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The map label for this gene is dnaJ [H]

Identifier: 37523081

GI number: 37523081

Start: 3716388

End: 3716813

Strand: Direct

Name: dnaJ [H]

Synonym: gvip477

Alternate gene names: 37523081

Gene position: 3716388-3716813 (Clockwise)

Preceding gene: 37523077

Following gene: 37523082

Centisome position: 79.77

GC content: 60.33

Gene sequence:

>426_bases
ATGTGGGAGATGAAAAGGCCAGACTACTATCGGGTGTTGGGTGTGCCGCCTGGGGCGAGTGAACGGGACATTCGCCAGGC
GTATCGTTTGCTTTCTAAGCAGTACCATCCGGACATTTCCCCACTGGCGCCGGAGGAGGCCCTCGAAAAGTTCAAATTGC
TCAACGAGGCCTACGCTACCCTTTCCCATCCCACCAAGCGCTCCCACTACGACCTGACCCTGGGACTGACCCGCACCGCC
GTTTTGCAGCAGCAGCAGCAACAACAACAGCAGCGGCCGGTGCCGCCGCGCCGCCGCCCGAGCGGCCGGTTCGACATCAG
CGAGCGCCCTTTGTCCCCCACGGAGATTTTTGCACTCTTTATTTTGGGGATCGCCTTTGCCGCTTCGCTGCTGCTCGTTG
CCTTCATCGACTGGATCAACGGCTGA

Upstream 100 bases:

>100_bases
CTGTGGCTATAAAACACTAGATGCGGTAGGTAGTCAAGCCGTCCGCACCGAGCCGGCGCCTTCGAAGCCGGATGCGGCGC
CGCGGCAAGCTGGCGCTAAA

Downstream 100 bases:

>100_bases
CGGCCACTTTCTGAGCACCTTTGCCATGAACTCTTTGCCCACCGCCGATACGCCCCTGTACAACCACCCGCTGCACAAGA
TCGAGATCTGGCTGCGCGAG

Product: chaperone protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MWEMKRPDYYRVLGVPPGASERDIRQAYRLLSKQYHPDISPLAPEEALEKFKLLNEAYATLSHPTKRSHYDLTLGLTRTA
VLQQQQQQQQQRPVPPRRRPSGRFDISERPLSPTEIFALFILGIAFAASLLLVAFIDWING

Sequences:

>Translated_141_residues
MWEMKRPDYYRVLGVPPGASERDIRQAYRLLSKQYHPDISPLAPEEALEKFKLLNEAYATLSHPTKRSHYDLTLGLTRTA
VLQQQQQQQQQRPVPPRRRPSGRFDISERPLSPTEIFALFILGIAFAASLLLVAFIDWING
>Mature_141_residues
MWEMKRPDYYRVLGVPPGASERDIRQAYRLLSKQYHPDISPLAPEEALEKFKLLNEAYATLSHPTKRSHYDLTLGLTRTA
VLQQQQQQQQQRPVPPRRRPSGRFDISERPLSPTEIFALFILGIAFAASLLLVAFIDWING

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI23503241, Length=64, Percent_Identity=54.6875, Blast_Score=70, Evalue=4e-13,
Organism=Homo sapiens, GI5031741, Length=62, Percent_Identity=53.2258064516129, Blast_Score=70, Evalue=9e-13,
Organism=Homo sapiens, GI205360838, Length=68, Percent_Identity=48.5294117647059, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI205360840, Length=68, Percent_Identity=48.5294117647059, Blast_Score=68, Evalue=2e-12,
Organism=Homo sapiens, GI194328758, Length=68, Percent_Identity=48.5294117647059, Blast_Score=67, Evalue=5e-12,
Organism=Homo sapiens, GI194328760, Length=68, Percent_Identity=48.5294117647059, Blast_Score=67, Evalue=5e-12,
Organism=Homo sapiens, GI201862518, Length=64, Percent_Identity=50, Blast_Score=66, Evalue=8e-12,
Organism=Homo sapiens, GI201862587, Length=64, Percent_Identity=50, Blast_Score=66, Evalue=8e-12,
Organism=Homo sapiens, GI56549115, Length=64, Percent_Identity=50, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI4885495, Length=64, Percent_Identity=53.125, Blast_Score=65, Evalue=1e-11,
Organism=Homo sapiens, GI194306642, Length=137, Percent_Identity=35.036496350365, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI194306640, Length=137, Percent_Identity=35.036496350365, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI7706495, Length=64, Percent_Identity=51.5625, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI17388799, Length=64, Percent_Identity=53.125, Blast_Score=64, Evalue=3e-11,
Organism=Homo sapiens, GI22749377, Length=116, Percent_Identity=33.6206896551724, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786197, Length=68, Percent_Identity=47.0588235294118, Blast_Score=65, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17554900, Length=66, Percent_Identity=50, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6322388, Length=101, Percent_Identity=38.6138613861386, Blast_Score=65, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6324103, Length=63, Percent_Identity=46.031746031746, Blast_Score=64, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6324265, Length=68, Percent_Identity=47.0588235294118, Blast_Score=63, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323870, Length=64, Percent_Identity=48.4375, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 16245; Mature: 16245

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWEMKRPDYYRVLGVPPGASERDIRQAYRLLSKQYHPDISPLAPEEALEKFKLLNEAYAT
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
LSHPTKRSHYDLTLGLTRTAVLQQQQQQQQQRPVPPRRRPSGRFDISERPLSPTEIFALF
HCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
ILGIAFAASLLLVAFIDWING
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWEMKRPDYYRVLGVPPGASERDIRQAYRLLSKQYHPDISPLAPEEALEKFKLLNEAYAT
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
LSHPTKRSHYDLTLGLTRTAVLQQQQQQQQQRPVPPRRRPSGRFDISERPLSPTEIFALF
HCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
ILGIAFAASLLLVAFIDWING
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA