Click here to switch to the map view.

The map label for this gene is lumQ [H]

Identifier: 37522796

GI number: 37522796

Start: 3433179

End: 3434066

Strand: Reverse

Name: lumQ [H]

Synonym: gll3227

Alternate gene names: 37522796

Gene position: 3434066-3433179 (Counterclockwise)

Preceding gene: 37522800

Following gene: 37522795

Centisome position: 73.71

GC content: 46.96

Gene sequence:

>888_bases
ATGACTGCGAGCTCCCGCTTCATCGACTTCACTCAAGAAGACCAGCTCTCCTTGCCCTGCTTACCCCTTGTGTCCAGTTG
CAGAGCTGGGTGGAATAGAATTCAGTTGGCTCTCTATCGCCAGCCGCCTTACTGCATTCCTGAACACTATTCCCCCCATC
ACGTTATCTGCATCAACGCCGGCACTCCGGTTACGCTTCAACAGACCGTAGATGGAAAATCAAAGACCATCGATTCGATT
CCAGGAGGCGTTGGCATTTATCCAGCCAATCGTTGGCAAACTTTCTATTGGCATCAAGAGGCCGAGTTTTTGCAACTCTA
TCTGGAGCCGATGCTGCTTAATCAGTTGGGAACAGAGCTATATGATAAAGATCAGATCGAATTAATTCCACAGTTGACAT
CGTGTATTGATCCATTGATTTATCAGATTGCGATCGCTCTTAAAACAACATTAGAAACCGATGGTGTCGGCAGTAAACTT
TATTCTGATTTAATGGCAAACGCCCTGGCTGTCCACATTTTATGTCGGTATTCAACAAACAAATCAAGTATTCAGCATGA
CTCAGGAAGGCTGTCTGATCAACAGCTGGATCGGGTCATTAACTACATTGATGAGCATCTAGATCAAAATTTAAGCTTGG
CTGAATTAGCGGCCCTAGCTCGACTGAGTTCCTATCACTTTGCCCGTCTATTCAAGCGATCCACAGGTATCGCACCTCAC
CAATATCACATTCGACGCCGCGTCGAACGTGCTAAGCGGCTACTTTTGGCAAGGGAGTTGAGTATTGCAGAAGTTGCCCA
GGTTGTTGGGTTTGCCAGCCAAGGACATCTCAACTACCATTTCAAGCGTGTCGTTGGGATAGCTCCCAAAGCGTTTTTGC
GGCAGTAG

Upstream 100 bases:

>100_bases
TTGCGTCCACTGCTGCCAGTGGGCGCGAGGATCAGTAGGACGATTGCCGCTTGTAAGCGTAAAGTTAAACTGTCTACTGC
CAATAGGACGATGGGCTTGT

Downstream 100 bases:

>100_bases
CAAGAACTTAGAAAAACAGCGCAAAAACCTTGAATACAGCCGATTGCTTCATTTTCGATACTGAGTGCAAGACAAACAAA
CATCGAAATCGAGGTTAACG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTASSRFIDFTQEDQLSLPCLPLVSSCRAGWNRIQLALYRQPPYCIPEHYSPHHVICINAGTPVTLQQTVDGKSKTIDSI
PGGVGIYPANRWQTFYWHQEAEFLQLYLEPMLLNQLGTELYDKDQIELIPQLTSCIDPLIYQIAIALKTTLETDGVGSKL
YSDLMANALAVHILCRYSTNKSSIQHDSGRLSDQQLDRVINYIDEHLDQNLSLAELAALARLSSYHFARLFKRSTGIAPH
QYHIRRRVERAKRLLLARELSIAEVAQVVGFASQGHLNYHFKRVVGIAPKAFLRQ

Sequences:

>Translated_295_residues
MTASSRFIDFTQEDQLSLPCLPLVSSCRAGWNRIQLALYRQPPYCIPEHYSPHHVICINAGTPVTLQQTVDGKSKTIDSI
PGGVGIYPANRWQTFYWHQEAEFLQLYLEPMLLNQLGTELYDKDQIELIPQLTSCIDPLIYQIAIALKTTLETDGVGSKL
YSDLMANALAVHILCRYSTNKSSIQHDSGRLSDQQLDRVINYIDEHLDQNLSLAELAALARLSSYHFARLFKRSTGIAPH
QYHIRRRVERAKRLLLARELSIAEVAQVVGFASQGHLNYHFKRVVGIAPKAFLRQ
>Mature_294_residues
TASSRFIDFTQEDQLSLPCLPLVSSCRAGWNRIQLALYRQPPYCIPEHYSPHHVICINAGTPVTLQQTVDGKSKTIDSIP
GGVGIYPANRWQTFYWHQEAEFLQLYLEPMLLNQLGTELYDKDQIELIPQLTSCIDPLIYQIAIALKTTLETDGVGSKLY
SDLMANALAVHILCRYSTNKSSIQHDSGRLSDQQLDRVINYIDEHLDQNLSLAELAALARLSSYHFARLFKRSTGIAPHQ
YHIRRRVERAKRLLLARELSIAEVAQVVGFASQGHLNYHFKRVVGIAPKAFLRQ

Specific function: Probable transcriptional regulator. Its target gene(s) is not yet known [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI226510985, Length=198, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 33474; Mature: 33343

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASSRFIDFTQEDQLSLPCLPLVSSCRAGWNRIQLALYRQPPYCIPEHYSPHHVICINA
CCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEC
GTPVTLQQTVDGKSKTIDSIPGGVGIYPANRWQTFYWHQEAEFLQLYLEPMLLNQLGTEL
CCCEEEEECCCCCHHHHHHCCCCCEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
YDKDQIELIPQLTSCIDPLIYQIAIALKTTLETDGVGSKLYSDLMANALAVHILCRYSTN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCC
KSSIQHDSGRLSDQQLDRVINYIDEHLDQNLSLAELAALARLSSYHFARLFKRSTGIAPH
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
QYHIRRRVERAKRLLLARELSIAEVAQVVGFASQGHLNYHFKRVVGIAPKAFLRQ
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure 
TASSRFIDFTQEDQLSLPCLPLVSSCRAGWNRIQLALYRQPPYCIPEHYSPHHVICINA
CCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEC
GTPVTLQQTVDGKSKTIDSIPGGVGIYPANRWQTFYWHQEAEFLQLYLEPMLLNQLGTEL
CCCEEEEECCCCCHHHHHHCCCCCEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
YDKDQIELIPQLTSCIDPLIYQIAIALKTTLETDGVGSKLYSDLMANALAVHILCRYSTN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCC
KSSIQHDSGRLSDQQLDRVINYIDEHLDQNLSLAELAALARLSSYHFARLFKRSTGIAPH
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
QYHIRRRVERAKRLLLARELSIAEVAQVVGFASQGHLNYHFKRVVGIAPKAFLRQ
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7503752 [H]