| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is yjhT [C]
Identifier: 37522738
GI number: 37522738
Start: 3377474
End: 3378514
Strand: Reverse
Name: yjhT [C]
Synonym: gll3169
Alternate gene names: 37522738
Gene position: 3378514-3377474 (Counterclockwise)
Preceding gene: 37522740
Following gene: 37522737
Centisome position: 72.52
GC content: 56.77
Gene sequence:
>1041_bases GTGCCGCCCAGACATCTGCTTTCCACGTTGATCATGATATTTTCGCTCGGCACACTATTGTCGCCGGTGCAAAGTCAAGC GCAAAGCCAGCCGCCCTATTGGACCAAAGCCGCACCGCCGACGGTGGCTCGGCAGGAACTGTATCCGGAAGTATTGAACA GAAAAATTTACGTGGTTGGCGGTCTACTCAGTCCAAACACCGGATTCTCGGCCCATTTCGAGTCTTATGATCCTCTTAAC GATGCATGGACCGTATTAAGACCGCTACCCGAAGCACGCCATCACATCACGCTATCGGCGGTGAAGGGTTCGCTCTACGG CGTCGGCGGTTTCACGGGTGGGTTTCCGGACTGGCGCGCACAAAGTACGGTGTTTATATACAATCCTTCCTCCAACACTT GGACCAGAGGCACCGACCTGCCGGTGGCCCGTGCGGAGGGCATTTCCGCGGTGATCGACCACAAAATATACCTGGTTGGC GGGCGCGTTCGGGCCGCTGAGAACGCTCGGCTTTTCGATGACCACATTGACAGTGTGCGAAACGAAGTATTTGATCCGGC GACCGGGCGCTGGTTGGCCCGTGCCGATGCACCGACACCACGAAACAGTGCAGCATCGGCAGTCATTGATGGAAAGATCT ACGTGGTCGGTGGTCGCCAGTTTTTCAAGAATGCCGATGGCACCACGCGGCAAGTCAATGTGCCAAATCTTGAGGTCTAC GATCCGAAACTTGATCGTTGGCAGACGCGCTCGCCGATGCCCCAAGCCCGAGGTGGTCTTGCTGCGACCTCGCTGGGCGG CAAGCTTTACGTTTTTGGCGGCGAACAATGGGTTCCGGAGCAGAAAGTTTTTGCCGAAAGTTGGGTGTACGACCCAAAAA TCGACGTCTGGAAAGCATTGCCGCCCTTGCCAACCCCGCGACACGGATTGGGGGCGTCGGCCGTTGGAGACCGAATTTTT GTTTTTGGCGGCGGAACCAGAACCGGCGGCAATGCAGCCACAGCCATACACGAAGTGCTGGTGTTGCCCCGTGATTTGTA G
Upstream 100 bases:
>100_bases CAGATCAATTCTGCTAAGAGTCTGCCCGCCGCGACTCGGGTCGCTCCGAGTGACTTAACTCACCCACAAATAAAGATATT TGAGCAATGGAGCCTGTATT
Downstream 100 bases:
>100_bases CCCCCATGCCACCGACCCAAACAGAAGCCCAAGTTTCCACGTAGGAGAAATTTCCGGCTCGAAGGATCGCGTGCCCATTG CACCGAATGATTGCGCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Kelch Repeat Protein; Peptidase S8 And; LuxR Family Transcriptional Regulator; Kelch Repeat Type 1-Containing Protein; Protein Kinase; Secreted Protein; Ring Canal Kelch Protein; Kelch Domain Protein; Glycosy Hydrolase Family Protein; NHL Repeat Containing Protein; Ring Canal Kelch-Like Protein; Kelch Repeat Lipoprotein; YD Repeat-Containing Protein; S-Layer Domain Protein; Ig Domain-Containing Domain-Containing Protein; Metallophosphoesterase; Serine/Threonine Protein Kinase; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Regulatory Protein LuxR; Kelch Domain-Containing Protein; Surface Layer Protein; Response Regulator Receiver Protein
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MPPRHLLSTLIMIFSLGTLLSPVQSQAQSQPPYWTKAAPPTVARQELYPEVLNRKIYVVGGLLSPNTGFSAHFESYDPLN DAWTVLRPLPEARHHITLSAVKGSLYGVGGFTGGFPDWRAQSTVFIYNPSSNTWTRGTDLPVARAEGISAVIDHKIYLVG GRVRAAENARLFDDHIDSVRNEVFDPATGRWLARADAPTPRNSAASAVIDGKIYVVGGRQFFKNADGTTRQVNVPNLEVY DPKLDRWQTRSPMPQARGGLAATSLGGKLYVFGGEQWVPEQKVFAESWVYDPKIDVWKALPPLPTPRHGLGASAVGDRIF VFGGGTRTGGNAATAIHEVLVLPRDL
Sequences:
>Translated_346_residues MPPRHLLSTLIMIFSLGTLLSPVQSQAQSQPPYWTKAAPPTVARQELYPEVLNRKIYVVGGLLSPNTGFSAHFESYDPLN DAWTVLRPLPEARHHITLSAVKGSLYGVGGFTGGFPDWRAQSTVFIYNPSSNTWTRGTDLPVARAEGISAVIDHKIYLVG GRVRAAENARLFDDHIDSVRNEVFDPATGRWLARADAPTPRNSAASAVIDGKIYVVGGRQFFKNADGTTRQVNVPNLEVY DPKLDRWQTRSPMPQARGGLAATSLGGKLYVFGGEQWVPEQKVFAESWVYDPKIDVWKALPPLPTPRHGLGASAVGDRIF VFGGGTRTGGNAATAIHEVLVLPRDL >Mature_345_residues PPRHLLSTLIMIFSLGTLLSPVQSQAQSQPPYWTKAAPPTVARQELYPEVLNRKIYVVGGLLSPNTGFSAHFESYDPLND AWTVLRPLPEARHHITLSAVKGSLYGVGGFTGGFPDWRAQSTVFIYNPSSNTWTRGTDLPVARAEGISAVIDHKIYLVGG RVRAAENARLFDDHIDSVRNEVFDPATGRWLARADAPTPRNSAASAVIDGKIYVVGGRQFFKNADGTTRQVNVPNLEVYD PKLDRWQTRSPMPQARGGLAATSLGGKLYVFGGEQWVPEQKVFAESWVYDPKIDVWKALPPLPTPRHGLGASAVGDRIFV FGGGTRTGGNAATAIHEVLVLPRDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI55925604, Length=269, Percent_Identity=29.368029739777, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI14780904, Length=272, Percent_Identity=28.3088235294118, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI55770880, Length=273, Percent_Identity=28.9377289377289, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI284413752, Length=273, Percent_Identity=28.9377289377289, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI65289292, Length=273, Percent_Identity=28.9377289377289, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI65289632, Length=273, Percent_Identity=28.9377289377289, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI24308181, Length=288, Percent_Identity=28.125, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI24475847, Length=288, Percent_Identity=26.7361111111111, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI269973863, Length=288, Percent_Identity=28.125, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI269973871, Length=288, Percent_Identity=28.125, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI269973869, Length=288, Percent_Identity=28.125, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI269973867, Length=288, Percent_Identity=28.125, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI259013520, Length=276, Percent_Identity=28.6231884057971, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI269973865, Length=288, Percent_Identity=28.125, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI17017980, Length=272, Percent_Identity=27.2058823529412, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI17017982, Length=263, Percent_Identity=29.6577946768061, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI45643138, Length=288, Percent_Identity=28.125, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI166235129, Length=270, Percent_Identity=29.6296296296296, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI44680141, Length=292, Percent_Identity=27.7397260273973, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI42741669, Length=283, Percent_Identity=29.6819787985866, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI34101268, Length=277, Percent_Identity=27.7978339350181, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI55741643, Length=299, Percent_Identity=28.4280936454849, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI11056006, Length=314, Percent_Identity=26.1146496815287, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI5174473, Length=248, Percent_Identity=29.8387096774194, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI223890235, Length=259, Percent_Identity=29.7297297297297, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI40018614, Length=293, Percent_Identity=27.9863481228669, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI51479184, Length=246, Percent_Identity=25.2032520325203, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI45269145, Length=274, Percent_Identity=29.1970802919708, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI22027642, Length=274, Percent_Identity=29.1970802919708, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI40255071, Length=266, Percent_Identity=24.0601503759398, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI226442729, Length=254, Percent_Identity=28.740157480315, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI21362105, Length=268, Percent_Identity=28.3582089552239, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI239835722, Length=218, Percent_Identity=31.1926605504587, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI239835724, Length=218, Percent_Identity=31.1926605504587, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI40807500, Length=271, Percent_Identity=26.5682656826568, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI239835720, Length=218, Percent_Identity=31.1926605504587, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI262263388, Length=238, Percent_Identity=30.2521008403361, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI27734909, Length=295, Percent_Identity=26.4406779661017, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI38194229, Length=278, Percent_Identity=27.3381294964029, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI148664209, Length=254, Percent_Identity=26.7716535433071, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI11545731, Length=247, Percent_Identity=28.7449392712551, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI4505461, Length=268, Percent_Identity=27.9850746268657, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI289063409, Length=227, Percent_Identity=27.7533039647577, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI170784846, Length=227, Percent_Identity=27.7533039647577, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI31542246, Length=293, Percent_Identity=25.938566552901, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI24432026, Length=286, Percent_Identity=24.4755244755245, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI109150407, Length=311, Percent_Identity=23.4726688102894, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI8922854, Length=268, Percent_Identity=26.4925373134328, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI156616301, Length=248, Percent_Identity=25.4032258064516, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI8922640, Length=357, Percent_Identity=25.4901960784314, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI148664248, Length=233, Percent_Identity=25.7510729613734, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI194097389, Length=257, Percent_Identity=26.0700389105058, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI256818754, Length=261, Percent_Identity=28.735632183908, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI45593142, Length=225, Percent_Identity=27.5555555555556, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI7662260, Length=196, Percent_Identity=27.5510204081633, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI284413702, Length=256, Percent_Identity=23.046875, Blast_Score=65, Evalue=1e-10, Organism=Caenorhabditis elegans, GI115534570, Length=269, Percent_Identity=27.8810408921933, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17532459, Length=283, Percent_Identity=26.5017667844523, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI25150432, Length=312, Percent_Identity=25.3205128205128, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI25150435, Length=312, Percent_Identity=25.3205128205128, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17569343, Length=307, Percent_Identity=25.7328990228013, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17558890, Length=250, Percent_Identity=23.6, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17542058, Length=215, Percent_Identity=27.4418604651163, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17508613, Length=187, Percent_Identity=30.4812834224599, Blast_Score=71, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17558894, Length=251, Percent_Identity=23.1075697211155, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17561284, Length=246, Percent_Identity=26.4227642276423, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24646172, Length=276, Percent_Identity=28.6231884057971, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI21356823, Length=276, Percent_Identity=28.6231884057971, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI24584043, Length=289, Percent_Identity=31.4878892733564, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI24584926, Length=283, Percent_Identity=28.9752650176678, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI45549017, Length=283, Percent_Identity=28.9752650176678, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI28571155, Length=289, Percent_Identity=27.681660899654, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI45549356, Length=289, Percent_Identity=27.681660899654, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24640793, Length=289, Percent_Identity=27.681660899654, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI28572989, Length=287, Percent_Identity=27.8745644599303, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24647597, Length=287, Percent_Identity=27.8745644599303, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI45551913, Length=287, Percent_Identity=27.8745644599303, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24664829, Length=271, Percent_Identity=25.830258302583, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI19922570, Length=284, Percent_Identity=24.6478873239437, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI28573706, Length=284, Percent_Identity=24.6478873239437, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI24643537, Length=291, Percent_Identity=25.085910652921, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI20129089, Length=291, Percent_Identity=25.085910652921, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI160714879, Length=235, Percent_Identity=25.1063829787234, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI160714877, Length=235, Percent_Identity=25.1063829787234, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI160715163, Length=235, Percent_Identity=25.1063829787234, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37777; Mature: 37646
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPRHLLSTLIMIFSLGTLLSPVQSQAQSQPPYWTKAAPPTVARQELYPEVLNRKIYVVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEE GLLSPNTGFSAHFESYDPLNDAWTVLRPLPEARHHITLSAVKGSLYGVGGFTGGFPDWRA EEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHEEEEEEECCCEEECCCCCCCCCCCCC QSTVFIYNPSSNTWTRGTDLPVARAEGISAVIDHKIYLVGGRVRAAENARLFDDHIDSVR CCEEEEECCCCCCCCCCCCCCCHHHCCCCEEECCEEEEECCEEEECCCCHHHHHHHHHHH NEVFDPATGRWLARADAPTPRNSAASAVIDGKIYVVGGRQFFKNADGTTRQVNVPNLEVY HHHCCCCCCCEEEECCCCCCCCCCCCEEECCEEEEEECHHHHCCCCCCEEEEECCCEEEE DPKLDRWQTRSPMPQARGGLAATSLGGKLYVFGGEQWVPEQKVFAESWVYDPKIDVWKAL CCCCCCCCCCCCCCHHHCCEEEEECCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHCC PPLPTPRHGLGASAVGDRIFVFGGGTRTGGNAATAIHEVLVLPRDL CCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure PPRHLLSTLIMIFSLGTLLSPVQSQAQSQPPYWTKAAPPTVARQELYPEVLNRKIYVVG CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEE GLLSPNTGFSAHFESYDPLNDAWTVLRPLPEARHHITLSAVKGSLYGVGGFTGGFPDWRA EEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHEEEEEEECCCEEECCCCCCCCCCCCC QSTVFIYNPSSNTWTRGTDLPVARAEGISAVIDHKIYLVGGRVRAAENARLFDDHIDSVR CCEEEEECCCCCCCCCCCCCCCHHHCCCCEEECCEEEEECCEEEECCCCHHHHHHHHHHH NEVFDPATGRWLARADAPTPRNSAASAVIDGKIYVVGGRQFFKNADGTTRQVNVPNLEVY HHHCCCCCCCEEEECCCCCCCCCCCCEEECCEEEEEECHHHHCCCCCCEEEEECCCEEEE DPKLDRWQTRSPMPQARGGLAATSLGGKLYVFGGEQWVPEQKVFAESWVYDPKIDVWKAL CCCCCCCCCCCCCCHHHCCEEEEECCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHCC PPLPTPRHGLGASAVGDRIFVFGGGTRTGGNAATAIHEVLVLPRDL CCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA