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The map label for this gene is pqqE [H]

Identifier: 37523340

GI number: 37523340

Start: 3978642

End: 3979646

Strand: Reverse

Name: pqqE [H]

Synonym: gll3771

Alternate gene names: 37523340

Gene position: 3979646-3978642 (Counterclockwise)

Preceding gene: 37523341

Following gene: 37523339

Centisome position: 85.42

GC content: 62.49

Gene sequence:

>1005_bases
ATGGCTCCGCTGGTCTGCAACTACTACGTCACCTACAAGTGCAACGCCCGTTGCCACTTTTGCGATATCTGGGCGCTGAC
GCCGCCGCCGGAGTCGAGCTACCAGACCATTTGCGCCAACCTGCGCGATCTCAAGCGCCTTGGAGTCAAGTACGTCGACT
TTACCGGCGGCGAGCCGCTCCTGCGGCCCGATATCGTCGAACTTTACGCCGAAGCCAAGCGCCTGGGCCTGATGACCACC
CTAACCACCAACACGATCCTCTACCCCAAAAAAGCCGAGGCGCTGCGGGGGTTGGTCGACTTTTTGAATTTTTCTTTGGA
CGGTCCCGACGCCGCTTCCCACAACCAGTCGCGGGGGGTGGACATCTTTGAGCGGCTGATCGAATCGGTGCATCTGGCGC
GCGCTCTGGGCGAGTACCCGACGCTCAACTTCACCGTCACCGCCCAAAATTTCGCCCGCATCGGCGAGGCGGCCGAACTG
GCCCGCGGCCTGGAGGTGCGCGTCTGGCTCAACCCGGCTTTTACCGCCCACGAACATTACAACAGCGCCAAAAATCCGAC
ACCCGAGATCGTGGCGGCCATCCGCGGCGCGGCCGAGGGCTACCGGGGGACGGTGGGCTACAACCGCGCCGCCCTCGCCT
TGATCGAAGCCGGGGGCAACGACACCGCCAAACCCCGCTGCAAAGCGGTCGATGCGGTGATCGTCATTTCCCCGGACGAC
AAGTTACTGCTGCCTTGTTACCACTTCGCCCAGCACGCGGCTCCCATCGGCGGTCGGCTTTACGATCTCTACACCGAAGG
CGAAAAAGTCCAGGAGTACCGGGCTTCCCAGGGCAAGCTCAAAGTCTGCGAAGGCTGCACAGTCTGGTGCTACTTGATCC
CGAGCTTTTTCAAGGGACTCGACCGCTACACGCTCCTCAACGGCTTCACCTATGCCGACGAGTTCTTTTCGCGCCGCCGG
GGGCGGCGCGGGGTGGCCGCGCGAGCGGTGCTACACTCAAATTAA

Upstream 100 bases:

>100_bases
GTCGAACTGGTGCGCAAGTACCAGCACCCCTACGCCCTTTTCGGTTCCTCCGACGCCGGGGGCGGGGTAGACTGCGTAAA
GTAACCCGCCAGGTGCTCGG

Downstream 100 bases:

>100_bases
CAATTCATTGCCCGCCGGTATGCCTCTGCTCAACCTGGTGCTCGACAACGGCAGCCGCTTTGTGGCGGATGTCGAGAAAC
ATAGTTCCATCGCCCTCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MAPLVCNYYVTYKCNARCHFCDIWALTPPPESSYQTICANLRDLKRLGVKYVDFTGGEPLLRPDIVELYAEAKRLGLMTT
LTTNTILYPKKAEALRGLVDFLNFSLDGPDAASHNQSRGVDIFERLIESVHLARALGEYPTLNFTVTAQNFARIGEAAEL
ARGLEVRVWLNPAFTAHEHYNSAKNPTPEIVAAIRGAAEGYRGTVGYNRAALALIEAGGNDTAKPRCKAVDAVIVISPDD
KLLLPCYHFAQHAAPIGGRLYDLYTEGEKVQEYRASQGKLKVCEGCTVWCYLIPSFFKGLDRYTLLNGFTYADEFFSRRR
GRRGVAARAVLHSN

Sequences:

>Translated_334_residues
MAPLVCNYYVTYKCNARCHFCDIWALTPPPESSYQTICANLRDLKRLGVKYVDFTGGEPLLRPDIVELYAEAKRLGLMTT
LTTNTILYPKKAEALRGLVDFLNFSLDGPDAASHNQSRGVDIFERLIESVHLARALGEYPTLNFTVTAQNFARIGEAAEL
ARGLEVRVWLNPAFTAHEHYNSAKNPTPEIVAAIRGAAEGYRGTVGYNRAALALIEAGGNDTAKPRCKAVDAVIVISPDD
KLLLPCYHFAQHAAPIGGRLYDLYTEGEKVQEYRASQGKLKVCEGCTVWCYLIPSFFKGLDRYTLLNGFTYADEFFSRRR
GRRGVAARAVLHSN
>Mature_333_residues
APLVCNYYVTYKCNARCHFCDIWALTPPPESSYQTICANLRDLKRLGVKYVDFTGGEPLLRPDIVELYAEAKRLGLMTTL
TTNTILYPKKAEALRGLVDFLNFSLDGPDAASHNQSRGVDIFERLIESVHLARALGEYPTLNFTVTAQNFARIGEAAELA
RGLEVRVWLNPAFTAHEHYNSAKNPTPEIVAAIRGAAEGYRGTVGYNRAALALIEAGGNDTAKPRCKAVDAVIVISPDDK
LLLPCYHFAQHAAPIGGRLYDLYTEGEKVQEYRASQGKLKVCEGCTVWCYLIPSFFKGLDRYTLLNGFTYADEFFSRRRG
RRGVAARAVLHSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37110; Mature: 36979

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPLVCNYYVTYKCNARCHFCDIWALTPPPESSYQTICANLRDLKRLGVKYVDFTGGEPL
CCCEEEEEEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCC
LRPDIVELYAEAKRLGLMTTLTTNTILYPKKAEALRGLVDFLNFSLDGPDAASHNQSRGV
CCHHHHHHHHHHHHHCEEEEEECCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
DIFERLIESVHLARALGEYPTLNFTVTAQNFARIGEAAELARGLEVRVWLNPAFTAHEHY
HHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCHHHHHHCCCEEEEEECCCEEHHHHH
NSAKNPTPEIVAAIRGAAEGYRGTVGYNRAALALIEAGGNDTAKPRCKAVDAVIVISPDD
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCC
KLLLPCYHFAQHAAPIGGRLYDLYTEGEKVQEYRASQGKLKVCEGCTVWCYLIPSFFKGL
CEEEHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCCEEEECCCEEHHHHHHHHHHCC
DRYTLLNGFTYADEFFSRRRGRRGVAARAVLHSN
HHHHHHCCCHHHHHHHHHHCCCCCHHHHHEECCC
>Mature Secondary Structure 
APLVCNYYVTYKCNARCHFCDIWALTPPPESSYQTICANLRDLKRLGVKYVDFTGGEPL
CCEEEEEEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCC
LRPDIVELYAEAKRLGLMTTLTTNTILYPKKAEALRGLVDFLNFSLDGPDAASHNQSRGV
CCHHHHHHHHHHHHHCEEEEEECCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
DIFERLIESVHLARALGEYPTLNFTVTAQNFARIGEAAELARGLEVRVWLNPAFTAHEHY
HHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCHHHHHHCCCEEEEEECCCEEHHHHH
NSAKNPTPEIVAAIRGAAEGYRGTVGYNRAALALIEAGGNDTAKPRCKAVDAVIVISPDD
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCC
KLLLPCYHFAQHAAPIGGRLYDLYTEGEKVQEYRASQGKLKVCEGCTVWCYLIPSFFKGL
CEEEHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCCEEEECCCEEHHHHHHHHHHCC
DRYTLLNGFTYADEFFSRRRGRRGVAARAVLHSN
HHHHHHCCCHHHHHHHHHHCCCCCHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11111029 [H]