Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

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The map label for this gene is ybjT [C]

Identifier: 37522826

GI number: 37522826

Start: 3461405

End: 3462373

Strand: Direct

Name: ybjT [C]

Synonym: glr3257

Alternate gene names: 37522826

Gene position: 3461405-3462373 (Clockwise)

Preceding gene: 37522825

Following gene: 37522832

Centisome position: 74.29

GC content: 60.99

Gene sequence:

>969_bases
ATGAAGATCCTGGTGATGGGTGCGACGGGCAACCTGGGACGGCAGGTCGTGCGGCGGGCGATCGACGAGGGGCATACGGT
CCGCTGCGGGGTGCGCAACCGCGAGAAAGCCCAGTTTCTGGAGCAGTGGGGAGCGCAACTGTTCGGCGGCGACCTGCGCG
AGGCGGACTGCTACGAGCCGCTGCTTGCCGATATGGAGGCGGTGATCCTGACGGCCAGCGCCCTGGCCAGCCGCGACGGG
CGCGACAAGACCAACAACATCGACAACGTGGATGATGCCGGCATGCGCGCCTTTATCGACGCAATGCGCGGCCGACCCCT
CCAGCGGGCGGTCTACACTTCTGTACTGCGCTGCGACGAATTTCCCGACAGCAAGATGATGCGCACCAAGCACAAAGTCG
AGGAGCACCTGGAGCGCTCGGGTGTACCCTACACCATCCTGCGGCTGAGTGCTTTCATGCAGGGGCTCATTCCCGAATTT
GCCCTGCCGATTCTGGAGAAAAAACCCGTGCGCATCCAGCGCAACCCTTCGCCGATTGCCTACATCAGCACCCTGGATGC
GGCAAAGTTCGCGGTGGCCGCCTGCACCCTCCCCATCCTCAATAACCGCACCATCGGCGTGAGCGGCCCCGAAGTCTGGG
ATGTCCAGGCCATCATCAAGCTGTGCGACGATCTGTCCGGCGTCAAGCAGATACCCAAGGTGAGCATTCTTTCTGAAGGC
CAGAAGCGCATCAACGAACTATTGGCCAGAATGCTGAACCCAAATCTTATCGAGCTGTTGCGCTTCAGCGAGGCGTTCGC
CACCGGCCAGACCTACAGCGCCGATATGGACGCGGCGGGAGAGCTGTTCGGCATTCCCGCCACGTCGCTAACCAAGGTAG
AACCATTCCTGCAGGAGTACTTCGCAATTATCAAGCGGCGTTTGCGCGAAAAGAACTATCAGGAGCCCAAGGTCAAGTCG
CCTTTCTAG

Upstream 100 bases:

>100_bases
ATTTCGGTGGACGAAGTCGATTTATTGTTGGATCTCTAAAACCTGATCCCCACTTCTGAGAGGGCTGTAACATTTTGTTA
TAAGCAGTGGGACGGTAACG

Downstream 100 bases:

>100_bases
AGTAGGTGTCAGGATAAGAACCCTTGTCCGTTGAGATCTTCAAGACAACCTTTTCGCCGCAGCCGCCTACCTTTCCAACC
TGCGCCAGGCCCACACCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NmrA-Like Family; Nucleoside-Diphosphate-Sugar Epimerase; NmrA-Like; NAD Dependent Epimerase/Dehydratase Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NmrA-Like Family Protein; DTDP-Glucose-46-Dehydratase; NAD Dependent Epimerase/Dehydratase

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MKILVMGATGNLGRQVVRRAIDEGHTVRCGVRNREKAQFLEQWGAQLFGGDLREADCYEPLLADMEAVILTASALASRDG
RDKTNNIDNVDDAGMRAFIDAMRGRPLQRAVYTSVLRCDEFPDSKMMRTKHKVEEHLERSGVPYTILRLSAFMQGLIPEF
ALPILEKKPVRIQRNPSPIAYISTLDAAKFAVAACTLPILNNRTIGVSGPEVWDVQAIIKLCDDLSGVKQIPKVSILSEG
QKRINELLARMLNPNLIELLRFSEAFATGQTYSADMDAAGELFGIPATSLTKVEPFLQEYFAIIKRRLREKNYQEPKVKS
PF

Sequences:

>Translated_322_residues
MKILVMGATGNLGRQVVRRAIDEGHTVRCGVRNREKAQFLEQWGAQLFGGDLREADCYEPLLADMEAVILTASALASRDG
RDKTNNIDNVDDAGMRAFIDAMRGRPLQRAVYTSVLRCDEFPDSKMMRTKHKVEEHLERSGVPYTILRLSAFMQGLIPEF
ALPILEKKPVRIQRNPSPIAYISTLDAAKFAVAACTLPILNNRTIGVSGPEVWDVQAIIKLCDDLSGVKQIPKVSILSEG
QKRINELLARMLNPNLIELLRFSEAFATGQTYSADMDAAGELFGIPATSLTKVEPFLQEYFAIIKRRLREKNYQEPKVKS
PF
>Mature_322_residues
MKILVMGATGNLGRQVVRRAIDEGHTVRCGVRNREKAQFLEQWGAQLFGGDLREADCYEPLLADMEAVILTASALASRDG
RDKTNNIDNVDDAGMRAFIDAMRGRPLQRAVYTSVLRCDEFPDSKMMRTKHKVEEHLERSGVPYTILRLSAFMQGLIPEF
ALPILEKKPVRIQRNPSPIAYISTLDAAKFAVAACTLPILNNRTIGVSGPEVWDVQAIIKLCDDLSGVKQIPKVSILSEG
QKRINELLARMLNPNLIELLRFSEAFATGQTYSADMDAAGELFGIPATSLTKVEPFLQEYFAIIKRRLREKNYQEPKVKS
PF

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36011; Mature: 36011

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVMGATGNLGRQVVRRAIDEGHTVRCGVRNREKAQFLEQWGAQLFGGDLREADCYEP
CEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
LLADMEAVILTASALASRDGRDKTNNIDNVDDAGMRAFIDAMRGRPLQRAVYTSVLRCDE
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
FPDSKMMRTKHKVEEHLERSGVPYTILRLSAFMQGLIPEFALPILEKKPVRIQRNPSPIA
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEE
YISTLDAAKFAVAACTLPILNNRTIGVSGPEVWDVQAIIKLCDDLSGVKQIPKVSILSEG
EEEHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
QKRINELLARMLNPNLIELLRFSEAFATGQTYSADMDAAGELFGIPATSLTKVEPFLQEY
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHH
FAIIKRRLREKNYQEPKVKSPF
HHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKILVMGATGNLGRQVVRRAIDEGHTVRCGVRNREKAQFLEQWGAQLFGGDLREADCYEP
CEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
LLADMEAVILTASALASRDGRDKTNNIDNVDDAGMRAFIDAMRGRPLQRAVYTSVLRCDE
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
FPDSKMMRTKHKVEEHLERSGVPYTILRLSAFMQGLIPEFALPILEKKPVRIQRNPSPIA
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEE
YISTLDAAKFAVAACTLPILNNRTIGVSGPEVWDVQAIIKLCDDLSGVKQIPKVSILSEG
EEEHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
QKRINELLARMLNPNLIELLRFSEAFATGQTYSADMDAAGELFGIPATSLTKVEPFLQEY
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHH
FAIIKRRLREKNYQEPKVKSPF
HHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA