Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

Click here to switch to the map view.

The map label for this gene is 37522942

Identifier: 37522942

GI number: 37522942

Start: 3583399

End: 3583638

Strand: Reverse

Name: 37522942

Synonym: gsl3373

Alternate gene names: NA

Gene position: 3583638-3583399 (Counterclockwise)

Preceding gene: 37522944

Following gene: 37522941

Centisome position: 76.92

GC content: 65.42

Gene sequence:

>240_bases
ATGCCCTCCGCCGCCCTTCTTCTCGCCCTAGCCGCATTGCCGCCCGGGGCTGCCGCCCAGCAACCGCCCCGCATTCCCAC
CGAAGAGCAAATCGATAGAGCCTGCGCCACTGGAGCCGCCGACACCCTGCCCAACCCGTTTCGCGATGTCCGCCCGGAGC
ACTGGGCCTACAAGGCGGTCCTCAACCTGCATTATTGTGGAGCGGCAAGGTCGGTCAGGAAGACCATTTCAGCCTCCTAG

Upstream 100 bases:

>100_bases
AAGTTGGCACAGACCACCGGACAGATGTCGCCAAGCAGCAAACCGGCTGCGGGAGTTTAACCTGGGTAGATATTTCGATA
CTCTCGACGCTGCTATGCCC

Downstream 100 bases:

>100_bases
CCAAGCCTTCCTGTATAATGCTGTGTACACAAAGGTTCCGCTGTGCTTAATCGCCGTCGTCCTCCCCTGATGTATCAGCC
ATCTGCTCACCGACTCCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MPSAALLLALAALPPGAAAQQPPRIPTEEQIDRACATGAADTLPNPFRDVRPEHWAYKAVLNLHYCGAARSVRKTISAS

Sequences:

>Translated_79_residues
MPSAALLLALAALPPGAAAQQPPRIPTEEQIDRACATGAADTLPNPFRDVRPEHWAYKAVLNLHYCGAARSVRKTISAS
>Mature_78_residues
PSAALLLALAALPPGAAAQQPPRIPTEEQIDRACATGAADTLPNPFRDVRPEHWAYKAVLNLHYCGAARSVRKTISAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8377; Mature: 8245

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSAALLLALAALPPGAAAQQPPRIPTEEQIDRACATGAADTLPNPFRDVRPEHWAYKAV
CCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHH
LNLHYCGAARSVRKTISAS
HHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure 
PSAALLLALAALPPGAAAQQPPRIPTEEQIDRACATGAADTLPNPFRDVRPEHWAYKAV
CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHH
LNLHYCGAARSVRKTISAS
HHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA