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The map label for this gene is 37523103

Identifier: 37523103

GI number: 37523103

Start: 3732383

End: 3733081

Strand: Direct

Name: 37523103

Synonym: glr3534

Alternate gene names: NA

Gene position: 3732383-3733081 (Clockwise)

Preceding gene: 37523101

Following gene: 37523104

Centisome position: 80.11

GC content: 66.09

Gene sequence:

>699_bases
ATGGTCGACTCGACCGTGGCCACCTCGACCACCATCGTCCTCGGCATGAGCGCCGACGGCAAAATCGCTCCGGCCGACCC
CCTCGCCCCGAGGCGCTCGGACCCGGTCGACCACGCCCATCTCGAATATCAAACGTCTCTAGCGGATTTGATCCTCATCG
GCGCAGGCACCATCCGCATCGAGGGGCAAACCTATACCGTGAGCGACCCACAGTGGATTGCTGCCCGCCAGGCGCGCGGC
CAGCCGCCGCAGCCCATCACCTGTGTGGTCAGCCGCTCGCTCGATCTGCCGCCGGATCTGCCGTTTTTTGCGCAGCCCAT
CGAGCGCTGGATCTTGACGACTGAGCAGGCCGTAGCCCGCAGCCCGCACCCGCGCCTTGCCGAACTGGCGACCCTGGTGG
CGGCGGGTGAGAACGAACTCGATTGGGAGCGCGCCTACGCCTTTTTTGCCGAGCGGGGTATTGGGCGGGTGGCGGCCCTG
GGCGGCGGCGATCTGGTCGCAGCGCTGCTTGCGGCGGGACGCATCGATGATCTGTGGCTCACGGTCTGGCCGGTTATCTT
CGGCGGGCGCGAGGCCACCACACCCGTCGAAGGCGCCGGTTTTGAACCGCTCAAGGCTCCGGCCCTCGAACTGGTTGAAT
TGCGCCAGACGGCCGGTGACTTGTTTTTGCACTACCGGGTGATCAAGCCATGCAGGTAA

Upstream 100 bases:

>100_bases
CAACCGCGCAATCCATTCACTGTGCACCCAAATGCGGTAAAGTCCCTAACTGCGGACGTGGTGTGTGCCTGCTACAGTAG
GGGTCGCCGCTCACTTTATA

Downstream 100 bases:

>100_bases
AAATCATCCGCAGCCACCGGCGCACCCGCAGCGTCAGCGCCCGGGCCGAGGGGGACGTGTTTGTCGTGCGCGCCCCCGTC
CAGATGGACGACGCCGAGTT

Product: riboflavin-specific deaminase

Products: NA

Alternate protein names: HTP reductase [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MVDSTVATSTTIVLGMSADGKIAPADPLAPRRSDPVDHAHLEYQTSLADLILIGAGTIRIEGQTYTVSDPQWIAARQARG
QPPQPITCVVSRSLDLPPDLPFFAQPIERWILTTEQAVARSPHPRLAELATLVAAGENELDWERAYAFFAERGIGRVAAL
GGGDLVAALLAAGRIDDLWLTVWPVIFGGREATTPVEGAGFEPLKAPALELVELRQTAGDLFLHYRVIKPCR

Sequences:

>Translated_232_residues
MVDSTVATSTTIVLGMSADGKIAPADPLAPRRSDPVDHAHLEYQTSLADLILIGAGTIRIEGQTYTVSDPQWIAARQARG
QPPQPITCVVSRSLDLPPDLPFFAQPIERWILTTEQAVARSPHPRLAELATLVAAGENELDWERAYAFFAERGIGRVAAL
GGGDLVAALLAAGRIDDLWLTVWPVIFGGREATTPVEGAGFEPLKAPALELVELRQTAGDLFLHYRVIKPCR
>Mature_232_residues
MVDSTVATSTTIVLGMSADGKIAPADPLAPRRSDPVDHAHLEYQTSLADLILIGAGTIRIEGQTYTVSDPQWIAARQARG
QPPQPITCVVSRSLDLPPDLPFFAQPIERWILTTEQAVARSPHPRLAELATLVAAGENELDWERAYAFFAERGIGRVAAL
GGGDLVAALLAAGRIDDLWLTVWPVIFGGREATTPVEGAGFEPLKAPALELVELRQTAGDLFLHYRVIKPCR

Specific function: Unknown

COG id: COG1985

COG function: function code H; Pyrimidine reductase, riboflavin biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HTP reductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006401
- InterPro:   IPR011549
- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: =1.1.1.193 [H]

Molecular weight: Translated: 25036; Mature: 25036

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDSTVATSTTIVLGMSADGKIAPADPLAPRRSDPVDHAHLEYQTSLADLILIGAGTIRI
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCEEEE
EGQTYTVSDPQWIAARQARGQPPQPITCVVSRSLDLPPDLPFFAQPIERWILTTEQAVAR
CCCEEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHC
SPHPRLAELATLVAAGENELDWERAYAFFAERGIGRVAALGGGDLVAALLAAGRIDDLWL
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCHHHH
TVWPVIFGGREATTPVEGAGFEPLKAPALELVELRQTAGDLFLHYRVIKPCR
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCC
>Mature Secondary Structure
MVDSTVATSTTIVLGMSADGKIAPADPLAPRRSDPVDHAHLEYQTSLADLILIGAGTIRI
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCEEEE
EGQTYTVSDPQWIAARQARGQPPQPITCVVSRSLDLPPDLPFFAQPIERWILTTEQAVAR
CCCEEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHC
SPHPRLAELATLVAAGENELDWERAYAFFAERGIGRVAALGGGDLVAALLAAGRIDDLWL
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCHHHH
TVWPVIFGGREATTPVEGAGFEPLKAPALELVELRQTAGDLFLHYRVIKPCR
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]