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The map label for this gene is ictB

Identifier: 37523313

GI number: 37523313

Start: 3954749

End: 3956152

Strand: Reverse

Name: ictB

Synonym: gvip507

Alternate gene names: NA

Gene position: 3956152-3954749 (Counterclockwise)

Preceding gene: 37523319

Following gene: 37523312

Centisome position: 84.91

GC content: 65.24

Gene sequence:

>1404_bases
ATGGCCGTAGTGCAGCATTGGACCACCGGCAGTTTTGTCTGGGGATTTCTTGAATCTCTGGCATTTGCGGATGCGCCGCT
TCAGCGCTGGTGGCGGGCGAGCTTGCCGGGCCGGGTGCAGCAATGGCTGCTGCACTGGGCCGCAAGCGGCATGGCGGCGC
GGGTGGCGGAGCCGGTGGCCATGGGAGTGTTCTGCCTGCTGCTGTTGATTTCGCCTTTTGTGCCCACGGCGGCGGTGGGT
GCGGTGCTGGCCGTGGGTCTTGCTTTGGTGGTCCTGCTTTTCTGCGTGCGCGCCCGGCCGCTCTCGCCGCTCGCTTTGCC
GGTATCGGCCTTTTGGCTGAGCGGCTGGGTGGCGCTGATCGGCTCGCCGCGATTGCTGTCGAGCCTGGATGGCTGGTTGA
AGATGACTCTGTACGCGGCGGGCTTTGCTCTGGGAGCGCACCTGCTGCAAAAGCCGCTTTATCGTACCCTGGCGGTGGGC
ACTTACCTGGCAGCCACCCTGCCGGTATCGATCTATGGGTTATTGCAGTACGTGAACGGTGCCCCGCCCCTGGCCACCTG
GGTGGATCCCGAGTCCCCCCTCGCGGACACTACGCGCGTTTACAGTTTTCTGGGCAACCCGAATCTGCTTGCGGCCTATC
TGATCGCCGCGATCCCGCTCGGGGTGGTGGGGGCGCTGGTTTGGAAAAACTGGGCAGCCAAGGCGATGGCCGCCCTTGCC
GCCGGGGCGGGGGCGCTTTGTCTGGTGCTCACCTACTCGCGCGGCGGCTGGATCGCTCTGACGGCAACCGTTCTGGTGCT
GGCGGTTCTGCTGTGGCCGTGGTTGGCCGAGCGGCTGAAGCCCGAGTGGCGGCTCTGGGTGCCGGTGGTGATCCTGGGGA
CGGTGGCAGCCGCCCTGGTGGTGGCGGTGGTGGCGGTACCGGCGGTGGGCGAGCGGGCTTTGAGCATCTTCGACGGCCGC
GACGATTCGAGCAACAACTTTCGGATCACCGTTTGGGGTGCGGTCTTCGAGATGATCCGCGCCTACCCGCTCACCGGTAT
CGGCCCCGGCAACCTGACTTTCGAAGCGATTTATCCGTTTTTCCAGCGCCCCAAATTCGATGCGCTGAGCGCCTATTCGA
TCGTGCTCGAACTTACGGTCGAATTGGGGATCGTCGGGCTTCTGGCTTTTCTGTGGCTGGCAAGCGCCATGTTGGTGCAG
GGCTTCACTGTCTGGGTGCGGCGTGCGGAACCGGTCGGGGCGCTCTGGTGTGCTGCCGCCACCTGTGCGGTGGTCGGGCT
GTTGGTCAACGGTCTGACCGATACCGTCTGGTTCCGCCCGTCGGTGCAGGTGGTCTGGTGGATGCTGTGCGCCCTCATCG
GCGCGGAATACCTGCGCGCCGCCGGTCAGGCCGATCAAGATTGA

Upstream 100 bases:

>100_bases
CTTAGTGATCCCTGGGGTTGGGGCAGCAATTTTGCCGCCATGCCCCCTGCGCAAGTCCACTTCCTTGCAGTACCTTTGTT
TAGAATCATTCGGAAGGGGC

Downstream 100 bases:

>100_bases
GCTTCGACAGGAGCAGGCAAAATTGTGCAGTGATTCTGCTGGGGAACAGCAGTGCCTGGCTTTGTTCGCTTGCCGCGGGG
TGTGCAAGAATGTCTCTACC

Product: hypothetical protein

Products: NA

Alternate protein names: O-Antigen Polymerase; Inorganic Carbon Transporter; O-Antigen Polymerase Family; Heptosyltransferase Family; IctB Family Bicarbonate Transporter; Integral Membrane Protein; Bicarbonate Transporter ICT Family Protein

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MAVVQHWTTGSFVWGFLESLAFADAPLQRWWRASLPGRVQQWLLHWAASGMAARVAEPVAMGVFCLLLLISPFVPTAAVG
AVLAVGLALVVLLFCVRARPLSPLALPVSAFWLSGWVALIGSPRLLSSLDGWLKMTLYAAGFALGAHLLQKPLYRTLAVG
TYLAATLPVSIYGLLQYVNGAPPLATWVDPESPLADTTRVYSFLGNPNLLAAYLIAAIPLGVVGALVWKNWAAKAMAALA
AGAGALCLVLTYSRGGWIALTATVLVLAVLLWPWLAERLKPEWRLWVPVVILGTVAAALVVAVVAVPAVGERALSIFDGR
DDSSNNFRITVWGAVFEMIRAYPLTGIGPGNLTFEAIYPFFQRPKFDALSAYSIVLELTVELGIVGLLAFLWLASAMLVQ
GFTVWVRRAEPVGALWCAAATCAVVGLLVNGLTDTVWFRPSVQVVWWMLCALIGAEYLRAAGQADQD

Sequences:

>Translated_467_residues
MAVVQHWTTGSFVWGFLESLAFADAPLQRWWRASLPGRVQQWLLHWAASGMAARVAEPVAMGVFCLLLLISPFVPTAAVG
AVLAVGLALVVLLFCVRARPLSPLALPVSAFWLSGWVALIGSPRLLSSLDGWLKMTLYAAGFALGAHLLQKPLYRTLAVG
TYLAATLPVSIYGLLQYVNGAPPLATWVDPESPLADTTRVYSFLGNPNLLAAYLIAAIPLGVVGALVWKNWAAKAMAALA
AGAGALCLVLTYSRGGWIALTATVLVLAVLLWPWLAERLKPEWRLWVPVVILGTVAAALVVAVVAVPAVGERALSIFDGR
DDSSNNFRITVWGAVFEMIRAYPLTGIGPGNLTFEAIYPFFQRPKFDALSAYSIVLELTVELGIVGLLAFLWLASAMLVQ
GFTVWVRRAEPVGALWCAAATCAVVGLLVNGLTDTVWFRPSVQVVWWMLCALIGAEYLRAAGQADQD
>Mature_466_residues
AVVQHWTTGSFVWGFLESLAFADAPLQRWWRASLPGRVQQWLLHWAASGMAARVAEPVAMGVFCLLLLISPFVPTAAVGA
VLAVGLALVVLLFCVRARPLSPLALPVSAFWLSGWVALIGSPRLLSSLDGWLKMTLYAAGFALGAHLLQKPLYRTLAVGT
YLAATLPVSIYGLLQYVNGAPPLATWVDPESPLADTTRVYSFLGNPNLLAAYLIAAIPLGVVGALVWKNWAAKAMAALAA
GAGALCLVLTYSRGGWIALTATVLVLAVLLWPWLAERLKPEWRLWVPVVILGTVAAALVVAVVAVPAVGERALSIFDGRD
DSSNNFRITVWGAVFEMIRAYPLTGIGPGNLTFEAIYPFFQRPKFDALSAYSIVLELTVELGIVGLLAFLWLASAMLVQG
FTVWVRRAEPVGALWCAAATCAVVGLLVNGLTDTVWFRPSVQVVWWMLCALIGAEYLRAAGQADQD

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50179; Mature: 50048

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AVVQHWTTGSFVWGFLESLAFADAPLQRWWRASLPGRVQQWLLHWAASGMAARVAEPVA
CEEECCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHH
MGVFCLLLLISPFVPTAAVGAVLAVGLALVVLLFCVRARPLSPLALPVSAFWLSGWVALI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
GSPRLLSSLDGWLKMTLYAAGFALGAHLLQKPLYRTLAVGTYLAATLPVSIYGLLQYVNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
APPLATWVDPESPLADTTRVYSFLGNPNLLAAYLIAAIPLGVVGALVWKNWAAKAMAALA
CCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGAGALCLVLTYSRGGWIALTATVLVLAVLLWPWLAERLKPEWRLWVPVVILGTVAAALV
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VAVVAVPAVGERALSIFDGRDDSSNNFRITVWGAVFEMIRAYPLTGIGPGNLTFEAIYPF
HHHHHHCCCCHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
FQRPKFDALSAYSIVLELTVELGIVGLLAFLWLASAMLVQGFTVWVRRAEPVGALWCAAA
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
TCAVVGLLVNGLTDTVWFRPSVQVVWWMLCALIGAEYLRAAGQADQD
HHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA