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The map label for this gene is 37522877

Identifier: 37522877

GI number: 37522877

Start: 3506873

End: 3508441

Strand: Reverse

Name: 37522877

Synonym: gll3308

Alternate gene names: NA

Gene position: 3508441-3506873 (Counterclockwise)

Preceding gene: 37522878

Following gene: 37522876

Centisome position: 75.3

GC content: 63.93

Gene sequence:

>1569_bases
ATGAGCGCGGTAGAACAAAAAATCAACGAACTGGAGCAACTTACCCAGACCGCGGAGTTTCAAGCCCTCCCGCCCGAGGA
GCGCCGCCGGATTCTTGATGACTATTACCGGCGGGAACTGGCCCCGGCCTCGGTGGACCGCGCCAGCTTCGACAAAATAT
TCGCCGCCGCCTGGCAGGCCCCGCCGCCTGTCAAAGCGGCCTCTGAACGCAAGCAGCTTAACCTCACCCCGGTGTGGTTG
ACCCTGGGATTGGTGGGTGTGACGGCCGTCGCCCTCACTGGCCTGGTGTTCTGGACCAATAACCTGCAGGATATCAGTAC
CCAGGACGACGCGACGCTCATCAAGAGCCTGCGCGGCGGCGATCCGGTGCGCGAGGACGAAGTGGCCCTGCGCCGCTCGC
TGCCGGACACCGGCCCGGAAGTCTGGGAGATCGAAAAGGCCCTGGAGCAGATCGCCGAACCACTCAAAGACGGCGGCTGG
CTGGAAGCGAAGGAGCGCACCGCCCGGGTGGTGGATTTGCTCAACCGCTACGAACCGCAGATCCTCGCCCGTGTTCCCGC
CAATGCGCGCAATCGGGCCGTGCAGGCGATTGCCCAGGTGCGCGCCAACATCCGCGCCCTCGAAGACAAGATTCAGGCAA
AGGACATCACCGGTTCGACCCTCCAGGCGCGGCGGACTTTCTGGTATCTCGACTTATTGGAACTGGCGCTCCTCGAGGAG
TTCCGGCCCGAGGTGCCCGCCGAGTACCGCAATTTGCCCAGACTGGAGGGGGGCTGGGCGATGGTGCGCTTCACCACCGA
CCGCGGCCCCTTCGTGGCCCTGGTGGACGGCTTCAACGCCCCGGTGACCGCCGGCAACTTTCTAGATCTGGTGCAACGGG
GCTTCTACAACGGCCTGAAGATCACCCGCGCCGAGCGGTTCAACCTGGTGCAGACGGGTGACCCCAGCGGCAAGGGCACC
GGCGGCTTCACCGACCCGGCTACCGGCAAATTGCGCACGATTCCGATGGAGGTGCGCCCGGCGCGCAAAGAAGCCGAGAT
CACCGCTTCGCAGGTCATCCAGCGGCGCGTCGACTACGTCCAGGATCGCTTCGAACTCGACCCCATCAAGCTGCGCGAGG
AGATGAGCAACCTGCATAAGCGCTATATTGCCGACGACTGGAAGCCGGTGCCCTACGGCAAGACCATCGAGAGCTACCCG
GCGCTGTACTACGGCCCGCCGGGAGTGTTCTCAATGGCGCGCTACGAAAAAGATCCGAATTCCGCCTCCAGCCAGTTTTT
CATCTCCTTCTCCGACCCCGAACTCAACCCGACCGGCAAGAACCTCTCCGACGGCAAGTACGCCAACTTCGGCTACATCA
CCCAGGGCATCCGTACCCTCCGCCAGCTCAAAGTCGGCGACACCATCCAAAAAGCCGAGATCTTGAACTGCAAAGCAGCG
GCTTTCAACGAATACCGCGAACTGCCCCCGGCGGGCTCTTCGATGTACGCCACCCGCGAAGGCCCCGCCACCAACCTGGA
GACGAGTTGCCTGCCCCTGCCCGCGCCGCGCCTGGTGAGCGGTCCCTAG

Upstream 100 bases:

>100_bases
CCGAAGGCCCGGCGGCGGCGACCAAACCGGCGATGCGCATCGTGCGCGACAGCGACGGCCGATTGAGTTTGCAGCCCGAC
CAACCGAGCGGGGTAGAGCG

Downstream 100 bases:

>100_bases
GGCCTGGGTATACTGGGTCTGTCCGGCCCCGAGGCGAGGTGTACGGCGATGACCTTTATGCAGCCCGCTTACCCATTGCC
GCCGAAGCAGACGCTCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Putative thylakoid lumen PPIase; Putative thylakoid lumen rotamase [H]

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MSAVEQKINELEQLTQTAEFQALPPEERRRILDDYYRRELAPASVDRASFDKIFAAAWQAPPPVKAASERKQLNLTPVWL
TLGLVGVTAVALTGLVFWTNNLQDISTQDDATLIKSLRGGDPVREDEVALRRSLPDTGPEVWEIEKALEQIAEPLKDGGW
LEAKERTARVVDLLNRYEPQILARVPANARNRAVQAIAQVRANIRALEDKIQAKDITGSTLQARRTFWYLDLLELALLEE
FRPEVPAEYRNLPRLEGGWAMVRFTTDRGPFVALVDGFNAPVTAGNFLDLVQRGFYNGLKITRAERFNLVQTGDPSGKGT
GGFTDPATGKLRTIPMEVRPARKEAEITASQVIQRRVDYVQDRFELDPIKLREEMSNLHKRYIADDWKPVPYGKTIESYP
ALYYGPPGVFSMARYEKDPNSASSQFFISFSDPELNPTGKNLSDGKYANFGYITQGIRTLRQLKVGDTIQKAEILNCKAA
AFNEYRELPPAGSSMYATREGPATNLETSCLPLPAPRLVSGP

Sequences:

>Translated_522_residues
MSAVEQKINELEQLTQTAEFQALPPEERRRILDDYYRRELAPASVDRASFDKIFAAAWQAPPPVKAASERKQLNLTPVWL
TLGLVGVTAVALTGLVFWTNNLQDISTQDDATLIKSLRGGDPVREDEVALRRSLPDTGPEVWEIEKALEQIAEPLKDGGW
LEAKERTARVVDLLNRYEPQILARVPANARNRAVQAIAQVRANIRALEDKIQAKDITGSTLQARRTFWYLDLLELALLEE
FRPEVPAEYRNLPRLEGGWAMVRFTTDRGPFVALVDGFNAPVTAGNFLDLVQRGFYNGLKITRAERFNLVQTGDPSGKGT
GGFTDPATGKLRTIPMEVRPARKEAEITASQVIQRRVDYVQDRFELDPIKLREEMSNLHKRYIADDWKPVPYGKTIESYP
ALYYGPPGVFSMARYEKDPNSASSQFFISFSDPELNPTGKNLSDGKYANFGYITQGIRTLRQLKVGDTIQKAEILNCKAA
AFNEYRELPPAGSSMYATREGPATNLETSCLPLPAPRLVSGP
>Mature_521_residues
SAVEQKINELEQLTQTAEFQALPPEERRRILDDYYRRELAPASVDRASFDKIFAAAWQAPPPVKAASERKQLNLTPVWLT
LGLVGVTAVALTGLVFWTNNLQDISTQDDATLIKSLRGGDPVREDEVALRRSLPDTGPEVWEIEKALEQIAEPLKDGGWL
EAKERTARVVDLLNRYEPQILARVPANARNRAVQAIAQVRANIRALEDKIQAKDITGSTLQARRTFWYLDLLELALLEEF
RPEVPAEYRNLPRLEGGWAMVRFTTDRGPFVALVDGFNAPVTAGNFLDLVQRGFYNGLKITRAERFNLVQTGDPSGKGTG
GFTDPATGKLRTIPMEVRPARKEAEITASQVIQRRVDYVQDRFELDPIKLREEMSNLHKRYIADDWKPVPYGKTIESYPA
LYYGPPGVFSMARYEKDPNSASSQFFISFSDPELNPTGKNLSDGKYANFGYITQGIRTLRQLKVGDTIQKAEILNCKAAA
FNEYRELPPAGSSMYATREGPATNLETSCLPLPAPRLVSGP

Specific function: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Required for the assembly and stabilization of PSII [H]

COG id: COG0652

COG function: function code O; Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family

Gene ontology:

Cell location: Cellular thylakoid lumen (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase cyclophilin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015891
- InterPro:   IPR002130
- InterPro:   IPR023222 [H]

Pfam domain/function: PF00160 Pro_isomerase [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 58430; Mature: 58299

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS50072 CSA_PPIASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVEQKINELEQLTQTAEFQALPPEERRRILDDYYRRELAPASVDRASFDKIFAAAWQA
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
PPPVKAASERKQLNLTPVWLTLGLVGVTAVALTGLVFWTNNLQDISTQDDATLIKSLRGG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
DPVREDEVALRRSLPDTGPEVWEIEKALEQIAEPLKDGGWLEAKERTARVVDLLNRYEPQ
CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
ILARVPANARNRAVQAIAQVRANIRALEDKIQAKDITGSTLQARRTFWYLDLLELALLEE
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
FRPEVPAEYRNLPRLEGGWAMVRFTTDRGPFVALVDGFNAPVTAGNFLDLVQRGFYNGLK
HCCCCCHHHHCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCEE
ITRAERFNLVQTGDPSGKGTGGFTDPATGKLRTIPMEVRPARKEAEITASQVIQRRVDYV
EEEHHHCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
QDRFELDPIKLREEMSNLHKRYIADDWKPVPYGKTIESYPALYYGPPGVFSMARYEKDPN
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEECCCCHHHHHHHCCCCC
SASSQFFISFSDPELNPTGKNLSDGKYANFGYITQGIRTLRQLKVGDTIQKAEILNCKAA
CCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AFNEYRELPPAGSSMYATREGPATNLETSCLPLPAPRLVSGP
HHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAVEQKINELEQLTQTAEFQALPPEERRRILDDYYRRELAPASVDRASFDKIFAAAWQA
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
PPPVKAASERKQLNLTPVWLTLGLVGVTAVALTGLVFWTNNLQDISTQDDATLIKSLRGG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
DPVREDEVALRRSLPDTGPEVWEIEKALEQIAEPLKDGGWLEAKERTARVVDLLNRYEPQ
CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
ILARVPANARNRAVQAIAQVRANIRALEDKIQAKDITGSTLQARRTFWYLDLLELALLEE
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
FRPEVPAEYRNLPRLEGGWAMVRFTTDRGPFVALVDGFNAPVTAGNFLDLVQRGFYNGLK
HCCCCCHHHHCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCEE
ITRAERFNLVQTGDPSGKGTGGFTDPATGKLRTIPMEVRPARKEAEITASQVIQRRVDYV
EEEHHHCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
QDRFELDPIKLREEMSNLHKRYIADDWKPVPYGKTIESYPALYYGPPGVFSMARYEKDPN
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEECCCCHHHHHHHCCCCC
SASSQFFISFSDPELNPTGKNLSDGKYANFGYITQGIRTLRQLKVGDTIQKAEILNCKAA
CCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AFNEYRELPPAGSSMYATREGPATNLETSCLPLPAPRLVSGP
HHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]