| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is phbB [H]
Identifier: 37523346
GI number: 37523346
Start: 3984545
End: 3985282
Strand: Direct
Name: phbB [H]
Synonym: glr3777
Alternate gene names: 37523346
Gene position: 3984545-3985282 (Clockwise)
Preceding gene: 37523345
Following gene: 37523347
Centisome position: 85.52
GC content: 64.23
Gene sequence:
>738_bases GTGCCGACGACCGCAGTGATCACCGGCGCCAACGGCGGTATCGGACGGGCGCTCTGCTCGGTCTTCAAGGCCGCCGGCCA CCGGGTGGTGGCTCTCGATGTGCAGGAGGGTGAGTGCGAGTGCGATCACTTCGTGCCGGTGGATTTGCAAAAACTATGTC TGGAGGAGAGCTACCGGGATGACTTTCTGGACCGATTGCGCGCCGAGTTGCCCCCTGAGGGGCTCCACGCCCTGATCAAC AACGCCGCTGTCCAACGGCTCGGTGCAACCGGGCAAATCACCCTGGCCGATTGGCGTGAGACCCTCGATGTCAATCTGAC GGCACCGTTTTTGCTCATCCAGGGATTGCTTGGCGAGTTGGAGCGGGCGGGCGGCTCGGTGGTCAATATCGCCAGCGTGC ACGCCAAAGCGACCAAACCCGGCTTCGTCAGCTACGCCACCAGCAAAGCCGCCCTAGTGGGGCTCACCCACAGCCTCGCA GTCGATCTTGGTGCGCGCGTGCGCGTCAACGCCGTCTGCCCGGCAGCAGTGGCTACACCGATGCTCAAAGCCGGCTTCGA GGGCAAAGACCAGCAGTGGCGGGATTTGGCCCGCATGCACCCGCTGGGCCGCATTGCCGAACCCGAAGAAGTAGCCCGTG CGGCGTTGTTTTTAGCCTCGCCGCAGGCAGCATTTGTGAGCGGAACAGCCCTCGACCTCGACGGCGGCATCAGCCACCGC CTGCACGACCCGGTTTAA
Upstream 100 bases:
>100_bases CATTTTCGGCTCCCACAACGCCTCGAACACCGCCGATGCCGTCGAGCGCGCAAGCTTCAAGGCGATGGCGCTGCTGTTCG GTTTTTTGGGGATCGACTGA
Downstream 100 bases:
>100_bases AGCGATGCATGCTACTCCTAAAATCAACCTTATCGATATCGGTGCAGTGGGCGGCCTTGGTCTGCCCTGGCAAGGTCACC AGGACAAGTTGGACTGGGTG
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MPTTAVITGANGGIGRALCSVFKAAGHRVVALDVQEGECECDHFVPVDLQKLCLEESYRDDFLDRLRAELPPEGLHALIN NAAVQRLGATGQITLADWRETLDVNLTAPFLLIQGLLGELERAGGSVVNIASVHAKATKPGFVSYATSKAALVGLTHSLA VDLGARVRVNAVCPAAVATPMLKAGFEGKDQQWRDLARMHPLGRIAEPEEVARAALFLASPQAAFVSGTALDLDGGISHR LHDPV
Sequences:
>Translated_245_residues MPTTAVITGANGGIGRALCSVFKAAGHRVVALDVQEGECECDHFVPVDLQKLCLEESYRDDFLDRLRAELPPEGLHALIN NAAVQRLGATGQITLADWRETLDVNLTAPFLLIQGLLGELERAGGSVVNIASVHAKATKPGFVSYATSKAALVGLTHSLA VDLGARVRVNAVCPAAVATPMLKAGFEGKDQQWRDLARMHPLGRIAEPEEVARAALFLASPQAAFVSGTALDLDGGISHR LHDPV >Mature_244_residues PTTAVITGANGGIGRALCSVFKAAGHRVVALDVQEGECECDHFVPVDLQKLCLEESYRDDFLDRLRAELPPEGLHALINN AAVQRLGATGQITLADWRETLDVNLTAPFLLIQGLLGELERAGGSVVNIASVHAKATKPGFVSYATSKAALVGLTHSLAV DLGARVRVNAVCPAAVATPMLKAGFEGKDQQWRDLARMHPLGRIAEPEEVARAALFLASPQAAFVSGTALDLDGGISHRL HDPV
Specific function: Siderophore biosynthesis; enterobactin biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=171, Percent_Identity=35.672514619883, Blast_Score=104, Evalue=7e-23, Organism=Homo sapiens, GI66933014, Length=225, Percent_Identity=29.7777777777778, Blast_Score=98, Evalue=9e-21, Organism=Homo sapiens, GI15277342, Length=256, Percent_Identity=29.6875, Blast_Score=95, Evalue=7e-20, Organism=Homo sapiens, GI5031737, Length=156, Percent_Identity=36.5384615384615, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI7705925, Length=242, Percent_Identity=33.0578512396694, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=27.7777777777778, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI40254992, Length=247, Percent_Identity=29.1497975708502, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI126723750, Length=146, Percent_Identity=34.9315068493151, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI302344755, Length=100, Percent_Identity=43, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI126723191, Length=100, Percent_Identity=43, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI59889578, Length=222, Percent_Identity=31.0810810810811, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI10190704, Length=161, Percent_Identity=29.1925465838509, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1786812, Length=240, Percent_Identity=33.3333333333333, Blast_Score=108, Evalue=2e-25, Organism=Escherichia coli, GI1787335, Length=239, Percent_Identity=30.1255230125523, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI87082100, Length=245, Percent_Identity=33.0612244897959, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI1790717, Length=242, Percent_Identity=28.5123966942149, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI1787905, Length=262, Percent_Identity=32.0610687022901, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=27.5303643724696, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI2367175, Length=248, Percent_Identity=29.4354838709677, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789208, Length=240, Percent_Identity=25.4166666666667, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1788459, Length=166, Percent_Identity=31.9277108433735, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789378, Length=249, Percent_Identity=25.7028112449799, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI2367365, Length=234, Percent_Identity=26.9230769230769, Blast_Score=64, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17555706, Length=239, Percent_Identity=30.9623430962343, Blast_Score=114, Evalue=6e-26, Organism=Caenorhabditis elegans, GI115534694, Length=242, Percent_Identity=33.4710743801653, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI25147288, Length=243, Percent_Identity=29.2181069958848, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71994600, Length=256, Percent_Identity=29.6875, Blast_Score=90, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17560676, Length=250, Percent_Identity=28.4, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=29.4354838709677, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17561402, Length=172, Percent_Identity=27.3255813953488, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17562904, Length=263, Percent_Identity=27.7566539923954, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17536651, Length=261, Percent_Identity=27.5862068965517, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17560150, Length=254, Percent_Identity=27.9527559055118, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17536025, Length=263, Percent_Identity=28.5171102661597, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17562910, Length=268, Percent_Identity=27.6119402985075, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17531453, Length=260, Percent_Identity=27.6923076923077, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=28.735632183908, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17561272, Length=171, Percent_Identity=30.9941520467836, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17562908, Length=261, Percent_Identity=27.9693486590038, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI72000259, Length=259, Percent_Identity=27.4131274131274, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17562990, Length=254, Percent_Identity=28.3464566929134, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=27.4809160305344, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=143, Percent_Identity=27.972027972028, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI24639444, Length=246, Percent_Identity=29.6747967479675, Blast_Score=109, Evalue=1e-24, Organism=Drosophila melanogaster, GI24643142, Length=241, Percent_Identity=36.5145228215768, Blast_Score=109, Evalue=1e-24, Organism=Drosophila melanogaster, GI24644337, Length=168, Percent_Identity=41.6666666666667, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI21357041, Length=168, Percent_Identity=34.5238095238095, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI28571526, Length=244, Percent_Identity=30.327868852459, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24644339, Length=243, Percent_Identity=30.4526748971193, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI23397609, Length=242, Percent_Identity=28.9256198347107, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI21355319, Length=252, Percent_Identity=27.7777777777778, Blast_Score=78, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011283 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.36 [H]
Molecular weight: Translated: 25927; Mature: 25796
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTAVITGANGGIGRALCSVFKAAGHRVVALDVQEGECECDHFVPVDLQKLCLEESYRD CCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH DFLDRLRAELPPEGLHALINNAAVQRLGATGQITLADWRETLDVNLTAPFLLIQGLLGEL HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHCCCCCHHHHHHHHHHHHH ERAGGSVVNIASVHAKATKPGFVSYATSKAALVGLTHSLAVDLGARVRVNAVCPAAVATP HHCCCCEEEEEEHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHH MLKAGFEGKDQQWRDLARMHPLGRIAEPEEVARAALFLASPQAAFVSGTALDLDGGISHR HHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCEEECCCCCCCC LHDPV CCCCC >Mature Secondary Structure PTTAVITGANGGIGRALCSVFKAAGHRVVALDVQEGECECDHFVPVDLQKLCLEESYRD CCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH DFLDRLRAELPPEGLHALINNAAVQRLGATGQITLADWRETLDVNLTAPFLLIQGLLGEL HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHCCCCCHHHHHHHHHHHHH ERAGGSVVNIASVHAKATKPGFVSYATSKAALVGLTHSLAVDLGARVRVNAVCPAAVATP HHCCCCEEEEEEHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHH MLKAGFEGKDQQWRDLARMHPLGRIAEPEEVARAALFLASPQAAFVSGTALDLDGGISHR HHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCEEECCCCCCCC LHDPV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7582015; 11481430 [H]