| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is treZ [H]
Identifier: 37523157
GI number: 37523157
Start: 3778682
End: 3780643
Strand: Direct
Name: treZ [H]
Synonym: glr3588
Alternate gene names: 37523157
Gene position: 3778682-3780643 (Clockwise)
Preceding gene: 37523156
Following gene: 37523158
Centisome position: 81.1
GC content: 59.48
Gene sequence:
>1962_bases GTGCATAACATTCTTGATCTCGATCTAGAAAAAGCAGGTAACTCGAAGCCTATCGGAATTTCATTGATCAGCCCCTCGAT AAGTGGAGAAGATATGGACATATTAGAAGTTGGAGCCCATCCTTTCGTAGGCGATGCCGGAGCATTGAAGGTGCGATTCG GCGTCTATTTGCCCAGCATTACCTTTGCGAAAGGATACGAAGTACTCGTCAGAATCATTCATAAAAGTGACCAATTCACC CCTGAGATTCCGCCGCAGGATTATTTTCTGACGTGCCGGGACGACCACCCCTACGATCTGTGGGAAGCTACCGTCGAGCT GACTTCTCAGCCGCATCCGGCGAACCACTTCGGTAAACCGGGAGTCTATCTCTACCGCTACCAGTTGCGGCGCCACGGAG AAATTGTGACGCTCTGGTTTACAGACCCGTTTGCCCGGGAGACGGGAGTGGGCGAGCTGGCGGCTTTTCACACTCCCGAT ACCGACCCACCCTTCGTCTGGAGCGACGCCGATTTCAGGGTGCCGCCTCTGGATGATCTGGTGGTTTACGAGCTGCAGGT GGACGAATTCAACAACGACTTTGCAGGGCTGATCGAGCAACTCGATTATCTCGAAGGATTGGGAGTCAACTGCCTCGAAC TGATGCCCATCACCAGCGTCCGCCAGGAGTTCGACTGGGGCTATGGTCCTCTGCATTTTTGGGCGCCGGAGGAGCGCTAC GGCGGCAAGCGGGGTTTCAAGCAACTGGTGAACGCCTGCCACGAGCGAGGCATCGCAGTGATTCTCGACTCGGTTTATGA ACACGTCGAAGACAACTTTCCCTACGCGCGGGTCTACCGGGACAGCGGCGAACCCAACCCGATAATCGGTCCATTTGGGG AAGGCTTTTTTGGAACACAGATCGATTTTGCCCAGCCTTTCGCCCGCGAATACTTTCTGGAGTGCAACCGCTACTGGCTG CGGGAGCACCACGTCGACGGCTTTCGCTACGACTATGTGCCGGGGATGTACGACGGCCCGCTGGGCCAGGGTTACGCGAA ACTGGTCTACGACACCTACGAGGACTCGCTCGCCGAGGCCCAACTGGCGGCCCGCTTCCAAGATCCCGCCGGGTTCAGCC GGATCATCCAGTGCGCCGAGCACCTGCCGGATCCGCGCGGCATCCTGCGGCAGACCTTCTCCAACTGCGCCTGGCAGAAC GAGCTGCTGAACAAGGTCGAGAACATGGCCGGGCAGCGCTACGTGGACGACCGCTTCGCTCACTTGCTCGATACGCGCCT GATCGGGTACCCGGACACCCGCGACGCCGAGGGGCTCGCCATGCCCGTCGCCCCCTTCCAGTACTTCGAGACCCACGACC ACAGCCGGCTTATCACCCGCTATGGTCTACTGCCGCCCCTCGGCGGTACAGGCGACATCCAGTACGGGGATCGCCGCAAC TTCTTCAAGCTCCAGCCGTTTGCGATCGCCTTGTACACCTGCCAGGGGATCCCAATGTTGTGGCAGGGTCAGGAGTTTGC CGAAAATTACACGCTGCCGGGGGGCGGCAACCTGCGCATTTCCTTCCGGCGAGACATCCACTGGGAGTTCTTCTACGACG AACAGGGCCGCGCCCTGGTGCGCCTCTACCGCATCCTGGCAAAGCTCCGACGCCAGTGCCCGGCGCTACGCAGCCGCGAA TCGTTCTATTTCAACGAACAGTCGCGCCCCGGCGACGGGGTAATCGCCTATCTGCGCCGGACACCGGAGGATGCCGACGC ACAGGTGGCCGTCGTCTGCCTCAACTTCAGCGACAGCCCTCACCAGATCTGGTTACCCTTCCCTAGCACCGGCACCTACC GCGAGCAGATCGATGCGGCAAGCGCCAACCCGACCTACGACATCGACGTTGCCGTTGCCGGGGAATTTCACAAAGTGGAA ATTCCTGCCAACTACGGCCGCATTTACCTCCACGGCGGGTGA
Upstream 100 bases:
>100_bases TTGACTTTCACCGACGGGCAAGAGCGCCCTGGTGAGCGGCAGCAGCGGCATCTGATATTTACTCGGCCGGAGAAGTTGTG ACTTGCTCGACAGGTAAAGC
Downstream 100 bases:
>100_bases GGCGCTACTCTGTTCATGCGGGTTGGGGGCGGCCCGGGTTTAGACATGCGGAACTCGTTGTCAATGCAAAAGCGAAAACA AGGGTGTGAGCAATCTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: MTHase; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; Maltooligosyl trehalose trehalohydrolase [H]
Number of amino acids: Translated: 653; Mature: 653
Protein sequence:
>653_residues MHNILDLDLEKAGNSKPIGISLISPSISGEDMDILEVGAHPFVGDAGALKVRFGVYLPSITFAKGYEVLVRIIHKSDQFT PEIPPQDYFLTCRDDHPYDLWEATVELTSQPHPANHFGKPGVYLYRYQLRRHGEIVTLWFTDPFARETGVGELAAFHTPD TDPPFVWSDADFRVPPLDDLVVYELQVDEFNNDFAGLIEQLDYLEGLGVNCLELMPITSVRQEFDWGYGPLHFWAPEERY GGKRGFKQLVNACHERGIAVILDSVYEHVEDNFPYARVYRDSGEPNPIIGPFGEGFFGTQIDFAQPFAREYFLECNRYWL REHHVDGFRYDYVPGMYDGPLGQGYAKLVYDTYEDSLAEAQLAARFQDPAGFSRIIQCAEHLPDPRGILRQTFSNCAWQN ELLNKVENMAGQRYVDDRFAHLLDTRLIGYPDTRDAEGLAMPVAPFQYFETHDHSRLITRYGLLPPLGGTGDIQYGDRRN FFKLQPFAIALYTCQGIPMLWQGQEFAENYTLPGGGNLRISFRRDIHWEFFYDEQGRALVRLYRILAKLRRQCPALRSRE SFYFNEQSRPGDGVIAYLRRTPEDADAQVAVVCLNFSDSPHQIWLPFPSTGTYREQIDAASANPTYDIDVAVAGEFHKVE IPANYGRIYLHGG
Sequences:
>Translated_653_residues MHNILDLDLEKAGNSKPIGISLISPSISGEDMDILEVGAHPFVGDAGALKVRFGVYLPSITFAKGYEVLVRIIHKSDQFT PEIPPQDYFLTCRDDHPYDLWEATVELTSQPHPANHFGKPGVYLYRYQLRRHGEIVTLWFTDPFARETGVGELAAFHTPD TDPPFVWSDADFRVPPLDDLVVYELQVDEFNNDFAGLIEQLDYLEGLGVNCLELMPITSVRQEFDWGYGPLHFWAPEERY GGKRGFKQLVNACHERGIAVILDSVYEHVEDNFPYARVYRDSGEPNPIIGPFGEGFFGTQIDFAQPFAREYFLECNRYWL REHHVDGFRYDYVPGMYDGPLGQGYAKLVYDTYEDSLAEAQLAARFQDPAGFSRIIQCAEHLPDPRGILRQTFSNCAWQN ELLNKVENMAGQRYVDDRFAHLLDTRLIGYPDTRDAEGLAMPVAPFQYFETHDHSRLITRYGLLPPLGGTGDIQYGDRRN FFKLQPFAIALYTCQGIPMLWQGQEFAENYTLPGGGNLRISFRRDIHWEFFYDEQGRALVRLYRILAKLRRQCPALRSRE SFYFNEQSRPGDGVIAYLRRTPEDADAQVAVVCLNFSDSPHQIWLPFPSTGTYREQIDAASANPTYDIDVAVAGEFHKVE IPANYGRIYLHGG >Mature_653_residues MHNILDLDLEKAGNSKPIGISLISPSISGEDMDILEVGAHPFVGDAGALKVRFGVYLPSITFAKGYEVLVRIIHKSDQFT PEIPPQDYFLTCRDDHPYDLWEATVELTSQPHPANHFGKPGVYLYRYQLRRHGEIVTLWFTDPFARETGVGELAAFHTPD TDPPFVWSDADFRVPPLDDLVVYELQVDEFNNDFAGLIEQLDYLEGLGVNCLELMPITSVRQEFDWGYGPLHFWAPEERY GGKRGFKQLVNACHERGIAVILDSVYEHVEDNFPYARVYRDSGEPNPIIGPFGEGFFGTQIDFAQPFAREYFLECNRYWL REHHVDGFRYDYVPGMYDGPLGQGYAKLVYDTYEDSLAEAQLAARFQDPAGFSRIIQCAEHLPDPRGILRQTFSNCAWQN ELLNKVENMAGQRYVDDRFAHLLDTRLIGYPDTRDAEGLAMPVAPFQYFETHDHSRLITRYGLLPPLGGTGDIQYGDRRN FFKLQPFAIALYTCQGIPMLWQGQEFAENYTLPGGGNLRISFRRDIHWEFFYDEQGRALVRLYRILAKLRRQCPALRSRE SFYFNEQSRPGDGVIAYLRRTPEDADAQVAVVCLNFSDSPHQIWLPFPSTGTYREQIDAASANPTYDIDVAVAGEFHKVE IPANYGRIYLHGG
Specific function: Hydrolyzes The Alpha-1,6-Glucosidic Linkages In Glycogen Which Has First Been Partially Depolymerized By Phosphorylase. Shows Only Very Little Activity With Native Glycogen. [C]
COG id: COG0296
COG function: function code G; 1,4-alpha-glucan branching enzyme
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI189458812, Length=148, Percent_Identity=31.7567567567568, Blast_Score=67, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR004193 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 - InterPro: IPR014756 - InterPro: IPR015156 - InterPro: IPR012768 [H]
Pfam domain/function: PF09071 Alpha-amyl_C; PF00128 Alpha-amylase; PF02922 CBM_48 [H]
EC number: =3.2.1.141 [H]
Molecular weight: Translated: 74594; Mature: 74594
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNILDLDLEKAGNSKPIGISLISPSISGEDMDILEVGAHPFVGDAGALKVRFGVYLPSI CCCCEECCHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCE TFAKGYEVLVRIIHKSDQFTPEIPPQDYFLTCRDDHPYDLWEATVELTSQPHPANHFGKP EHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCC GVYLYRYQLRRHGEIVTLWFTDPFARETGVGELAAFHTPDTDPPFVWSDADFRVPPLDDL CEEEEEEEHHHCCCEEEEEECCCHHHHCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCE VVYELQVDEFNNDFAGLIEQLDYLEGLGVNCLELMPITSVRQEFDWGYGPLHFWAPEERY EEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHCCCCCCEEECCCHHHC GGKRGFKQLVNACHERGIAVILDSVYEHVEDNFPYARVYRDSGEPNPIIGPFGEGFFGTQ CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEECCCCCCCCCCC IDFAQPFAREYFLECNRYWLREHHVDGFRYDYVPGMYDGPLGQGYAKLVYDTYEDSLAEA CCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH QLAARFQDPAGFSRIIQCAEHLPDPRGILRQTFSNCAWQNELLNKVENMAGQRYVDDRFA HHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH HLLDTRLIGYPDTRDAEGLAMPVAPFQYFETHDHSRLITRYGLLPPLGGTGDIQYGDRRN HHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC FFKLQPFAIALYTCQGIPMLWQGQEFAENYTLPGGGNLRISFRRDIHWEFFYDEQGRALV EEEECCEEEEEEEECCCCEEECCHHHHHCCCCCCCCEEEEEEEECEEEEEEECCCCHHHH RLYRILAKLRRQCPALRSRESFYFNEQSRPGDGVIAYLRRTPEDADAQVAVVCLNFSDSP HHHHHHHHHHHHCCHHHCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCC HQIWLPFPSTGTYREQIDAASANPTYDIDVAVAGEFHKVEIPANYGRIYLHGG CEEEEECCCCCCHHHHHCCCCCCCCEEEEEEEECCEEEEEECCCCCEEEEECC >Mature Secondary Structure MHNILDLDLEKAGNSKPIGISLISPSISGEDMDILEVGAHPFVGDAGALKVRFGVYLPSI CCCCEECCHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCE TFAKGYEVLVRIIHKSDQFTPEIPPQDYFLTCRDDHPYDLWEATVELTSQPHPANHFGKP EHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCC GVYLYRYQLRRHGEIVTLWFTDPFARETGVGELAAFHTPDTDPPFVWSDADFRVPPLDDL CEEEEEEEHHHCCCEEEEEECCCHHHHCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCE VVYELQVDEFNNDFAGLIEQLDYLEGLGVNCLELMPITSVRQEFDWGYGPLHFWAPEERY EEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHCCCCCCEEECCCHHHC GGKRGFKQLVNACHERGIAVILDSVYEHVEDNFPYARVYRDSGEPNPIIGPFGEGFFGTQ CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEECCCCCCCCCCC IDFAQPFAREYFLECNRYWLREHHVDGFRYDYVPGMYDGPLGQGYAKLVYDTYEDSLAEA CCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH QLAARFQDPAGFSRIIQCAEHLPDPRGILRQTFSNCAWQNELLNKVENMAGQRYVDDRFA HHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH HLLDTRLIGYPDTRDAEGLAMPVAPFQYFETHDHSRLITRYGLLPPLGGTGDIQYGDRRN HHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC FFKLQPFAIALYTCQGIPMLWQGQEFAENYTLPGGGNLRISFRRDIHWEFFYDEQGRALV EEEECCEEEEEEEECCCCEEECCHHHHHCCCCCCCCEEEEEEEECEEEEEEECCCCHHHH RLYRILAKLRRQCPALRSRESFYFNEQSRPGDGVIAYLRRTPEDADAQVAVVCLNFSDSP HHHHHHHHHHHHCCHHHCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCC HQIWLPFPSTGTYREQIDAASANPTYDIDVAVAGEFHKVEIPANYGRIYLHGG CEEEEECCCCCCHHHHHCCCCCCCCEEEEEEEECCEEEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8899719; 11427726 [H]