Click here to switch to the map view.

The map label for this gene is ycdN [C]

Identifier: 37522857

GI number: 37522857

Start: 3491636

End: 3492595

Strand: Reverse

Name: ycdN [C]

Synonym: gll3288

Alternate gene names: 37522857

Gene position: 3492595-3491636 (Counterclockwise)

Preceding gene: 37522858

Following gene: 37522856

Centisome position: 74.96

GC content: 64.69

Gene sequence:

>960_bases
ATGGATTTTGCCGCCGCTTTGCCCACCTTTGCCATCACCCTGCGCGAGGGCGTCGAGGCCGCCCTGGTGGTCGGGATCGT
GCTTGCCTGCCTCAAAAAAGCCGGGCATACCCACCTGAACCGCTGGGTGTGGGGCGGCGTGGCAGGCGGCCTTGCCGCAA
GCACCGCGGTGGGGCTGCTGTTCGGTTGGCTGCTGGGCAATCTGAGTACCGCCAACCAGAAGTACGCCCCGGCCGTCGAG
CCGCTGCTGGAGGGCATCTTCGGGGTGCTTGCCATCGGGATGCTCAGCTGGATGCTCATCTGGATGACCCGCCAGGCGCG
TACCCTCAAAGGCCAGGTGGAAGCCTCGGTGGGCCAGGCACTGGGCCAGGAGCGCGCCGCCGGTTGGGCCATCGCCTGGC
TGATTCTGTTTACGGTGCTGCGCGAAGGCTTCGAGACGGTGCTGTTTGTCACCTCGTATTTTCGCCAGGGGTTCGTACCG
GCTTTTGGGGCGGTGGCGGGCATCCTGGTCGCCGTCGCCATCGCCGTATTGCTCTTTAGGTGGGGTGTGCGTATCGACTT
GCGCCGCTTCTTTCAGACGATGGGACTGCTGCTGCTGCTGATTGTCTCGGGGCTGGTGGTCACTTCGCTCGGGCACTTCG
ACGCCGCCCTGCGCGCCCTTGCCCAGATCGACCGCGCCTCCGAGTCGCTGTGTTTTTTGAGCGAACGGTTTACCCGCAAC
GCCTCGTGTGTCCTGGGACCGCAGGTCTGGGACGGCACGCGCATCCTGCCTGAAAACCAGCCTCCGGGAATGCTCCTTGG
TGCATTGTTTGGCTACGCCGAGCGGCTCTATCTGGTGCAGGCACTCTTTTACGCCCTGTTTCTGGTCGGGGTGGGCAGTG
TCTACTGGCAGAGCGTCACCGGCAAACCGCTGCTTCCGCTCAAAAGTCGCGGTGGCGCTACGCGCACGCCCACGGCCTGA

Upstream 100 bases:

>100_bases
GAGGCGCCCAATCCCCCGGCTTTGAGCGCCGAGGAAGTGGCCGCCTCGGTGAAGTCCGTCGAACAAGCCGCCCAGAAATT
CGCCACCTAGGGGAGTCGCT

Downstream 100 bases:

>100_bases
TCCTACCCACCGTTAAGATCTTTTGCGGGTGGAGCAATAATCCGCCAACATTGGCGGCGAGGGGCTACACTGCCTCCTAA
GTGTCTGCCGCAAGGCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MDFAAALPTFAITLREGVEAALVVGIVLACLKKAGHTHLNRWVWGGVAGGLAASTAVGLLFGWLLGNLSTANQKYAPAVE
PLLEGIFGVLAIGMLSWMLIWMTRQARTLKGQVEASVGQALGQERAAGWAIAWLILFTVLREGFETVLFVTSYFRQGFVP
AFGAVAGILVAVAIAVLLFRWGVRIDLRRFFQTMGLLLLLIVSGLVVTSLGHFDAALRALAQIDRASESLCFLSERFTRN
ASCVLGPQVWDGTRILPENQPPGMLLGALFGYAERLYLVQALFYALFLVGVGSVYWQSVTGKPLLPLKSRGGATRTPTA

Sequences:

>Translated_319_residues
MDFAAALPTFAITLREGVEAALVVGIVLACLKKAGHTHLNRWVWGGVAGGLAASTAVGLLFGWLLGNLSTANQKYAPAVE
PLLEGIFGVLAIGMLSWMLIWMTRQARTLKGQVEASVGQALGQERAAGWAIAWLILFTVLREGFETVLFVTSYFRQGFVP
AFGAVAGILVAVAIAVLLFRWGVRIDLRRFFQTMGLLLLLIVSGLVVTSLGHFDAALRALAQIDRASESLCFLSERFTRN
ASCVLGPQVWDGTRILPENQPPGMLLGALFGYAERLYLVQALFYALFLVGVGSVYWQSVTGKPLLPLKSRGGATRTPTA
>Mature_319_residues
MDFAAALPTFAITLREGVEAALVVGIVLACLKKAGHTHLNRWVWGGVAGGLAASTAVGLLFGWLLGNLSTANQKYAPAVE
PLLEGIFGVLAIGMLSWMLIWMTRQARTLKGQVEASVGQALGQERAAGWAIAWLILFTVLREGFETVLFVTSYFRQGFVP
AFGAVAGILVAVAIAVLLFRWGVRIDLRRFFQTMGLLLLLIVSGLVVTSLGHFDAALRALAQIDRASESLCFLSERFTRN
ASCVLGPQVWDGTRILPENQPPGMLLGALFGYAERLYLVQALFYALFLVGVGSVYWQSVTGKPLLPLKSRGGATRTPTA

Specific function: Unknown

COG id: COG0672

COG function: function code P; High-affinity Fe2+/Pb2+ permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005217
- InterPro:   IPR004923 [H]

Pfam domain/function: PF03239 FTR1 [H]

EC number: NA

Molecular weight: Translated: 34368; Mature: 34368

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFAAALPTFAITLREGVEAALVVGIVLACLKKAGHTHLNRWVWGGVAGGLAASTAVGLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FGWLLGNLSTANQKYAPAVEPLLEGIFGVLAIGMLSWMLIWMTRQARTLKGQVEASVGQA
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGQERAAGWAIAWLILFTVLREGFETVLFVTSYFRQGFVPAFGAVAGILVAVAIAVLLFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
WGVRIDLRRFFQTMGLLLLLIVSGLVVTSLGHFDAALRALAQIDRASESLCFLSERFTRN
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ASCVLGPQVWDGTRILPENQPPGMLLGALFGYAERLYLVQALFYALFLVGVGSVYWQSVT
CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GKPLLPLKSRGGATRTPTA
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDFAAALPTFAITLREGVEAALVVGIVLACLKKAGHTHLNRWVWGGVAGGLAASTAVGLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FGWLLGNLSTANQKYAPAVEPLLEGIFGVLAIGMLSWMLIWMTRQARTLKGQVEASVGQA
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGQERAAGWAIAWLILFTVLREGFETVLFVTSYFRQGFVPAFGAVAGILVAVAIAVLLFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
WGVRIDLRRFFQTMGLLLLLIVSGLVVTSLGHFDAALRALAQIDRASESLCFLSERFTRN
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ASCVLGPQVWDGTRILPENQPPGMLLGALFGYAERLYLVQALFYALFLVGVGSVYWQSVT
CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GKPLLPLKSRGGATRTPTA
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]