| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is endo I [H]
Identifier: 37523274
GI number: 37523274
Start: 3912671
End: 3915277
Strand: Reverse
Name: endo I [H]
Synonym: gll3705
Alternate gene names: 37523274
Gene position: 3915277-3912671 (Counterclockwise)
Preceding gene: 37523275
Following gene: 37523273
Centisome position: 84.04
GC content: 61.91
Gene sequence:
>2607_bases ATGCCGACATTTCAGCCGCGGGCCGGGCGTCTGGCCGCGGGCGGATTCATTGTACTTGTGTTGTCTTTTTTTCTGGTAAG CCCGGCTGCGGCCGCTCGCAACTGGTGGGTGTTTCTTTCACCCACCGAGGCCGAACTGCTCTACAAAGCGGCGAGTTTCA GCGCGATTAAAAGCGAAGTGGACAACGACTATCTCAACGGTCTGAGTGAACCTAAGACCTGCCTGGATACCCGTTCGCCG TGGGTGCAGCAGATGGCCGCCGCCCAGGAAATGCTCTCAGCCACCTACCTCGCCCTCAAATGGGGCAAATACGGCGGTGC CGACAACAGCGAACTGGACGCCTACCGCGAGCGGATCGCCGACAACTGGAAAGCCATCCTCGAAGCCGGACCGATCGACC TCTGGCAGGACAACTTCGACGGTGTCACGCGCCAGTTCGTCGCCGGCGGCTGCGATTATACCCAGTCCTACCAACCGGGC TGGTACGAGGGGGACATCGCCCTGCGCTTCTGGATATTTGGCGCTCTGCCTTCTTATGATGCGGTGCGCGACGAGCTGAG CACTTCCGAGCGCGAGGCGATCGACACATGGTTGCGGGGATTGGCGGACCAGCTGTGGTCGGGTCGCGATTTTGGTCGGG AGCACAACCGGGGGGCGAGTGCAGTGGCCCAGGCGCACGTGATTGCCCTGGTGCTGCAGGACCGTTCGCGCTTCGAGTCG TACTATTCGCATGCGAGTGGGGGGTTGAAAGATTATTACCGGCAGATGAACTACGCTCCGCTGGCCGGGTGCGACTTTCC CGAACGCCCGGGACTGACCTCTGAACTGGCAAGCCGCGACGGTATTCACGGTGTGCAAACGGTGATGCACAGCTTCGGCG CGCTCGCGGTGATCGCCCACGCGGGGCACATGGGGGGCAACGTCGACTGGAACATCTACAACACCACCCGGGATCCGAAT CTGCTGGCCGGTGTCCTGGGTACCTGGTACGACATCGAAGAGGCCTTGCGCGATGAATTCAACTCCTATATCGTCTGTCT GGAAAATGAGACAGATGCTTCGGAAAGCTTCGAGGACACGAGCCTCGACGAGCGCGTCTGGGCGCCGCTGGCCTTTTTTC AGACCCGCTTTCAGAATGTCGATTCGTGGGGACTGGGCAACCTGCGCGCCTTGAGAAAGGAGCGCGCTTCGCTGCACGCC CAGAACCGGCTGGCCAACCAGAAGCCGACCGTCGAGCTGACCGCGCCCGCCTCCGGCGCAAAATTGACGGCACCGGCCAC GGTCACCCTGAATGCTGAAGCCCGCGACAATAACGGTACTGTGAGCAAAGTCGAGTTTTTCCGCGACAGCACCAAAATTG GCGAGGACCTTGCCAGCCCCTACTCCGCCACCTGGAAGCTCGCAGAAGCTGGAACCTATGCGCTGAAGGCCAAAGTGACC GACAGCCAGGGTGTCACCGCCGATTCCACCTCCCGGACGATCACGGTCTCCCAGCCTTCGGGGTTGTCGGTGTACCTGGT ACAACCCCTCGACGGGGCGTTCGTGGCCGGCGGTTCGGATGCGAAGCTGCAGGCGGTGGCCGCCCACAGTTCCGACAGCA TCAGCAAGGTGGAATTTTATCAAGGTTCCACCAAACTCGGTTCCGACTCGGCAAGCCCCTACTTCTACACCTGGGTCAAG CCCCCGTCGGGCAGCTACTCGTTGACGGCAAAGGCGATCAGCAGCACTGGGGCCACAATCACCTCCAGTGCAATCGATCT GAGCGTCGGCTCACCCAACACTGCGCCGACGGCGAATATGGTCGATCCGGAGGACGGCGCCCAGCTAACGGCTCCCGCGA CGGTCAGCCTCCACGCCGAAGCCGACGACAGCGACGGCACAATCAGCCAAGTCGAGTTTTTCAGCGGCGGCGTCAAACTC GGCCAGGACACCACATCGCCTTACTACTTCAGCTGGAAGGGCATGGCGGCGGGCAAGTATTCGATTGCGGCGGTGGCCAC GGACAACCGGGGGGCCGTGTTTACCTCCGCCGCGGTGGGTGTCACCGTGTCGCTGCCGACTCCCTGGCAACTTAAAGACA TCGGCAATGTCGGCCTGACCGGCAATGCGGCGTTCAACCCCGATAGCGACACCTTCACGATCAAAGCCGCCGGGGCGGAC ATCTGGGGCGATGCCGACGGCTTTATGTATGTCTACCAGCCCATCTCGGGCGATGGGCAATTGGTGGCGCGCGTTTCGAG CCTGGGCAACACCGACAGCTGGGCCAAAGCGGGGATCATGATCCGCGACGGCTTTACCTCCAGTGCCCGCAACGTGTTTG TCGGTCTCACCCCGAGCAAAGGCATCACCTTTCAGTACCGGACCAAGACCGGCGGAGACAGCGGCTCCAAGACCGTCGCC GGCTACAAAGCGCCCTACTGGCTCAAACTGGTGCGCACCGGCGACACGATCAAAGGCTACTACTCCAGCAACGGCGGCAG TTGGGTCTGGATCGGCACCCAGAGCATCCCGATGGCGACGGACCTGTTCATGGGTCTGGCCGTCACCAGCCACGACAGCG CCGAGTTGACGACGGCTGCTTTCACCGATGTGAGCGCCAGCAAGTAA
Upstream 100 bases:
>100_bases TCGCCTTCCGGAAAGTATACGTCGCTCAGACGGCTCCAAAATGGACCCACTCGGGCAGTCATCTTTTCAGATTTAATCAC AAATTCCACCGAGAACTATT
Downstream 100 bases:
>100_bases CCTCGCTCACACGAGAACCGAAAACGTTGAAGCGCCGTCTTGGCTACCGAGGCCGAGGCGGCACCATTTTTTGTCGCTAC GTGGGCTATACCGATGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 868; Mature: 867
Protein sequence:
>868_residues MPTFQPRAGRLAAGGFIVLVLSFFLVSPAAAARNWWVFLSPTEAELLYKAASFSAIKSEVDNDYLNGLSEPKTCLDTRSP WVQQMAAAQEMLSATYLALKWGKYGGADNSELDAYRERIADNWKAILEAGPIDLWQDNFDGVTRQFVAGGCDYTQSYQPG WYEGDIALRFWIFGALPSYDAVRDELSTSEREAIDTWLRGLADQLWSGRDFGREHNRGASAVAQAHVIALVLQDRSRFES YYSHASGGLKDYYRQMNYAPLAGCDFPERPGLTSELASRDGIHGVQTVMHSFGALAVIAHAGHMGGNVDWNIYNTTRDPN LLAGVLGTWYDIEEALRDEFNSYIVCLENETDASESFEDTSLDERVWAPLAFFQTRFQNVDSWGLGNLRALRKERASLHA QNRLANQKPTVELTAPASGAKLTAPATVTLNAEARDNNGTVSKVEFFRDSTKIGEDLASPYSATWKLAEAGTYALKAKVT DSQGVTADSTSRTITVSQPSGLSVYLVQPLDGAFVAGGSDAKLQAVAAHSSDSISKVEFYQGSTKLGSDSASPYFYTWVK PPSGSYSLTAKAISSTGATITSSAIDLSVGSPNTAPTANMVDPEDGAQLTAPATVSLHAEADDSDGTISQVEFFSGGVKL GQDTTSPYYFSWKGMAAGKYSIAAVATDNRGAVFTSAAVGVTVSLPTPWQLKDIGNVGLTGNAAFNPDSDTFTIKAAGAD IWGDADGFMYVYQPISGDGQLVARVSSLGNTDSWAKAGIMIRDGFTSSARNVFVGLTPSKGITFQYRTKTGGDSGSKTVA GYKAPYWLKLVRTGDTIKGYYSSNGGSWVWIGTQSIPMATDLFMGLAVTSHDSAELTTAAFTDVSASK
Sequences:
>Translated_868_residues MPTFQPRAGRLAAGGFIVLVLSFFLVSPAAAARNWWVFLSPTEAELLYKAASFSAIKSEVDNDYLNGLSEPKTCLDTRSP WVQQMAAAQEMLSATYLALKWGKYGGADNSELDAYRERIADNWKAILEAGPIDLWQDNFDGVTRQFVAGGCDYTQSYQPG WYEGDIALRFWIFGALPSYDAVRDELSTSEREAIDTWLRGLADQLWSGRDFGREHNRGASAVAQAHVIALVLQDRSRFES YYSHASGGLKDYYRQMNYAPLAGCDFPERPGLTSELASRDGIHGVQTVMHSFGALAVIAHAGHMGGNVDWNIYNTTRDPN LLAGVLGTWYDIEEALRDEFNSYIVCLENETDASESFEDTSLDERVWAPLAFFQTRFQNVDSWGLGNLRALRKERASLHA QNRLANQKPTVELTAPASGAKLTAPATVTLNAEARDNNGTVSKVEFFRDSTKIGEDLASPYSATWKLAEAGTYALKAKVT DSQGVTADSTSRTITVSQPSGLSVYLVQPLDGAFVAGGSDAKLQAVAAHSSDSISKVEFYQGSTKLGSDSASPYFYTWVK PPSGSYSLTAKAISSTGATITSSAIDLSVGSPNTAPTANMVDPEDGAQLTAPATVSLHAEADDSDGTISQVEFFSGGVKL GQDTTSPYYFSWKGMAAGKYSIAAVATDNRGAVFTSAAVGVTVSLPTPWQLKDIGNVGLTGNAAFNPDSDTFTIKAAGAD IWGDADGFMYVYQPISGDGQLVARVSSLGNTDSWAKAGIMIRDGFTSSARNVFVGLTPSKGITFQYRTKTGGDSGSKTVA GYKAPYWLKLVRTGDTIKGYYSSNGGSWVWIGTQSIPMATDLFMGLAVTSHDSAELTTAAFTDVSASK >Mature_867_residues PTFQPRAGRLAAGGFIVLVLSFFLVSPAAAARNWWVFLSPTEAELLYKAASFSAIKSEVDNDYLNGLSEPKTCLDTRSPW VQQMAAAQEMLSATYLALKWGKYGGADNSELDAYRERIADNWKAILEAGPIDLWQDNFDGVTRQFVAGGCDYTQSYQPGW YEGDIALRFWIFGALPSYDAVRDELSTSEREAIDTWLRGLADQLWSGRDFGREHNRGASAVAQAHVIALVLQDRSRFESY YSHASGGLKDYYRQMNYAPLAGCDFPERPGLTSELASRDGIHGVQTVMHSFGALAVIAHAGHMGGNVDWNIYNTTRDPNL LAGVLGTWYDIEEALRDEFNSYIVCLENETDASESFEDTSLDERVWAPLAFFQTRFQNVDSWGLGNLRALRKERASLHAQ NRLANQKPTVELTAPASGAKLTAPATVTLNAEARDNNGTVSKVEFFRDSTKIGEDLASPYSATWKLAEAGTYALKAKVTD SQGVTADSTSRTITVSQPSGLSVYLVQPLDGAFVAGGSDAKLQAVAAHSSDSISKVEFYQGSTKLGSDSASPYFYTWVKP PSGSYSLTAKAISSTGATITSSAIDLSVGSPNTAPTANMVDPEDGAQLTAPATVSLHAEADDSDGTISQVEFFSGGVKLG QDTTSPYYFSWKGMAAGKYSIAAVATDNRGAVFTSAAVGVTVSLPTPWQLKDIGNVGLTGNAAFNPDSDTFTIKAAGADI WGDADGFMYVYQPISGDGQLVARVSSLGNTDSWAKAGIMIRDGFTSSARNVFVGLTPSKGITFQYRTKTGGDSGSKTVAG YKAPYWLKLVRTGDTIKGYYSSNGGSWVWIGTQSIPMATDLFMGLAVTSHDSAELTTAAFTDVSASK
Specific function: Hydrolyzes chitin oligosaccharides; (GlcNAc)4 to (GlcNAc)2 and (GlcNAc)5,6 to (GlcNAc)2 and (GlcNAc)3. Inactive towards chitin, glucosamine oligosaccharides, glycoproteins and glycopeptides containing (GlcNAc)2 [H]
COG id: COG3979
COG function: function code R; Uncharacterized protein contain chitin-binding domain type 3
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 18 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003610 - InterPro: IPR009470 - InterPro: IPR011583 - InterPro: IPR001223 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02839 CBM_5_12; PF06483 ChiC; PF00704 Glyco_hydro_18 [H]
EC number: =3.2.1.14 [H]
Molecular weight: Translated: 93270; Mature: 93139
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTFQPRAGRLAAGGFIVLVLSFFLVSPAAAARNWWVFLSPTEAELLYKAASFSAIKSEV CCCCCCCCCCEECCHHHHHHHHHHHHCCCHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH DNDYLNGLSEPKTCLDTRSPWVQQMAAAQEMLSATYLALKWGKYGGADNSELDAYRERIA CCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHH DNWKAILEAGPIDLWQDNFDGVTRQFVAGGCDYTQSYQPGWYEGDIALRFWIFGALPSYD HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCEEEEEEEEECCCCHH AVRDELSTSEREAIDTWLRGLADQLWSGRDFGREHNRGASAVAQAHVIALVLQDRSRFES HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEEEEHHHHHHHH YYSHASGGLKDYYRQMNYAPLAGCDFPERPGLTSELASRDGIHGVQTVMHSFGALAVIAH HHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCHHEEEHH AGHMGGNVDWNIYNTTRDPNLLAGVLGTWYDIEEALRDEFNSYIVCLENETDASESFEDT CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC SLDERVWAPLAFFQTRFQNVDSWGLGNLRALRKERASLHAQNRLANQKPTVELTAPASGA CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC KLTAPATVTLNAEARDNNGTVSKVEFFRDSTKIGEDLASPYSATWKLAEAGTYALKAKVT EEECCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCCCHHEEEEECCCCEEEEEEEC DSQGVTADSTSRTITVSQPSGLSVYLVQPLDGAFVAGGSDAKLQAVAAHSSDSISKVEFY CCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEECCCCCEEEEEEECCCCCCEEEEEE QGSTKLGSDSASPYFYTWVKPPSGSYSLTAKAISSTGATITSSAIDLSVGSPNTAPTANM CCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEECEEEEECCCCCCCCCCCC VDPEDGAQLTAPATVSLHAEADDSDGTISQVEFFSGGVKLGQDTTSPYYFSWKGMAAGKY CCCCCCCEEECCEEEEEEECCCCCCCCCEEEEEECCCEEECCCCCCCEEEEECCCCCCCE SIAAVATDNRGAVFTSAAVGVTVSLPTPWQLKDIGNVGLTGNAAFNPDSDTFTIKAAGAD EEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC IWGDADGFMYVYQPISGDGQLVARVSSLGNTDSWAKAGIMIRDGFTSSARNVFVGLTPSK CCCCCCCEEEEEEECCCCCCEEHHHHHCCCCCCHHHCCEEEECCCCCCCCEEEEEECCCC GITFQYRTKTGGDSGSKTVAGYKAPYWLKLVRTGDTIKGYYSSNGGSWVWIGTQSIPMAT CEEEEEEECCCCCCCCCEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCHH DLFMGLAVTSHDSAELTTAAFTDVSASK HHHHHEEEECCCCCCEEEEEECCCCCCC >Mature Secondary Structure PTFQPRAGRLAAGGFIVLVLSFFLVSPAAAARNWWVFLSPTEAELLYKAASFSAIKSEV CCCCCCCCCEECCHHHHHHHHHHHHCCCHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH DNDYLNGLSEPKTCLDTRSPWVQQMAAAQEMLSATYLALKWGKYGGADNSELDAYRERIA CCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHH DNWKAILEAGPIDLWQDNFDGVTRQFVAGGCDYTQSYQPGWYEGDIALRFWIFGALPSYD HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCEEEEEEEEECCCCHH AVRDELSTSEREAIDTWLRGLADQLWSGRDFGREHNRGASAVAQAHVIALVLQDRSRFES HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEEEEHHHHHHHH YYSHASGGLKDYYRQMNYAPLAGCDFPERPGLTSELASRDGIHGVQTVMHSFGALAVIAH HHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCHHEEEHH AGHMGGNVDWNIYNTTRDPNLLAGVLGTWYDIEEALRDEFNSYIVCLENETDASESFEDT CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC SLDERVWAPLAFFQTRFQNVDSWGLGNLRALRKERASLHAQNRLANQKPTVELTAPASGA CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC KLTAPATVTLNAEARDNNGTVSKVEFFRDSTKIGEDLASPYSATWKLAEAGTYALKAKVT EEECCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCCCHHEEEEECCCCEEEEEEEC DSQGVTADSTSRTITVSQPSGLSVYLVQPLDGAFVAGGSDAKLQAVAAHSSDSISKVEFY CCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEECCCCCEEEEEEECCCCCCEEEEEE QGSTKLGSDSASPYFYTWVKPPSGSYSLTAKAISSTGATITSSAIDLSVGSPNTAPTANM CCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEECEEEEECCCCCCCCCCCC VDPEDGAQLTAPATVSLHAEADDSDGTISQVEFFSGGVKLGQDTTSPYYFSWKGMAAGKY CCCCCCCEEECCEEEEEEECCCCCCCCCEEEEEECCCEEECCCCCCCEEEEECCCCCCCE SIAAVATDNRGAVFTSAAVGVTVSLPTPWQLKDIGNVGLTGNAAFNPDSDTFTIKAAGAD EEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC IWGDADGFMYVYQPISGDGQLVARVSSLGNTDSWAKAGIMIRDGFTSSARNVFVGLTPSK CCCCCCCEEEEEEECCCCCCEEHHHHHCCCCCCHHHCCEEEECCCCCCCCEEEEEECCCC GITFQYRTKTGGDSGSKTVAGYKAPYWLKLVRTGDTIKGYYSSNGGSWVWIGTQSIPMAT CEEEEEEECCCCCCCCCEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCHH DLFMGLAVTSHDSAELTTAAFTDVSASK HHHHHEEEECCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969204 [H]