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The map label for this gene is psbO [H]

Identifier: 37523260

GI number: 37523260

Start: 3899564

End: 3900340

Strand: Direct

Name: psbO [H]

Synonym: gvip499

Alternate gene names: 37523260

Gene position: 3899564-3900340 (Clockwise)

Preceding gene: 37523256

Following gene: 37523261

Centisome position: 83.7

GC content: 63.45

Gene sequence:

>777_bases
ATGAGGCACTCAGCGCTTGTTTTGGGGTTGGTCGCGATCAGCGCAGTCTCGCTGACCGGTTGCGGCTCCGATCGTGCACC
CGGCGCGTCGTCGACCGAGTTCGGCTACGCTATCGAGTGCAAAAAGCCCACCGGCGACCGCGCGCCGCTCGAACTGCGGG
CCGGTGAAGTCCGCCAGGCGTACGACCTGTGTTTGCAGCCCAAGAAAATTGCTTACGAGGGCCGCCCTGCCAAGATTATC
TGGGGGCAGACCGCTCCTCTGGGTCCGGTGATCGCCGAATTGCACCAGAACGCGCAGGGCAAGCCCGCCATGGAAGTGAC
CGGTGGGCGCAACACTTATCAGATGACCCTGCAGGTGGGCTCCGAGCGTATCGCCTTCAACTTCAGTGCGAGCGGTCTGG
ACGCCGTGTCGGCCACCCCCCGCAATGTCGTGGATACCTCCACCGACTTTACCGGCGAGCTGGTGGTGCCGTCGCTGCGC
GGCCTGGGTTACACCGATTCGCGCGGTCGGGGCACCGACTACGGCTACGAAAACTCCCAGTCGACCTATGCCAACAGCGG
TGCCGCCTACGACGAAGCCACCAAAGAGTCGCGGGCGCGCGAAACCGGCGAGGGCAGGATGGTCCTCAGCATCGAGAGCG
TCAACTCCCAAACCGGCGAGATCGCCGGCAGCTTCAAAAGCAAGCAGTCCTCGGGTCTGGCGGTTTTGCCCGGCGAAGTG
GATGTCGAAGGTCGCTTCATCGGCACCTTCAAGCCCAAAAAAGAGAGCGCGAGCTAA

Upstream 100 bases:

>100_bases
TGCTTTAGAATATGAGAGCTATTGCAACCATTTGCAATATTTGTCCATTTTTCATTGCCCTTTGCGCCCAGGACCGTACC
TGCGGGGAGGATTTTTCGAG

Downstream 100 bases:

>100_bases
CTTCCCGTTGCTCCGCGGGGCGCACACTATGGCAAAGGAGCCTTCGGGCTCCTTTTTTGCGCATTTTGGCGGGGGAGTCC
CCTTTGACCTTATGATCGAG

Product: photosystem II manganese-stabilizing polypeptide

Products: NA

Alternate protein names: MSP [H]

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MRHSALVLGLVAISAVSLTGCGSDRAPGASSTEFGYAIECKKPTGDRAPLELRAGEVRQAYDLCLQPKKIAYEGRPAKII
WGQTAPLGPVIAELHQNAQGKPAMEVTGGRNTYQMTLQVGSERIAFNFSASGLDAVSATPRNVVDTSTDFTGELVVPSLR
GLGYTDSRGRGTDYGYENSQSTYANSGAAYDEATKESRARETGEGRMVLSIESVNSQTGEIAGSFKSKQSSGLAVLPGEV
DVEGRFIGTFKPKKESAS

Sequences:

>Translated_258_residues
MRHSALVLGLVAISAVSLTGCGSDRAPGASSTEFGYAIECKKPTGDRAPLELRAGEVRQAYDLCLQPKKIAYEGRPAKII
WGQTAPLGPVIAELHQNAQGKPAMEVTGGRNTYQMTLQVGSERIAFNFSASGLDAVSATPRNVVDTSTDFTGELVVPSLR
GLGYTDSRGRGTDYGYENSQSTYANSGAAYDEATKESRARETGEGRMVLSIESVNSQTGEIAGSFKSKQSSGLAVLPGEV
DVEGRFIGTFKPKKESAS
>Mature_258_residues
MRHSALVLGLVAISAVSLTGCGSDRAPGASSTEFGYAIECKKPTGDRAPLELRAGEVRQAYDLCLQPKKIAYEGRPAKII
WGQTAPLGPVIAELHQNAQGKPAMEVTGGRNTYQMTLQVGSERIAFNFSASGLDAVSATPRNVVDTSTDFTGELVVPSLR
GLGYTDSRGRGTDYGYENSQSTYANSGAAYDEATKESRARETGEGRMVLSIESVNSQTGEIAGSFKSKQSSGLAVLPGEV
DVEGRFIGTFKPKKESAS

Specific function: MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002628 [H]

Pfam domain/function: PF01716 MSP [H]

EC number: NA

Molecular weight: Translated: 27267; Mature: 27267

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHSALVLGLVAISAVSLTGCGSDRAPGASSTEFGYAIECKKPTGDRAPLELRAGEVRQA
CCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCHHHHH
YDLCLQPKKIAYEGRPAKIIWGQTAPLGPVIAELHQNAQGKPAMEVTGGRNTYQMTLQVG
HHHHCCCHHEEECCCCEEEEECCCCCCCHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEC
SERIAFNFSASGLDAVSATPRNVVDTSTDFTGELVVPSLRGLGYTDSRGRGTDYGYENSQ
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCHHCCCCCCCCCCCCCCCCCCCCC
STYANSGAAYDEATKESRARETGEGRMVLSIESVNSQTGEIAGSFKSKQSSGLAVLPGEV
CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCEEEECCCE
DVEGRFIGTFKPKKESAS
EECCEEEEECCCCCCCCC
>Mature Secondary Structure
MRHSALVLGLVAISAVSLTGCGSDRAPGASSTEFGYAIECKKPTGDRAPLELRAGEVRQA
CCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCHHHHH
YDLCLQPKKIAYEGRPAKIIWGQTAPLGPVIAELHQNAQGKPAMEVTGGRNTYQMTLQVG
HHHHCCCHHEEECCCCEEEEECCCCCCCHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEC
SERIAFNFSASGLDAVSATPRNVVDTSTDFTGELVVPSLRGLGYTDSRGRGTDYGYENSQ
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCHHCCCCCCCCCCCCCCCCCCCCC
STYANSGAAYDEATKESRARETGEGRMVLSIESVNSQTGEIAGSFKSKQSSGLAVLPGEV
CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCEEEECCCE
DVEGRFIGTFKPKKESAS
EECCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2518833; 11759840 [H]