| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is cysR [H]
Identifier: 37523132
GI number: 37523132
Start: 3758241
End: 3759215
Strand: Direct
Name: cysR [H]
Synonym: glr3563
Alternate gene names: 37523132
Gene position: 3758241-3759215 (Clockwise)
Preceding gene: 37523131
Following gene: 37523133
Centisome position: 80.67
GC content: 63.79
Gene sequence:
>975_bases ATGACTGACATTCTCGTGATCGAAGATGATGCCCTCGTCCGGGAGAGCGTCCTGGAAGTGCTCGAAGCCCAGGGCTTTCG GGCCATCGGCGCCCAGAACGGACAGGTGGGCCTTCGCCTCGCCGAGGAGCACCTGCCGGACTTGATCCTCTGCGATATCC TGATGCCCGGCCTCGACGGCTACGCGGTGCTGGCCGCGCTGTCGGACAATCCGCTCACCCAGGGGATTCCCTTTGTTTTT CTGACGGCGAGGGTGGCGAAGCTGAATTGGCGGCAGGCGATGGCCATGGGTGCCGACGATTATCTGCCCAAGCCCTTTAC TGCCGAGGAGTTGCTGGAGACTGTCGCCATCCGGCTCAAAAAGCACGCGCTGCTTCGCTCCCTCCCAGATACTTTCAACA CAAAAAAACCGGCGGCCCCACCGCAGCATTCCATCTCCCATTTTGCTCCCAACCAGGGCATTCCCCTGCACCCGGACAGT TTCTGGCAGGTACACCACGGCCTGGTGAAGCTCAGCGCCGCCCTCGTCGAGGGTGAGCCGGTGGTGGTGGGCTGGGCCGT TGCGCCGATGCTCTTCGGGACCGATGCGGTCGAATCGGAGGTGTATTACCAGGCCTCAGCCGTGGGCCGGGTCGAACTTG CAAAATTCTCGGCCCAGGAGGTGGCCGCATCGCCCCATATGGCCCAAGCCCTGCTCTCCCGCCTGTATCAGAGCAATGCC TTGCTGGCTGTCTGTGGCCAACGGCGGGCCGATGACCGGCTGCGGGGGTTGTTGCTGCTGCTCAAACGGGAGGTGGGGGA GCCCTGCAGGGGGGGCACGCGGCTGCGGGTCCGCTTCACCCACCAGGACCTGGCCAATACGATCGGAACGGCCCGCGCCA CGGTCACCTTATTGCTGAACCGGTTCAAACAATGCGGCTGGATTGCCGTCGAGAGCGATCGCCGCCTGTGCATCTCGGAT GCGCTCCCGCACTGA
Upstream 100 bases:
>100_bases AGGAGGCTGGTCGAGCTGTTAAAGGGGCGGCTCGCCTTCGAAAGCCGTCCCCAGCAAGGAACCACGTTCACCGTTGCCCT GCCCCTCGAGGAGCCGGCCG
Downstream 100 bases:
>100_bases GCGGTGCGCCATGTTGCCCAGCAACCTCCTGAATTCTGCCGTCGCGTTAGTTGACGACAACCTGCCAATAACAACTTTTG TATCATCTGGACAGGCTTCT
Product: two-component response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTDILVIEDDALVRESVLEVLEAQGFRAIGAQNGQVGLRLAEEHLPDLILCDILMPGLDGYAVLAALSDNPLTQGIPFVF LTARVAKLNWRQAMAMGADDYLPKPFTAEELLETVAIRLKKHALLRSLPDTFNTKKPAAPPQHSISHFAPNQGIPLHPDS FWQVHHGLVKLSAALVEGEPVVVGWAVAPMLFGTDAVESEVYYQASAVGRVELAKFSAQEVAASPHMAQALLSRLYQSNA LLAVCGQRRADDRLRGLLLLLKREVGEPCRGGTRLRVRFTHQDLANTIGTARATVTLLLNRFKQCGWIAVESDRRLCISD ALPH
Sequences:
>Translated_324_residues MTDILVIEDDALVRESVLEVLEAQGFRAIGAQNGQVGLRLAEEHLPDLILCDILMPGLDGYAVLAALSDNPLTQGIPFVF LTARVAKLNWRQAMAMGADDYLPKPFTAEELLETVAIRLKKHALLRSLPDTFNTKKPAAPPQHSISHFAPNQGIPLHPDS FWQVHHGLVKLSAALVEGEPVVVGWAVAPMLFGTDAVESEVYYQASAVGRVELAKFSAQEVAASPHMAQALLSRLYQSNA LLAVCGQRRADDRLRGLLLLLKREVGEPCRGGTRLRVRFTHQDLANTIGTARATVTLLLNRFKQCGWIAVESDRRLCISD ALPH >Mature_323_residues TDILVIEDDALVRESVLEVLEAQGFRAIGAQNGQVGLRLAEEHLPDLILCDILMPGLDGYAVLAALSDNPLTQGIPFVFL TARVAKLNWRQAMAMGADDYLPKPFTAEELLETVAIRLKKHALLRSLPDTFNTKKPAAPPQHSISHFAPNQGIPLHPDSF WQVHHGLVKLSAALVEGEPVVVGWAVAPMLFGTDAVESEVYYQASAVGRVELAKFSAQEVAASPHMAQALLSRLYQSNAL LAVCGQRRADDRLRGLLLLLKREVGEPCRGGTRLRVRFTHQDLANTIGTARATVTLLLNRFKQCGWIAVESDRRLCISDA LPH
Specific function: Probably regulates the expression of genes from the sulfate permease complex [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH crp-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=37.2881355932203, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87082012, Length=153, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786911, Length=123, Percent_Identity=34.1463414634146, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1789809, Length=143, Percent_Identity=30.0699300699301, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787375, Length=124, Percent_Identity=28.2258064516129, Blast_Score=65, Evalue=8e-12, Organism=Escherichia coli, GI1786784, Length=120, Percent_Identity=34.1666666666667, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI2367329, Length=121, Percent_Identity=35.5371900826446, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1790863, Length=108, Percent_Identity=29.6296296296296, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1788394, Length=125, Percent_Identity=28, Blast_Score=61, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018490 - InterPro: IPR001808 - InterPro: IPR012318 - InterPro: IPR014710 - InterPro: IPR018335 - InterPro: IPR011991 [H]
Pfam domain/function: PF00325 Crp [H]
EC number: NA
Molecular weight: Translated: 35470; Mature: 35339
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDILVIEDDALVRESVLEVLEAQGFRAIGAQNGQVGLRLAEEHLPDLILCDILMPGLDG CCCEEEECCCHHHHHHHHHHHHHCCCEEECCCCCCEEEEEHHHHCCHHEEHHHHHCCCCC YAVLAALSDNPLTQGIPFVFLTARVAKLNWRQAMAMGADDYLPKPFTAEELLETVAIRLK CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH KHALLRSLPDTFNTKKPAAPPQHSISHFAPNQGIPLHPDSFWQVHHGLVKLSAALVEGEP HHHHHHHCCHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC VVVGWAVAPMLFGTDAVESEVYYQASAVGRVELAKFSAQEVAASPHMAQALLSRLYQSNA EEEHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC LLAVCGQRRADDRLRGLLLLLKREVGEPCRGGTRLRVRFTHQDLANTIGTARATVTLLLN EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH RFKQCGWIAVESDRRLCISDALPH HHHHCCEEEECCCCCEECCCCCCC >Mature Secondary Structure TDILVIEDDALVRESVLEVLEAQGFRAIGAQNGQVGLRLAEEHLPDLILCDILMPGLDG CCEEEECCCHHHHHHHHHHHHHCCCEEECCCCCCEEEEEHHHHCCHHEEHHHHHCCCCC YAVLAALSDNPLTQGIPFVFLTARVAKLNWRQAMAMGADDYLPKPFTAEELLETVAIRLK CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH KHALLRSLPDTFNTKKPAAPPQHSISHFAPNQGIPLHPDSFWQVHHGLVKLSAALVEGEP HHHHHHHCCHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC VVVGWAVAPMLFGTDAVESEVYYQASAVGRVELAKFSAQEVAASPHMAQALLSRLYQSNA EEEHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC LLAVCGQRRADDRLRGLLLLLKREVGEPCRGGTRLRVRFTHQDLANTIGTARATVTLLLN EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH RFKQCGWIAVESDRRLCISDALPH HHHHCCEEEECCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]