| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37523256
Identifier: 37523256
GI number: 37523256
Start: 3894243
End: 3895709
Strand: Direct
Name: 37523256
Synonym: glr3687
Alternate gene names: NA
Gene position: 3894243-3895709 (Clockwise)
Preceding gene: 37523255
Following gene: 37523260
Centisome position: 83.59
GC content: 68.78
Gene sequence:
>1467_bases ATGAAAACGTTGTGTTGGGCGCTGACGGCGATGCTCCTGGCCCCGGGAACGGCGGCTACCGCCCAGACGCAGACCCCGCC TCCTCCGGGGCCGCCCCCTTCGGTCAGCTACCCGACCCCGGTCGAGCGCACCCTCGCAAACGGCCTGCGGGTGATCGCCG TGCAGCGCCCGAACGTGCCGCTGGTGGCCGCGCAGTTGATTGTCAAAAGCGGCAGCGAGACCGATCCGCCCGCGCGCCCC GGCATCGCCTCGCTGGCTGCCGACCTGCTCGACAAAGGCACCAAGACCCGCAGCGCCCTGGAGATTGCCCAGGCCATCGA CGCGCTTGGAGCGGAGCTGGAGGCCGGTGCCGGCTTCGATGCGACCCGCGTGGAGGTGAGCGCCACCACACCCCAGTTCG GGCGGGCCTTCGCCATCCTCTCCGAGGTGGTGCGCACCCCCGCCTTTGCCCCCGCTGAAATTGCCCGGGCCAAAACCCAG GCGATCAGCAATCTGCAACTGGCCTACAGCAATCCTTCGGCCCTGGCGCAGCTGGTGGCGCAGCGGCTGATCTACGGCGA AGCCCCCTACGGTCAACCGGCCGAGGGCACCCCCGCATCGCTCGGCGCCATCGCCCGCGCCGACTTGGAGCGCTTCCACC GCACTTACTTCCGGCCGGACAACGCCGTGCTCGTGCTCGGAGGAGACATCGCCCCAGAAGCAGCTTTTGCCGAGGCCGAG CGCGTCTTCGGCAACTGGGCCAAACCCGCCGCCCCACTTCCGGCTTTCCCCGCAGATAAACGCGACACCGCTTCGCGCGT CGTGGTGATCGATCAGCCCGAGGCGGGCCGCACGGCGGTGGCCGTGGGTAAAGCGGTACTCCGCCGCGCCGATCCGGCCT ACATCCTGGGGGTGGTCACCAACGCCGTGATCACCGGTTACTCGGGCCGGCTCAATGCCGAGGTGCGCATCAAGCGGGGA CTGTCCTACGGCGCCGGCGCCAGCCTGGTGGGCCGCCGCGAGCCGGGGCCGTTTGTCGCCGCCACCCTGGTGGATCACGC CAAAGCCGCCGAGGCCACCCAGGTGGTGATCGACACCCTCGCAAGCCTGGTGGGTCAACCTGCAGGGGCTGAAGAACTGA AGCCGCGCAAGGCGGTCATCACCGGCGGCTTCGCCCGTTCGCTCGAAACGATCGACGGCCTGGTGAACCAGGTGGGCACC CTCGCCCTCTACGGCTTGCCCCTGGGGCAGATCAACACCTTCATCGGCGAGGCGGAGGCGGTCACCCCCCTCAAAGTCCA GGAATTTGCCGCGGGCTATCTGCAGTCCAACCAATCGGTGGTGCTGGTGGGCAACGCCAAGGCGTTTCTGCCCGACCTGC GCAAGCGCTTTGCTGAACGCGCCTCCCGCATCGAGGTGATCCCCTTCCAGCGCCTCGATCTTGGCCGGGCGAGCCTGGTG CGTCCCACGGGAGTTGCCGGAAAGTAA
Upstream 100 bases:
>100_bases TCGCCCGCCAGTATCTGGTGCCCACCAACCGCACCGTCATCGACTACCTGCCCCGGGCGATGCAACCGGCCGGACCCACC AAAAAGGAGCGCAAGTCGCC
Downstream 100 bases:
>100_bases CCGCGCCGCGCCAAAGCACGGCGGGCGCGCTCACTCAGCCTGACGCCGCCGGCATCGAGCCGGAAGTCGCTTTCAGGGTG TTTCCGGGCGATTGATCACG
Product: peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MKTLCWALTAMLLAPGTAATAQTQTPPPPGPPPSVSYPTPVERTLANGLRVIAVQRPNVPLVAAQLIVKSGSETDPPARP GIASLAADLLDKGTKTRSALEIAQAIDALGAELEAGAGFDATRVEVSATTPQFGRAFAILSEVVRTPAFAPAEIARAKTQ AISNLQLAYSNPSALAQLVAQRLIYGEAPYGQPAEGTPASLGAIARADLERFHRTYFRPDNAVLVLGGDIAPEAAFAEAE RVFGNWAKPAAPLPAFPADKRDTASRVVVIDQPEAGRTAVAVGKAVLRRADPAYILGVVTNAVITGYSGRLNAEVRIKRG LSYGAGASLVGRREPGPFVAATLVDHAKAAEATQVVIDTLASLVGQPAGAEELKPRKAVITGGFARSLETIDGLVNQVGT LALYGLPLGQINTFIGEAEAVTPLKVQEFAAGYLQSNQSVVLVGNAKAFLPDLRKRFAERASRIEVIPFQRLDLGRASLV RPTGVAGK
Sequences:
>Translated_488_residues MKTLCWALTAMLLAPGTAATAQTQTPPPPGPPPSVSYPTPVERTLANGLRVIAVQRPNVPLVAAQLIVKSGSETDPPARP GIASLAADLLDKGTKTRSALEIAQAIDALGAELEAGAGFDATRVEVSATTPQFGRAFAILSEVVRTPAFAPAEIARAKTQ AISNLQLAYSNPSALAQLVAQRLIYGEAPYGQPAEGTPASLGAIARADLERFHRTYFRPDNAVLVLGGDIAPEAAFAEAE RVFGNWAKPAAPLPAFPADKRDTASRVVVIDQPEAGRTAVAVGKAVLRRADPAYILGVVTNAVITGYSGRLNAEVRIKRG LSYGAGASLVGRREPGPFVAATLVDHAKAAEATQVVIDTLASLVGQPAGAEELKPRKAVITGGFARSLETIDGLVNQVGT LALYGLPLGQINTFIGEAEAVTPLKVQEFAAGYLQSNQSVVLVGNAKAFLPDLRKRFAERASRIEVIPFQRLDLGRASLV RPTGVAGK >Mature_488_residues MKTLCWALTAMLLAPGTAATAQTQTPPPPGPPPSVSYPTPVERTLANGLRVIAVQRPNVPLVAAQLIVKSGSETDPPARP GIASLAADLLDKGTKTRSALEIAQAIDALGAELEAGAGFDATRVEVSATTPQFGRAFAILSEVVRTPAFAPAEIARAKTQ AISNLQLAYSNPSALAQLVAQRLIYGEAPYGQPAEGTPASLGAIARADLERFHRTYFRPDNAVLVLGGDIAPEAAFAEAE RVFGNWAKPAAPLPAFPADKRDTASRVVVIDQPEAGRTAVAVGKAVLRRADPAYILGVVTNAVITGYSGRLNAEVRIKRG LSYGAGASLVGRREPGPFVAATLVDHAKAAEATQVVIDTLASLVGQPAGAEELKPRKAVITGGFARSLETIDGLVNQVGT LALYGLPLGQINTFIGEAEAVTPLKVQEFAAGYLQSNQSVVLVGNAKAFLPDLRKRFAERASRIEVIPFQRLDLGRASLV RPTGVAGK
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI94538354, Length=265, Percent_Identity=24.1509433962264, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI46593007, Length=416, Percent_Identity=22.5961538461538, Blast_Score=65, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6323192, Length=285, Percent_Identity=22.4561403508772, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI21357875, Length=230, Percent_Identity=26.9565217391304, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24646943, Length=230, Percent_Identity=26.9565217391304, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 50927; Mature: 50927
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLCWALTAMLLAPGTAATAQTQTPPPPGPPPSVSYPTPVERTLANGLRVIAVQRPNVP CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEEECCCCC LVAAQLIVKSGSETDPPARPGIASLAADLLDKGTKTRSALEIAQAIDALGAELEAGAGFD HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC ATRVEVSATTPQFGRAFAILSEVVRTPAFAPAEIARAKTQAISNLQLAYSNPSALAQLVA CEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEEEECCHHHHHHHHH QRLIYGEAPYGQPAEGTPASLGAIARADLERFHRTYFRPDNAVLVLGGDIAPEAAFAEAE HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH RVFGNWAKPAAPLPAFPADKRDTASRVVVIDQPEAGRTAVAVGKAVLRRADPAYILGVVT HHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHH NAVITGYSGRLNAEVRIKRGLSYGAGASLVGRREPGPFVAATLVDHAKAAEATQVVIDTL HHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ASLVGQPAGAEELKPRKAVITGGFARSLETIDGLVNQVGTLALYGLPLGQINTFIGEAEA HHHHCCCCCHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC VTPLKVQEFAAGYLQSNQSVVLVGNAKAFLPDLRKRFAERASRIEVIPFQRLDLGRASLV CCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEECCCHHCCCCCHHCC RPTGVAGK CCCCCCCC >Mature Secondary Structure MKTLCWALTAMLLAPGTAATAQTQTPPPPGPPPSVSYPTPVERTLANGLRVIAVQRPNVP CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEEECCCCC LVAAQLIVKSGSETDPPARPGIASLAADLLDKGTKTRSALEIAQAIDALGAELEAGAGFD HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC ATRVEVSATTPQFGRAFAILSEVVRTPAFAPAEIARAKTQAISNLQLAYSNPSALAQLVA CEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEEEECCHHHHHHHHH QRLIYGEAPYGQPAEGTPASLGAIARADLERFHRTYFRPDNAVLVLGGDIAPEAAFAEAE HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH RVFGNWAKPAAPLPAFPADKRDTASRVVVIDQPEAGRTAVAVGKAVLRRADPAYILGVVT HHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHH NAVITGYSGRLNAEVRIKRGLSYGAGASLVGRREPGPFVAATLVDHAKAAEATQVVIDTL HHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ASLVGQPAGAEELKPRKAVITGGFARSLETIDGLVNQVGTLALYGLPLGQINTFIGEAEA HHHHCCCCCHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC VTPLKVQEFAAGYLQSNQSVVLVGNAKAFLPDLRKRFAERASRIEVIPFQRLDLGRASLV CCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEECCCHHCCCCCHHCC RPTGVAGK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]