGGCAGTCCAGAGCCTGAAATCGAAACGCGACCGGCTGCGCCAAGTTCTGGCCAGCCAA
GCCCAGCAAATTCTGGGTGATCGCACAGTCCCAGCCATCGTCTCCGGCGGTGCCTCCTTGCAGGACAGCATTGCTGACAG
CGTGAACAACACAGGTTCGCCAAAAGGGATTACAGATCGCCTCGGTGATCTACAAGTCAATCTCGCGGCGGAGCTCATAA
AAGCAGAAAATGCTTATCGAGTTCAAACTGCTAGAGTTGCAGGTCTGGAAAATGTCAAAAACCGCATGATCGGTCAATTT
AAAGTTGTACCGAGCCTAGCGAAGCGGTATCAAGAATTGGTGCGAGATAGTAATCTTGCCTCAAACAGTCTCAACCGGCT
ACTCGAAAGGTTACAGGAATTACGAATTCAAGCTGCACAGGAGTTGTCACCATGGCGGGTGATCGAACCGGCTGCAATTC
CCGAAAAACCGATCTGGCCGAAACCGCTATTGACCCTCGGAGGCGGTGCACTGCTTGGCCTTGTCTTCGGTTTAGGGATA
GCAAGTCTGCTGGAATCGGTCGATGACCGAGTCAAGTCAATCAGCCAGGCTAAAGAATTACTCAACTTGCCGTTGCTTGG
AGCAATTCCATTTACAGAAGAAGAGGATTTGCAGGCGAGCAGCCAACCCCAATTTTCCAAGGAAAGGCAAAAGCCGGACC
TACCAAAGTCGTCTTTAGAAAAATCGATGCTGCGGGAAGCTTTCCGATCGCTGCTGACCAATCTGCGCTTCTTGAGTTCC
GATCGGAAGCTCAAAGTTTTTGTCGTTTCTTCGTCAATGCCTGGGGAAGGTAAAAGTACCGTTGCAACCAACTTGGCCAA
GGTAGTAGGCGGTCTCAACCGTAAAGCTTTACTCGTAGATGCCGATTTAAGACGGCCCACGGTTTCCAACAAACTCGAAT
TGTCAAATGGCCCCGGCCTTTCGACAGTGCTCGCAGGGGAGATGCACTGGAGCAATTGTGTCAACCAGATTGACGAAAAT
GTCCATGTCCTGACATCCGGTCCCCTGCCGCCCGATCCTGTAGCCTTGCTCGATTCACTACGCATGAAAGAATTAGTAAA
GCAGTGGGGTGAAAGATATGACCTGGTGATCATTGACAGCCCCCCTATGATTGGCTTGGCCGATGCCACTATTCTGACAA
AGTGCGCAGATGGTCTTGTCTTCGTGATTGGTCTAGAAGTGGCTAGAAGGGGTGGTGTCTTGAGCGCCCTTGAACGGTTG
CGCTCCGCATCATTAGTACCAGTTGGTTTTGTCGCCAACGGGGTGCGAAAAGAAGCTGAAGGACGTTCCTACTACACCCA
GCATTACTACCACTACTACGGTCAACCTACACCGGACAAGAATCAGACTGGTACCCGACAACGTAAGAAATAA

Upstream 100 bases:

>100_bases
GACGCTCCTTTGGTGGCGATGTAATTAATGGGGTGAGCACGGTTCTCGGGCCTTTTACCCAGCTTGCCAACGTCGTCGTC
CTATTTAGAGCACTGCGCTA

Downstream 100 bases:

>100_bases
CAATCGACATTGCATCCATGGCCGCTGAAGTCAAAAGGATACTCGCAGCTGTTCTCAACTGGAAAGGAGTAGAGGACACA
ATTCATTGTTTTGAATCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 770; Mature: 769

Protein sequence:

>770_residues
MTKQPFADPVDKPAQVVEESSFDWQTYARTIWRRRYAFIGVFVATFSLAAAYTFLSNPVYEGEMLLLLEDRNSQPKVLAD
EASPMSYFASNSADINTQIEVLLRRPLIEKALRVLRPKFPELLDQDAEDITKRLEIIREERTQVAVVSFEDTDPQVVKAI
LDELSRTYIDYSLEIQKSKLDGAIAFIENELPPVRKEVERAEEQLRTFRRQYSILDPQVQGTELAATLNTLNRDYEQSKA
ELEASKEHYWALSERLGISPGQALASATLSKDGPYQENLTQLQKVETQLALEQARFRDDYPAVQSLKSKRDRLRQVLASQ
AQQILGDRTVPAIVSGGASLQDSIADSVNNTGSPKGITDRLGDLQVNLAAELIKAENAYRVQTARVAGLENVKNRMIGQF
KVVPSLAKRYQELVRDSNLASNSLNRLLERLQELRIQAAQELSPWRVIEPAAIPEKPIWPKPLLTLGGGALLGLVFGLGI
ASLLESVDDRVKSISQAKELLNLPLLGAIPFTEEEDLQASSQPQFSKERQKPDLPKSSLEKSMLREAFRSLLTNLRFLSS
DRKLKVFVVSSSMPGEGKSTVATNLAKVVGGLNRKALLVDADLRRPTVSNKLELSNGPGLSTVLAGEMHWSNCVNQIDEN
VHVLTSGPLPPDPVALLDSLRMKELVKQWGERYDLVIIDSPPMIGLADATILTKCADGLVFVIGLEVARRGGVLSALERL
RSASLVPVGFVANGVRKEAEGRSYYTQHYYHYYGQPTPDKNQTGTRQRKK

Sequences:

>Translated_770_residues
MTKQPFADPVDKPAQVVEESSFDWQTYARTIWRRRYAFIGVFVATFSLAAAYTFLSNPVYEGEMLLLLEDRNSQPKVLAD
EASPMSYFASNSADINTQIEVLLRRPLIEKALRVLRPKFPELLDQDAEDITKRLEIIREERTQVAVVSFEDTDPQVVKAI
LDELSRTYIDYSLEIQKSKLDGAIAFIENELPPVRKEVERAEEQLRTFRRQYSILDPQVQGTELAATLNTLNRDYEQSKA
ELEASKEHYWALSERLGISPGQALASATLSKDGPYQENLTQLQKVETQLALEQARFRDDYPAVQSLKSKRDRLRQVLASQ
AQQILGDRTVPAIVSGGASLQDSIADSVNNTGSPKGITDRLGDLQVNLAAELIKAENAYRVQTARVAGLENVKNRMIGQF
KVVPSLAKRYQELVRDSNLASNSLNRLLERLQELRIQAAQELSPWRVIEPAAIPEKPIWPKPLLTLGGGALLGLVFGLGI
ASLLESVDDRVKSISQAKELLNLPLLGAIPFTEEEDLQASSQPQFSKERQKPDLPKSSLEKSMLREAFRSLLTNLRFLSS
DRKLKVFVVSSSMPGEGKSTVATNLAKVVGGLNRKALLVDADLRRPTVSNKLELSNGPGLSTVLAGEMHWSNCVNQIDEN
VHVLTSGPLPPDPVALLDSLRMKELVKQWGERYDLVIIDSPPMIGLADATILTKCADGLVFVIGLEVARRGGVLSALERL
RSASLVPVGFVANGVRKEAEGRSYYTQHYYHYYGQPTPDKNQTGTRQRKK
>Mature_769_residues
TKQPFADPVDKPAQVVEESSFDWQTYARTIWRRRYAFIGVFVATFSLAAAYTFLSNPVYEGEMLLLLEDRNSQPKVLADE
ASPMSYFASNSADINTQIEVLLRRPLIEKALRVLRPKFPELLDQDAEDITKRLEIIREERTQVAVVSFEDTDPQVVKAIL
DELSRTYIDYSLEIQKSKLDGAIAFIENELPPVRKEVERAEEQLRTFRRQYSILDPQVQGTELAATLNTLNRDYEQSKAE
LEASKEHYWALSERLGISPGQALASATLSKDGPYQENLTQLQKVETQLALEQARFRDDYPAVQSLKSKRDRLRQVLASQA
QQILGDRTVPAIVSGGASLQDSIADSVNNTGSPKGITDRLGDLQVNLAAELIKAENAYRVQTARVAGLENVKNRMIGQFK
VVPSLAKRYQELVRDSNLASNSLNRLLERLQELRIQAAQELSPWRVIEPAAIPEKPIWPKPLLTLGGGALLGLVFGLGIA
SLLESVDDRVKSISQAKELLNLPLLGAIPFTEEEDLQASSQPQFSKERQKPDLPKSSLEKSMLREAFRSLLTNLRFLSSD
RKLKVFVVSSSMPGEGKSTVATNLAKVVGGLNRKALLVDADLRRPTVSNKLELSNGPGLSTVLAGEMHWSNCVNQIDENV
HVLTSGPLPPDPVALLDSLRMKELVKQWGERYDLVIIDSPPMIGLADATILTKCADGLVFVIGLEVARRGGVLSALERLR
SASLVPVGFVANGVRKEAEGRSYYTQHYYHYYGQPTPDKNQTGTRQRKK

