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The map label for this gene is arnC [H]

Identifier: 37522900

GI number: 37522900

Start: 3536471

End: 3537238

Strand: Reverse

Name: arnC [H]

Synonym: gll3331

Alternate gene names: 37522900

Gene position: 3537238-3536471 (Counterclockwise)

Preceding gene: 37522901

Following gene: 37522895

Centisome position: 75.92

GC content: 67.45

Gene sequence:

>768_bases
ATGCTCGCCGACTTGCTCCCTGTGCCCACAGGCCCCCTGACCATCCCCGTGACCGGCGAGACAGCCGTGCGCCTCTCCCT
GGTGATCCCCACCTACCGCGAAGCCCAAAACATCGAAGCGCTGCTCGTGCAGTTGACCCGGTTGCTGAAGGCTGCCTTGC
CCGGAACCTTTGAGCTGATTGTCGTCGACGACGACAGCCCCGATTTTACCTGGAAGCTGGCCCAGGGCCTGACGGCGGAT
TATCCTCACCTGCGGGTGATGCGCCGCACCGACGAGCGCGGTCTGGCGACGGCCGTGGTCCGCGGCTGGCAGGCGTCGCG
CGGGCAACTGTTGGGGGTGATCGACGGCGATCTGCAGCACCCGCCCGAGAATTTGCTGAAATTGCTGGCCGCCGCCGAGC
AGGGGGCGGATCTGGCGGTGGCCAGCCGCCACACCGAGGGCGGCGGCGTAAGCACCTGGCGTCTCGCGCGGCGGATCGTC
TCGCGCGGCGCCCAGCTTATCGGTCTCGTCCTGCTTCCCGGCGTGGTCGGTCGGCTCAGCGATCCGATGAGCGGCTTTTT
TGTGGTGCGGCGCGCCTGTCTGGCGGGCAAGCCCCTCAGTCCCCTGGGCTACAAGATCTTGCTGGAGGTCCTGGGCCGCG
GCGACATCCGCACCATCCGGGAGGTGGGCTACGTCTTTGAGGAGCGCACCCAGGGCGAGAGCAAAGTGACCCTGCGCCAG
TACGGCGAGTACCTGCTCCACCTGTTGCGCTTGCGCCTTTCGCGTTGA

Upstream 100 bases:

>100_bases
GCGGCTTTCGCGCCCGGCCGGAGGACCAAACCACCCCGCTTGGCGATTTTGACGGTCGGCGCCTCGAGCGCGAACAACAA
AAGCAACCTTAGGACCACGC

Downstream 100 bases:

>100_bases
ACCGAAGCTTTCGATCTTGCCAAGAGCGCGGGCAGGACAAATCGCCGTGAAGGCCGGTGCAGCAGACGTTACGGTACCCT
GGTGTTGGGCGGCAAGGCTC

Product: dolichyl phosphoryl mannose synthase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MLADLLPVPTGPLTIPVTGETAVRLSLVIPTYREAQNIEALLVQLTRLLKAALPGTFELIVVDDDSPDFTWKLAQGLTAD
YPHLRVMRRTDERGLATAVVRGWQASRGQLLGVIDGDLQHPPENLLKLLAAAEQGADLAVASRHTEGGGVSTWRLARRIV
SRGAQLIGLVLLPGVVGRLSDPMSGFFVVRRACLAGKPLSPLGYKILLEVLGRGDIRTIREVGYVFEERTQGESKVTLRQ
YGEYLLHLLRLRLSR

Sequences:

>Translated_255_residues
MLADLLPVPTGPLTIPVTGETAVRLSLVIPTYREAQNIEALLVQLTRLLKAALPGTFELIVVDDDSPDFTWKLAQGLTAD
YPHLRVMRRTDERGLATAVVRGWQASRGQLLGVIDGDLQHPPENLLKLLAAAEQGADLAVASRHTEGGGVSTWRLARRIV
SRGAQLIGLVLLPGVVGRLSDPMSGFFVVRRACLAGKPLSPLGYKILLEVLGRGDIRTIREVGYVFEERTQGESKVTLRQ
YGEYLLHLLRLRLSR
>Mature_255_residues
MLADLLPVPTGPLTIPVTGETAVRLSLVIPTYREAQNIEALLVQLTRLLKAALPGTFELIVVDDDSPDFTWKLAQGLTAD
YPHLRVMRRTDERGLATAVVRGWQASRGQLLGVIDGDLQHPPENLLKLLAAAEQGADLAVASRHTEGGGVSTWRLARRIV
SRGAQLIGLVLLPGVVGRLSDPMSGFFVVRRACLAGKPLSPLGYKILLEVLGRGDIRTIREVGYVFEERTQGESKVTLRQ
YGEYLLHLLRLRLSR

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=236, Percent_Identity=30.9322033898305, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71999402, Length=237, Percent_Identity=31.6455696202532, Blast_Score=102, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6325441, Length=243, Percent_Identity=33.3333333333333, Blast_Score=126, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24585265, Length=246, Percent_Identity=30.0813008130081, Blast_Score=100, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 27954; Mature: 27954

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLADLLPVPTGPLTIPVTGETAVRLSLVIPTYREAQNIEALLVQLTRLLKAALPGTFELI
CCCCCCCCCCCCEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
VVDDDSPDFTWKLAQGLTADYPHLRVMRRTDERGLATAVVRGWQASRGQLLGVIDGDLQH
EEECCCCCEEHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCC
PPENLLKLLAAAEQGADLAVASRHTEGGGVSTWRLARRIVSRGAQLIGLVLLPGVVGRLS
CHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
DPMSGFFVVRRACLAGKPLSPLGYKILLEVLGRGDIRTIREVGYVFEERTQGESKVTLRQ
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
YGEYLLHLLRLRLSR
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MLADLLPVPTGPLTIPVTGETAVRLSLVIPTYREAQNIEALLVQLTRLLKAALPGTFELI
CCCCCCCCCCCCEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
VVDDDSPDFTWKLAQGLTADYPHLRVMRRTDERGLATAVVRGWQASRGQLLGVIDGDLQH
EEECCCCCEEHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCC
PPENLLKLLAAAEQGADLAVASRHTEGGGVSTWRLARRIVSRGAQLIGLVLLPGVVGRLS
CHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
DPMSGFFVVRRACLAGKPLSPLGYKILLEVLGRGDIRTIREVGYVFEERTQGESKVTLRQ
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
YGEYLLHLLRLRLSR
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA