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The map label for this gene is yqxC [H]

Identifier: 37522750

GI number: 37522750

Start: 3390090

End: 3390908

Strand: Reverse

Name: yqxC [H]

Synonym: gll3181

Alternate gene names: 37522750

Gene position: 3390908-3390090 (Counterclockwise)

Preceding gene: 37522751

Following gene: 37522744

Centisome position: 72.78

GC content: 66.42

Gene sequence:

>819_bases
ATGGCCGAGCGACCGGCGCGCCTCAGGCTCGATCAGATCCTGGTCGAACGGGGCCTGGCCGAAAGCCGCCAGAAAGCCCA
GGCTCTGATCCGGGCCGGACAGGTGCGCGTGGGCGGCGAGCGGTTCGACAAGCCCGGTTCGCTGTGCCCGGTCGATAGCG
AAGTGTCGGTGGCAGCCGGTTCGCCCTTCGTCTCGCGCGGCGGCGAGAAGCTCACGGGGGCGCTCGCCCGCTTTGATGTG
CATATCGAGGGCCGCGTCTGCCTGGATGGCGGCATCTCCACCGGCGGATTTGCCGATTGTCTGCTGCAGCGGGGGGCAGC
GCGGGTCTACGGTATCGACGTGGGTTACGGTCAGGTGGCCTGGAAACTGCGCACCGACCCGCGCGTCGTGCTCAAAGAAC
GTACCAACCTGCGCCATTTAAGGCCTGCCGAACTCTACGGCCCGGGCGATCCCTGGCCGGATCTGGCGACGGCGGATCTG
TCGTTCATCTCGCTCAAGCTGGTGCTCGGCCCCATCTGGCAATTGCTGCTGGTGCCGCGCGAAGTGCTGCTCCTCGTCAA
GCCGCAGTTCGAAGCAGGACGGGAGCGCGTCGGCAAGAACGGCGTCGTGCGCGATCCGGCTGTCCACCGAGAGGTGATAG
CCGATGTCTGGTCTGTCTCACAAGCCCTCGGTTGGGGTTTTCGAGGGCTCTGCCCGTCTCCGATCACCGGACCTGCCGGC
AATCGCGAGTACTGGCTGTGGTTGTCAATGGAGGCAGGCCACTTCCTGGCTCCGGAGACGATCGAGGCGGTCGTGCGCGA
AGTGGCAGCGACGCGTTAG

Upstream 100 bases:

>100_bases
CGAACTGCAGAACGAGGACGAAGTGTACATGCTCCAGTTTGGGCAAAACTTTGCCCAGGGCCAGGTCGCCGCCGGTCTGC
CCCTGGAAGGGGACTAGACC

Downstream 100 bases:

>100_bases
CTAGGAAGTGGCAGCTTGGCGGCGGCGGCTTGATCGAGCATCCAGAAGCGTTCGCCGTCGGCGGGATCGATAAGGGCACT
CGGGTAGGTGGTGTCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MAERPARLRLDQILVERGLAESRQKAQALIRAGQVRVGGERFDKPGSLCPVDSEVSVAAGSPFVSRGGEKLTGALARFDV
HIEGRVCLDGGISTGGFADCLLQRGAARVYGIDVGYGQVAWKLRTDPRVVLKERTNLRHLRPAELYGPGDPWPDLATADL
SFISLKLVLGPIWQLLLVPREVLLLVKPQFEAGRERVGKNGVVRDPAVHREVIADVWSVSQALGWGFRGLCPSPITGPAG
NREYWLWLSMEAGHFLAPETIEAVVREVAATR

Sequences:

>Translated_272_residues
MAERPARLRLDQILVERGLAESRQKAQALIRAGQVRVGGERFDKPGSLCPVDSEVSVAAGSPFVSRGGEKLTGALARFDV
HIEGRVCLDGGISTGGFADCLLQRGAARVYGIDVGYGQVAWKLRTDPRVVLKERTNLRHLRPAELYGPGDPWPDLATADL
SFISLKLVLGPIWQLLLVPREVLLLVKPQFEAGRERVGKNGVVRDPAVHREVIADVWSVSQALGWGFRGLCPSPITGPAG
NREYWLWLSMEAGHFLAPETIEAVVREVAATR
>Mature_271_residues
AERPARLRLDQILVERGLAESRQKAQALIRAGQVRVGGERFDKPGSLCPVDSEVSVAAGSPFVSRGGEKLTGALARFDVH
IEGRVCLDGGISTGGFADCLLQRGAARVYGIDVGYGQVAWKLRTDPRVVLKERTNLRHLRPAELYGPGDPWPDLATADLS
FISLKLVLGPIWQLLLVPREVLLLVKPQFEAGRERVGKNGVVRDPAVHREVIADVWSVSQALGWGFRGLCPSPITGPAGN
REYWLWLSMEAGHFLAPETIEAVVREVAATR

Specific function: Unknown

COG id: COG1189

COG function: function code J; Predicted rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004538
- InterPro:   IPR002877
- InterPro:   IPR002942 [H]

Pfam domain/function: PF01728 FtsJ; PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 29685; Mature: 29553

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERPARLRLDQILVERGLAESRQKAQALIRAGQVRVGGERFDKPGSLCPVDSEVSVAAG
CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEECHHHCCCCCCCCCCCCCCEEECC
SPFVSRGGEKLTGALARFDVHIEGRVCLDGGISTGGFADCLLQRGAARVYGIDVGYGQVA
CCHHHCCCHHHHHHHHHEEEEECCEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCEEE
WKLRTDPRVVLKERTNLRHLRPAELYGPGDPWPDLATADLSFISLKLVLGPIWQLLLVPR
EEECCCCEEEECCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
EVLLLVKPQFEAGRERVGKNGVVRDPAVHREVIADVWSVSQALGWGFRGLCPSPITGPAG
HHEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
NREYWLWLSMEAGHFLAPETIEAVVREVAATR
CCEEEEEEEECCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AERPARLRLDQILVERGLAESRQKAQALIRAGQVRVGGERFDKPGSLCPVDSEVSVAAG
CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEECHHHCCCCCCCCCCCCCCEEECC
SPFVSRGGEKLTGALARFDVHIEGRVCLDGGISTGGFADCLLQRGAARVYGIDVGYGQVA
CCHHHCCCHHHHHHHHHEEEEECCEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCEEE
WKLRTDPRVVLKERTNLRHLRPAELYGPGDPWPDLATADLSFISLKLVLGPIWQLLLVPR
EEECCCCEEEECCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
EVLLLVKPQFEAGRERVGKNGVVRDPAVHREVIADVWSVSQALGWGFRGLCPSPITGPAG
HHEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
NREYWLWLSMEAGHFLAPETIEAVVREVAATR
CCEEEEEEEECCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 2507400 [H]