Specific function: May be involved in the regulation of capsular polysaccharide biosynthesis. Autophosphorylates in vitro. Phosphorylates and activates in vitro two UDP-glucose dehydrogenases, YwqF and TuaD, as well as the DNA-binding proteins Ssb and SsbB [H]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

Organism=Escherichia coli, GI1787216, Length=371, Percent_Identity=29.9191374663073, Blast_Score=145, Evalue=8e-36,
Organism=Escherichia coli, GI87082032, Length=381, Percent_Identity=27.5590551181102, Blast_Score=137, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 85771; Mature: 85640

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQPFADPVDKPAQVVEESSFDWQTYARTIWRRRYAFIGVFVATFSLAAAYTFLSNPVY
CCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EGEMLLLLEDRNSQPKVLADEASPMSYFASNSADINTQIEVLLRRPLIEKALRVLRPKFP
CCEEEEEEECCCCCCCEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
ELLDQDAEDITKRLEIIREERTQVAVVSFEDTDPQVVKAILDELSRTYIDYSLEIQKSKL
HHHCCCHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEHHHH
DGAIAFIENELPPVRKEVERAEEQLRTFRRQYSILDPQVQGTELAATLNTLNRDYEQSKA
CCHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ELEASKEHYWALSERLGISPGQALASATLSKDGPYQENLTQLQKVETQLALEQARFRDDY
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PAVQSLKSKRDRLRQVLASQAQQILGDRTVPAIVSGGASLQDSIADSVNNTGSPKGITDR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCHHHH
LGDLQVNLAAELIKAENAYRVQTARVAGLENVKNRMIGQFKVVPSLAKRYQELVRDSNLA
HCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SNSLNRLLERLQELRIQAAQELSPWRVIEPAAIPEKPIWPKPLLTLGGGALLGLVFGLGI
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHH
ASLLESVDDRVKSISQAKELLNLPLLGAIPFTEEEDLQASSQPQFSKERQKPDLPKSSLE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCHHHHCCCCCCCHHHHH
KSMLREAFRSLLTNLRFLSSDRKLKVFVVSSSMPGEGKSTVATNLAKVVGGLNRKALLVD
HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEE
ADLRRPTVSNKLELSNGPGLSTVLAGEMHWSNCVNQIDENVHVLTSGPLPPDPVALLDSL
CCCCCCCCCCCEECCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH
RMKELVKQWGERYDLVIIDSPPMIGLADATILTKCADGLVFVIGLEVARRGGVLSALERL
HHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHCCCHHHHHHHH
RSASLVPVGFVANGVRKEAEGRSYYTQHYYHYYGQPTPDKNQTGTRQRKK
HCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKQPFADPVDKPAQVVEESSFDWQTYARTIWRRRYAFIGVFVATFSLAAAYTFLSNPVY
CCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EGEMLLLLEDRNSQPKVLADEASPMSYFASNSADINTQIEVLLRRPLIEKALRVLRPKFP
CCEEEEEEECCCCCCCEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
ELLDQDAEDITKRLEIIREERTQVAVVSFEDTDPQVVKAILDELSRTYIDYSLEIQKSKL
HHHCCCHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEHHHH
DGAIAFIENELPPVRKEVERAEEQLRTFRRQYSILDPQVQGTELAATLNTLNRDYEQSKA
CCHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ELEASKEHYWALSERLGISPGQALASATLSKDGPYQENLTQLQKVETQLALEQARFRDDY
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PAVQSLKSKRDRLRQVLASQAQQILGDRTVPAIVSGGASLQDSIADSVNNTGSPKGITDR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCHHHH
LGDLQVNLAAELIKAENAYRVQTARVAGLENVKNRMIGQFKVVPSLAKRYQELVRDSNLA
HCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SNSLNRLLERLQELRIQAAQELSPWRVIEPAAIPEKPIWPKPLLTLGGGALLGLVFGLGI
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHH
ASLLESVDDRVKSISQAKELLNLPLLGAIPFTEEEDLQASSQPQFSKERQKPDLPKSSLE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCHHHHCCCCCCCHHHHH
KSMLREAFRSLLTNLRFLSSDRKLKVFVVSSSMPGEGKSTVATNLAKVVGGLNRKALLVD
HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEE
ADLRRPTVSNKLELSNGPGLSTVLAGEMHWSNCVNQIDENVHVLTSGPLPPDPVALLDSL
CCCCCCCCCCCEECCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH
RMKELVKQWGERYDLVIIDSPPMIGLADATILTKCADGLVFVIGLEVARRGGVLSALERL
HHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHCCCHHHHHHHH
RSASLVPVGFVANGVRKEAEGRSYYTQHYYHYYGQPTPDKNQTGTRQRKK
HCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]