| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37523349
Identifier: 37523349
GI number: 37523349
Start: 3986105
End: 3987091
Strand: Direct
Name: 37523349
Synonym: glr3780
Alternate gene names: NA
Gene position: 3986105-3987091 (Clockwise)
Preceding gene: 37523348
Following gene: 37523350
Centisome position: 85.56
GC content: 59.37
Gene sequence:
>987_bases ATGACACCCATGATCGAACAGATTGCCCTGGCCATTCGCGATGCCCAGTCGGAAGGCCCACTGCTGCAAGCGGGCAAGGA TGTGTTGACCGGTTTTTCCGGCGACAAACTTGTCGGCGCTCTCCAGCGGCTGGCCCTGCTTTTCGAGCGCGACAGCGCCG GGTGCTACCTGGAAGTGGGCGTCTTTCAGGGATTGACCCTGCTGTCGGTGGCAAGCGCCTGCCGCTCACTGCAATGCTAC GGAATCGACAATTTTGCCTTTTTTGACCCTGAGGGGCAGAACCTGCGCATCGTCAGGGAGCGGGCGGCAAAACTCGCCGT CGGGAATGCTACGGTCATCAACAAAGATTATGAAGATGCTTTGGAGAGCCTTGCCCAGACTACTGGCGGGCGCAAGGTCG GAGTGTACTTTGTGGACGGCCCCCACGACTACCGCAGCCAGCTGATGTGCCTGGAACTGGTGCTACCCCATTTGCATCGC GACGCCGTGATCGTGGTGGACGACAGCAACTACCGCCACGTCCGCCAGGCCAACCGCGATTTTTTGATGACCCATCCGGA GTTTAAGCTGGTCTTTGATGCCTACACCGCCTGTCATCCGGCCAACGCGACGCCAGCGCAACGCCGCGCGGCGCAGGAGG GCTGGTGGAATGGGGTCAACATTCTGGTGCGTGATCCCGAGGGCCTGCTGCCGCCGGCGTACCCACCAACCGAACGTAGC CGCCAGTTATACGAGAACGAGCACATTGTGCACGCAGGGGCTGTTGCAGAACTGGCTCCCCAGGCTACCGAACTGTTGCA ACTGCTGCTGCGCAATCCTCTGCGATTTGTAGCTTCCTCTCTAAGGCTTTATCAGCGCCTGCACGCAAACCGCACAGCCC TTGCAAGCCGCTATCCCCAAATGAATACCTACAGCGCAGATCTTCCTGCTTCCCGTTTCAACACCGCTGTGTTGGCCCCC GAATCCAGGACACGTCCAAACAAATGA
Upstream 100 bases:
>100_bases AGCGCAAGATCAAACAGCCCTCATTGAAGGCCAGACTTGCCGCCCGGGTACGCAGGGCAACGGGAAGCCTTTCTGCCCAC CTCGGTCGCCAGTAGTTACG
Downstream 100 bases:
>100_bases TTTACCCATTGGCTCACAAAGCCTATAGGCACCTGAAGCGGATTGTCTCTACATGTGAGACCGTCGATTTTGGCAAATTC AAGCTCACCATCGATCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MTPMIEQIALAIRDAQSEGPLLQAGKDVLTGFSGDKLVGALQRLALLFERDSAGCYLEVGVFQGLTLLSVASACRSLQCY GIDNFAFFDPEGQNLRIVRERAAKLAVGNATVINKDYEDALESLAQTTGGRKVGVYFVDGPHDYRSQLMCLELVLPHLHR DAVIVVDDSNYRHVRQANRDFLMTHPEFKLVFDAYTACHPANATPAQRRAAQEGWWNGVNILVRDPEGLLPPAYPPTERS RQLYENEHIVHAGAVAELAPQATELLQLLLRNPLRFVASSLRLYQRLHANRTALASRYPQMNTYSADLPASRFNTAVLAP ESRTRPNK
Sequences:
>Translated_328_residues MTPMIEQIALAIRDAQSEGPLLQAGKDVLTGFSGDKLVGALQRLALLFERDSAGCYLEVGVFQGLTLLSVASACRSLQCY GIDNFAFFDPEGQNLRIVRERAAKLAVGNATVINKDYEDALESLAQTTGGRKVGVYFVDGPHDYRSQLMCLELVLPHLHR DAVIVVDDSNYRHVRQANRDFLMTHPEFKLVFDAYTACHPANATPAQRRAAQEGWWNGVNILVRDPEGLLPPAYPPTERS RQLYENEHIVHAGAVAELAPQATELLQLLLRNPLRFVASSLRLYQRLHANRTALASRYPQMNTYSADLPASRFNTAVLAP ESRTRPNK >Mature_327_residues TPMIEQIALAIRDAQSEGPLLQAGKDVLTGFSGDKLVGALQRLALLFERDSAGCYLEVGVFQGLTLLSVASACRSLQCYG IDNFAFFDPEGQNLRIVRERAAKLAVGNATVINKDYEDALESLAQTTGGRKVGVYFVDGPHDYRSQLMCLELVLPHLHRD AVIVVDDSNYRHVRQANRDFLMTHPEFKLVFDAYTACHPANATPAQRRAAQEGWWNGVNILVRDPEGLLPPAYPPTERSR QLYENEHIVHAGAVAELAPQATELLQLLLRNPLRFVASSLRLYQRLHANRTALASRYPQMNTYSADLPASRFNTAVLAPE SRTRPNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36468; Mature: 36337
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPMIEQIALAIRDAQSEGPLLQAGKDVLTGFSGDKLVGALQRLALLFERDSAGCYLEVG CCCHHHHHHHHHHHCCCCCCHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEH VFQGLTLLSVASACRSLQCYGIDNFAFFDPEGQNLRIVRERAAKLAVGNATVINKDYEDA HHCCHHHHHHHHHHHCEEEECCCCEEEECCCCCCCHHHHHHHHHEECCCEEEECCCHHHH LESLAQTTGGRKVGVYFVDGPHDYRSQLMCLELVLPHLHRDAVIVVDDSNYRHVRQANRD HHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCC FLMTHPEFKLVFDAYTACHPANATPAQRRAAQEGWWNGVNILVRDPEGLLPPAYPPTERS EEEECCCEEEEEEHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHH RQLYENEHIVHAGAVAELAPQATELLQLLLRNPLRFVASSLRLYQRLHANRTALASRYPQ HHHHCCCCEEECCHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHCCCC MNTYSADLPASRFNTAVLAPESRTRPNK CCCCCCCCCHHHCCEEEECCCCCCCCCC >Mature Secondary Structure TPMIEQIALAIRDAQSEGPLLQAGKDVLTGFSGDKLVGALQRLALLFERDSAGCYLEVG CCHHHHHHHHHHHCCCCCCHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEH VFQGLTLLSVASACRSLQCYGIDNFAFFDPEGQNLRIVRERAAKLAVGNATVINKDYEDA HHCCHHHHHHHHHHHCEEEECCCCEEEECCCCCCCHHHHHHHHHEECCCEEEECCCHHHH LESLAQTTGGRKVGVYFVDGPHDYRSQLMCLELVLPHLHRDAVIVVDDSNYRHVRQANRD HHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCC FLMTHPEFKLVFDAYTACHPANATPAQRRAAQEGWWNGVNILVRDPEGLLPPAYPPTERS EEEECCCEEEEEEHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHH RQLYENEHIVHAGAVAELAPQATELLQLLLRNPLRFVASSLRLYQRLHANRTALASRYPQ HHHHCCCCEEECCHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHCCCC MNTYSADLPASRFNTAVLAPESRTRPNK CCCCCCCCCHHHCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA