| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is ybjT [C]
Identifier: 37522826
GI number: 37522826
Start: 3461405
End: 3462373
Strand: Direct
Name: ybjT [C]
Synonym: glr3257
Alternate gene names: 37522826
Gene position: 3461405-3462373 (Clockwise)
Preceding gene: 37522825
Following gene: 37522832
Centisome position: 74.29
GC content: 60.99
Gene sequence:
>969_bases ATGAAGATCCTGGTGATGGGTGCGACGGGCAACCTGGGACGGCAGGTCGTGCGGCGGGCGATCGACGAGGGGCATACGGT CCGCTGCGGGGTGCGCAACCGCGAGAAAGCCCAGTTTCTGGAGCAGTGGGGAGCGCAACTGTTCGGCGGCGACCTGCGCG AGGCGGACTGCTACGAGCCGCTGCTTGCCGATATGGAGGCGGTGATCCTGACGGCCAGCGCCCTGGCCAGCCGCGACGGG CGCGACAAGACCAACAACATCGACAACGTGGATGATGCCGGCATGCGCGCCTTTATCGACGCAATGCGCGGCCGACCCCT CCAGCGGGCGGTCTACACTTCTGTACTGCGCTGCGACGAATTTCCCGACAGCAAGATGATGCGCACCAAGCACAAAGTCG AGGAGCACCTGGAGCGCTCGGGTGTACCCTACACCATCCTGCGGCTGAGTGCTTTCATGCAGGGGCTCATTCCCGAATTT GCCCTGCCGATTCTGGAGAAAAAACCCGTGCGCATCCAGCGCAACCCTTCGCCGATTGCCTACATCAGCACCCTGGATGC GGCAAAGTTCGCGGTGGCCGCCTGCACCCTCCCCATCCTCAATAACCGCACCATCGGCGTGAGCGGCCCCGAAGTCTGGG ATGTCCAGGCCATCATCAAGCTGTGCGACGATCTGTCCGGCGTCAAGCAGATACCCAAGGTGAGCATTCTTTCTGAAGGC CAGAAGCGCATCAACGAACTATTGGCCAGAATGCTGAACCCAAATCTTATCGAGCTGTTGCGCTTCAGCGAGGCGTTCGC CACCGGCCAGACCTACAGCGCCGATATGGACGCGGCGGGAGAGCTGTTCGGCATTCCCGCCACGTCGCTAACCAAGGTAG AACCATTCCTGCAGGAGTACTTCGCAATTATCAAGCGGCGTTTGCGCGAAAAGAACTATCAGGAGCCCAAGGTCAAGTCG CCTTTCTAG
Upstream 100 bases:
>100_bases ATTTCGGTGGACGAAGTCGATTTATTGTTGGATCTCTAAAACCTGATCCCCACTTCTGAGAGGGCTGTAACATTTTGTTA TAAGCAGTGGGACGGTAACG
Downstream 100 bases:
>100_bases AGTAGGTGTCAGGATAAGAACCCTTGTCCGTTGAGATCTTCAAGACAACCTTTTCGCCGCAGCCGCCTACCTTTCCAACC TGCGCCAGGCCCACACCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NmrA-Like Family; Nucleoside-Diphosphate-Sugar Epimerase; NmrA-Like; NAD Dependent Epimerase/Dehydratase Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NmrA-Like Family Protein; DTDP-Glucose-46-Dehydratase; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MKILVMGATGNLGRQVVRRAIDEGHTVRCGVRNREKAQFLEQWGAQLFGGDLREADCYEPLLADMEAVILTASALASRDG RDKTNNIDNVDDAGMRAFIDAMRGRPLQRAVYTSVLRCDEFPDSKMMRTKHKVEEHLERSGVPYTILRLSAFMQGLIPEF ALPILEKKPVRIQRNPSPIAYISTLDAAKFAVAACTLPILNNRTIGVSGPEVWDVQAIIKLCDDLSGVKQIPKVSILSEG QKRINELLARMLNPNLIELLRFSEAFATGQTYSADMDAAGELFGIPATSLTKVEPFLQEYFAIIKRRLREKNYQEPKVKS PF
Sequences:
>Translated_322_residues MKILVMGATGNLGRQVVRRAIDEGHTVRCGVRNREKAQFLEQWGAQLFGGDLREADCYEPLLADMEAVILTASALASRDG RDKTNNIDNVDDAGMRAFIDAMRGRPLQRAVYTSVLRCDEFPDSKMMRTKHKVEEHLERSGVPYTILRLSAFMQGLIPEF ALPILEKKPVRIQRNPSPIAYISTLDAAKFAVAACTLPILNNRTIGVSGPEVWDVQAIIKLCDDLSGVKQIPKVSILSEG QKRINELLARMLNPNLIELLRFSEAFATGQTYSADMDAAGELFGIPATSLTKVEPFLQEYFAIIKRRLREKNYQEPKVKS PF >Mature_322_residues MKILVMGATGNLGRQVVRRAIDEGHTVRCGVRNREKAQFLEQWGAQLFGGDLREADCYEPLLADMEAVILTASALASRDG RDKTNNIDNVDDAGMRAFIDAMRGRPLQRAVYTSVLRCDEFPDSKMMRTKHKVEEHLERSGVPYTILRLSAFMQGLIPEF ALPILEKKPVRIQRNPSPIAYISTLDAAKFAVAACTLPILNNRTIGVSGPEVWDVQAIIKLCDDLSGVKQIPKVSILSEG QKRINELLARMLNPNLIELLRFSEAFATGQTYSADMDAAGELFGIPATSLTKVEPFLQEYFAIIKRRLREKNYQEPKVKS PF
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36011; Mature: 36011
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILVMGATGNLGRQVVRRAIDEGHTVRCGVRNREKAQFLEQWGAQLFGGDLREADCYEP CEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH LLADMEAVILTASALASRDGRDKTNNIDNVDDAGMRAFIDAMRGRPLQRAVYTSVLRCDE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC FPDSKMMRTKHKVEEHLERSGVPYTILRLSAFMQGLIPEFALPILEKKPVRIQRNPSPIA CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEE YISTLDAAKFAVAACTLPILNNRTIGVSGPEVWDVQAIIKLCDDLSGVKQIPKVSILSEG EEEHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QKRINELLARMLNPNLIELLRFSEAFATGQTYSADMDAAGELFGIPATSLTKVEPFLQEY HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHH FAIIKRRLREKNYQEPKVKSPF HHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKILVMGATGNLGRQVVRRAIDEGHTVRCGVRNREKAQFLEQWGAQLFGGDLREADCYEP CEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH LLADMEAVILTASALASRDGRDKTNNIDNVDDAGMRAFIDAMRGRPLQRAVYTSVLRCDE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC FPDSKMMRTKHKVEEHLERSGVPYTILRLSAFMQGLIPEFALPILEKKPVRIQRNPSPIA CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEE YISTLDAAKFAVAACTLPILNNRTIGVSGPEVWDVQAIIKLCDDLSGVKQIPKVSILSEG EEEHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QKRINELLARMLNPNLIELLRFSEAFATGQTYSADMDAAGELFGIPATSLTKVEPFLQEY HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHH FAIIKRRLREKNYQEPKVKSPF HHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA