| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is pcrA [H]
Identifier: 37523211
GI number: 37523211
Start: 3839103
End: 3841244
Strand: Reverse
Name: pcrA [H]
Synonym: gll3642
Alternate gene names: 37523211
Gene position: 3841244-3839103 (Counterclockwise)
Preceding gene: 37523213
Following gene: 37523210
Centisome position: 82.45
GC content: 66.29
Gene sequence:
>2142_bases ATGCCGGCGTACGAAGCAACCTTACGCCCGGCCCAGCGGGAGGTGCTGCACTACAGTGGGGGGCGGCTGGGCATCTCGGC AGTGCCGGGCAGCGGCAAGACTTTCACCCTCGAAGCGCTGATCGCCGAACTGGTGATTCGGCGGGGGGTGCCTCCCGAGC GCATCGGCGTGTTTACCTTCATGCGCTCCTCTCGGGCCAATTTGACCGGCCGCATCAACCGGCAACTGTGGGAAGGGGGG GTGGCCGGTCGGTTGGAGGCTTTTACCCTGCACTCGCTGGCGCTCAAGGTGCTGCAGCACTTTCAGGGGCAACTGGGCCT GGCGGCGATCGATGTGCTCGAAGGCTATGAGCAGGAGCGCTTCATCAGCCGTCTTACCCAGGCCTGGCTGCGCAACCATT CCGAAATCTGGGAACCGCTTCTGCCGCCGACTGCCGAGGCGGAGCGCGCCGCGCGCAACCGCGCCGCCTTTGGACGCGGT TTCAAAGCAATGTGCCGCGAGGTGATCCGCACCGCCAAAAACTACCGTCTCCCCCCGCAGGCGATCGAACCTGTGCAGGC GGGTTTTCTACCCTGGGCCTTGGGCATCTACCGCAGCTACCAGGCGGAACTGCTGCGCGCGGGCAAGCTCGACTACGACG ATTTGGCCTGGCGGGCGGTGGATCTGATCGAGCGCGACGCCGGGGTGCGCGGCGAGGTCGAAGGGTGGTACGACTACCTG TTCGAGGACGAGTCGCAGGACAGCTCGCCCCTGCAGGAGCGTCTATTGGATTTGTTGAGTGCCCGCAGCGGCAATTTGGT GCGGGTGGGCGATCCCAACCAGAGCATCATGAGCACTTTTACCACCGCCGAGCCGCGCTTTTTTCGGCGCTTCTGCCGCC TCAGCCGGCGGGTCGTCCTCGAAGAATCCAGCCGCTCCGCTCCGATGATCATTGCGCTTGCCAACGCCCTGGTCGACTGG GCAGCTTCCGACCATCCCAACCCCAGCCTGCGCGGCGCCCTGGTTCGCCAGCATATCCGCACCGCGAGCAGCGGTCCTGC CAATCCCGGCGACAGCGAAGCCGCCCTCCACTTTGAAGTGGTGTGCGGTCCGCCCGAAGAGGAGCTTGCCTCTGTGGCCC GCTGCGCGGCCGAAGCGCTGGCGGCGCGCCCGGAGCACAGTTTTGCGGTGCTGGTGGGTACCAACGAACTGGGTGCGCAG GTTCTGCGCCAACTGCAGCGCTTTGCCGGTGTGCGTACCCTCGATCTGTTGCGCAGCAACCCGACCCAGCGCGAACTTAT CGATCGCCTGCGGGTGATGGCCGAGTTTTTTGCCCAACCCTCCTCGCCGGTGCGACTGGCGGCGGCGATAGAATCGCTGG CGGACTGGGCGGGGCTGGGGCGCCGACAAGTCGCCGGCGCCCAACCGCGGCTGCTGCGCATTGCCCCGGAGAAGCTGTTG TTTCCGGTTTTCGGTTCGGAGATAGCCCTGCCGGTGGCTGCCGAGGAGCGGGCCGGTTGGCAAAAGATTTGCTCCACCCT TGCCGGGTGGCTGCTGGCCACCCGCAGCCCCCGGGCGGATAGTCTGCGGTTGGTGGTGCAGACCCTCTACCGCAGCAGTG CGGAAATCTACCTGGGGCACTACGTGGTCGATCAGCTCGAACGCACCCTCGGGGAGCGGCCGGCCGTCGACTGGCAGGAA GTTGCCGACGAGATCCGGGCCATCCTCGACGGTTCGCTCAACAACTTGCCCTCCGAGGCGTTTCACTTCGCCCCCGAACC CGGAGCGATCACCGTCGCCACCGCCCATCGGGCCAAGGGGCTCGAATGGGACGAGGTGTTTCTGACCGGGATTTCAGCTT ACGAATACCCGGTACTGCGCGAGGATCGGCCGGTGGGACTCTATTTTCTGGATGGCCTCGACATGCGCGCCGAGGCCCTC TCCGAACTGCGCGCCAGTGCCCGTCTGCGCCGCGGGCACACCTCGGCGACCGAGCAGGCCTTTTTGGATCTGGCGGCAGA GAAGCTGCGGCTGCTGTACGTCGGGATCACCCGCGCCCGCCGGCGGTTGGTGTTGAGTGTCGCCACGCGCGACCTGTTCG GCCGCGAGCAGAGGCCCTCGCGCCTTTTCCAGGTGCTCCAGTGCTTCGACAGCCGCCGATGA
Upstream 100 bases:
>100_bases TTCCCGAATAAGTATCTGCTGAGCAGGTGTACCTGCAACGGGGGCTGCAGACGCAGGCACAGTTACCGTATGCTAGGGAC ATCTGTCCAGGGGAGGGCCA
Downstream 100 bases:
>100_bases ACGCACCGGTCCTGTTGTCGGCCCCGGCCCTCGACGCGGCCGAGCGCTGTGCAAGGCTGTTTCGTTATCTGTACCTCGAC CGCCTCGGCGGTTCCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 713; Mature: 712
Protein sequence:
>713_residues MPAYEATLRPAQREVLHYSGGRLGISAVPGSGKTFTLEALIAELVIRRGVPPERIGVFTFMRSSRANLTGRINRQLWEGG VAGRLEAFTLHSLALKVLQHFQGQLGLAAIDVLEGYEQERFISRLTQAWLRNHSEIWEPLLPPTAEAERAARNRAAFGRG FKAMCREVIRTAKNYRLPPQAIEPVQAGFLPWALGIYRSYQAELLRAGKLDYDDLAWRAVDLIERDAGVRGEVEGWYDYL FEDESQDSSPLQERLLDLLSARSGNLVRVGDPNQSIMSTFTTAEPRFFRRFCRLSRRVVLEESSRSAPMIIALANALVDW AASDHPNPSLRGALVRQHIRTASSGPANPGDSEAALHFEVVCGPPEEELASVARCAAEALAARPEHSFAVLVGTNELGAQ VLRQLQRFAGVRTLDLLRSNPTQRELIDRLRVMAEFFAQPSSPVRLAAAIESLADWAGLGRRQVAGAQPRLLRIAPEKLL FPVFGSEIALPVAAEERAGWQKICSTLAGWLLATRSPRADSLRLVVQTLYRSSAEIYLGHYVVDQLERTLGERPAVDWQE VADEIRAILDGSLNNLPSEAFHFAPEPGAITVATAHRAKGLEWDEVFLTGISAYEYPVLREDRPVGLYFLDGLDMRAEAL SELRASARLRRGHTSATEQAFLDLAAEKLRLLYVGITRARRRLVLSVATRDLFGREQRPSRLFQVLQCFDSRR
Sequences:
>Translated_713_residues MPAYEATLRPAQREVLHYSGGRLGISAVPGSGKTFTLEALIAELVIRRGVPPERIGVFTFMRSSRANLTGRINRQLWEGG VAGRLEAFTLHSLALKVLQHFQGQLGLAAIDVLEGYEQERFISRLTQAWLRNHSEIWEPLLPPTAEAERAARNRAAFGRG FKAMCREVIRTAKNYRLPPQAIEPVQAGFLPWALGIYRSYQAELLRAGKLDYDDLAWRAVDLIERDAGVRGEVEGWYDYL FEDESQDSSPLQERLLDLLSARSGNLVRVGDPNQSIMSTFTTAEPRFFRRFCRLSRRVVLEESSRSAPMIIALANALVDW AASDHPNPSLRGALVRQHIRTASSGPANPGDSEAALHFEVVCGPPEEELASVARCAAEALAARPEHSFAVLVGTNELGAQ VLRQLQRFAGVRTLDLLRSNPTQRELIDRLRVMAEFFAQPSSPVRLAAAIESLADWAGLGRRQVAGAQPRLLRIAPEKLL FPVFGSEIALPVAAEERAGWQKICSTLAGWLLATRSPRADSLRLVVQTLYRSSAEIYLGHYVVDQLERTLGERPAVDWQE VADEIRAILDGSLNNLPSEAFHFAPEPGAITVATAHRAKGLEWDEVFLTGISAYEYPVLREDRPVGLYFLDGLDMRAEAL SELRASARLRRGHTSATEQAFLDLAAEKLRLLYVGITRARRRLVLSVATRDLFGREQRPSRLFQVLQCFDSRR >Mature_712_residues PAYEATLRPAQREVLHYSGGRLGISAVPGSGKTFTLEALIAELVIRRGVPPERIGVFTFMRSSRANLTGRINRQLWEGGV AGRLEAFTLHSLALKVLQHFQGQLGLAAIDVLEGYEQERFISRLTQAWLRNHSEIWEPLLPPTAEAERAARNRAAFGRGF KAMCREVIRTAKNYRLPPQAIEPVQAGFLPWALGIYRSYQAELLRAGKLDYDDLAWRAVDLIERDAGVRGEVEGWYDYLF EDESQDSSPLQERLLDLLSARSGNLVRVGDPNQSIMSTFTTAEPRFFRRFCRLSRRVVLEESSRSAPMIIALANALVDWA ASDHPNPSLRGALVRQHIRTASSGPANPGDSEAALHFEVVCGPPEEELASVARCAAEALAARPEHSFAVLVGTNELGAQV LRQLQRFAGVRTLDLLRSNPTQRELIDRLRVMAEFFAQPSSPVRLAAAIESLADWAGLGRRQVAGAQPRLLRIAPEKLLF PVFGSEIALPVAAEERAGWQKICSTLAGWLLATRSPRADSLRLVVQTLYRSSAEIYLGHYVVDQLERTLGERPAVDWQEV ADEIRAILDGSLNNLPSEAFHFAPEPGAITVATAHRAKGLEWDEVFLTGISAYEYPVLREDRPVGLYFLDGLDMRAEALS ELRASARLRRGHTSATEQAFLDLAAEKLRLLYVGITRARRRLVLSVATRDLFGREQRPSRLFQVLQCFDSRR
Specific function: Essential helicase [H]
COG id: COG0210
COG function: function code L; Superfamily I DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 uvrD-like helicase C-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: 3000 [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005751 - InterPro: IPR013986 - InterPro: IPR014017 - InterPro: IPR000212 - InterPro: IPR014016 [H]
Pfam domain/function: PF00580 UvrD-helicase [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 79463; Mature: 79331
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAYEATLRPAQREVLHYSGGRLGISAVPGSGKTFTLEALIAELVIRRGVPPERIGVFTF CCCCHHHCCHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHH MRSSRANLTGRINRQLWEGGVAGRLEAFTLHSLALKVLQHFQGQLGLAAIDVLEGYEQER HHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHH FISRLTQAWLRNHSEIWEPLLPPTAEAERAARNRAAFGRGFKAMCREVIRTAKNYRLPPQ HHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHH AIEPVQAGFLPWALGIYRSYQAELLRAGKLDYDDLAWRAVDLIERDAGVRGEVEGWYDYL HHCHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH FEDESQDSSPLQERLLDLLSARSGNLVRVGDPNQSIMSTFTTAEPRFFRRFCRLSRRVVL HCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH EESSRSAPMIIALANALVDWAASDHPNPSLRGALVRQHIRTASSGPANPGDSEAALHFEV CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE VCGPPEEELASVARCAAEALAARPEHSFAVLVGTNELGAQVLRQLQRFAGVRTLDLLRSN EECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHCC PTQRELIDRLRVMAEFFAQPSSPVRLAAAIESLADWAGLGRRQVAGAQPRLLRIAPEKLL CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECHHHHH FPVFGSEIALPVAAEERAGWQKICSTLAGWLLATRSPRADSLRLVVQTLYRSSAEIYLGH HHHCCCCEEECCCCHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEHHH YVVDQLERTLGERPAVDWQEVADEIRAILDGSLNNLPSEAFHFAPEPGAITVATAHRAKG HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEHHHHCC LEWDEVFLTGISAYEYPVLREDRPVGLYFLDGLDMRAEALSELRASARLRRGHTSATEQA CCHHHHHHHCCHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHH FLDLAAEKLRLLYVGITRARRRLVLSVATRDLFGREQRPSRLFQVLQCFDSRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure PAYEATLRPAQREVLHYSGGRLGISAVPGSGKTFTLEALIAELVIRRGVPPERIGVFTF CCCHHHCCHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHH MRSSRANLTGRINRQLWEGGVAGRLEAFTLHSLALKVLQHFQGQLGLAAIDVLEGYEQER HHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHH FISRLTQAWLRNHSEIWEPLLPPTAEAERAARNRAAFGRGFKAMCREVIRTAKNYRLPPQ HHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHH AIEPVQAGFLPWALGIYRSYQAELLRAGKLDYDDLAWRAVDLIERDAGVRGEVEGWYDYL HHCHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH FEDESQDSSPLQERLLDLLSARSGNLVRVGDPNQSIMSTFTTAEPRFFRRFCRLSRRVVL HCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH EESSRSAPMIIALANALVDWAASDHPNPSLRGALVRQHIRTASSGPANPGDSEAALHFEV CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE VCGPPEEELASVARCAAEALAARPEHSFAVLVGTNELGAQVLRQLQRFAGVRTLDLLRSN EECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHCC PTQRELIDRLRVMAEFFAQPSSPVRLAAAIESLADWAGLGRRQVAGAQPRLLRIAPEKLL CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECHHHHH FPVFGSEIALPVAAEERAGWQKICSTLAGWLLATRSPRADSLRLVVQTLYRSSAEIYLGH HHHCCCCEEECCCCHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEHHH YVVDQLERTLGERPAVDWQEVADEIRAILDGSLNNLPSEAFHFAPEPGAITVATAHRAKG HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEHHHHCC LEWDEVFLTGISAYEYPVLREDRPVGLYFLDGLDMRAEALSELRASARLRRGHTSATEQA CCHHHHHHHCCHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHH FLDLAAEKLRLLYVGITRARRRLVLSVATRDLFGREQRPSRLFQVLQCFDSRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA