| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is ycjG [C]
Identifier: 37522668
GI number: 37522668
Start: 3300196
End: 3301266
Strand: Reverse
Name: ycjG [C]
Synonym: gll3099
Alternate gene names: 37522668
Gene position: 3301266-3300196 (Counterclockwise)
Preceding gene: 37522669
Following gene: 37522667
Centisome position: 70.86
GC content: 66.95
Gene sequence:
>1071_bases GTGAAAATCGCCCAGGCCACCGCCCGGGTGGAGGCGTTCGCTCTGGTGCGGCCCTATACCATCGCCCTGCGGCACGTCGG CACCGTCGAGAACGTGATCGTGCAATTGCAGACCGCATCGGGGCTGATCGGTCTGGGGGCGGCTTCTGCGGCTGCGGACG TGACCGGCGAGAGCGATCAAGCCTGCCGCGAAGCGCTATTGGGCGGAGCGATCGGCTGGCTGGTGGGCGAGGACATCCGA GAATTGCCGAAGCTCTGCCGGCGGCTGGGCGAGCGGATGGCAGGCAGGCCCGCCGCGCGGGCGGCGGTCGATATCGCCCT GCACGACCTGTTGGCCCAGCACCTGGGGGTGCCGCTGGTGGCGATGCTGGGCCGCGTCCACACCGGCCTGCCCACCTCGA TCACCATCGGCATCAAACCCCTCGACGAGACGCTCGCCGAGGCCAGGGAGTATCTCGGGCGGGGTTTTCGTATCCTCAAA GTGAAGACCGGCCTCGATCTCGAAGGGGACATCGAGCGGCTTGCCCGCCTGCGTGAACAGGTGGGCGACGCCGTTCACCT GCGCGTCGATCCTAACCAGGGCTACAGCATCGCCGAGGTGGAGCAGTTCGTGCGCCGCACGGCGCATCTATTTCTCGAAT TTCTGGAGCAGCCCATCCCCGCCGGGGACATCGCCGCCCTGCGCGCCTTGCCCCCCGACATCCGCCTCCGCATCGCCGCC GACGAGAGCTTGCTGGATGAACGGGACGCGCTGAAGCTGCTGACTCCCTCCCCAGCCTGCGGCATCTTCAACATCAAACT GATGAAGTGCGGCGGCATCCGCCCGGCTCTAGCCATCGCGGGCCTGGCGGAAATCGCCGGGATCGAGTTGATGTGGGGCT GCATGGACGAGAGCATCGTCAGCATCACCGCGGCGCTCCACGCCGCCCTCGCCTGCCCCGCCACCCGCTATCTCGACCTC GACGGCAGCCTGGATCTAGCCCGCGACGTGGTGACGGGCGGTTTTGTGCTCAAAGACGGTTACCTATCCACCCGCGAAGC GCCCGGTCTGGGCGTTCAATTATTGTCATGA
Upstream 100 bases:
>100_bases TGGTGGAGCAGCTGGCCTTGCCGGTGGTGCGCCCCCTCGAAGAAGGTATAGGCGCCCTGGTGGAACCGATCCGGGCATTC CTCCGTGCGGAGACGGCCCG
Downstream 100 bases:
>100_bases AAAAATGGCTGCCCGTTCTGCTGACATTGCTGCTGCTCTGCACAATGACCATTCCTGGCCGGGCCGATGCGATCGACGAT TATGTCCAGAACCAGATGCG
Product: chloromuconate cycloisomerase
Products: NA
Alternate protein names: AE epimerase; AEE [H]
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKIAQATARVEAFALVRPYTIALRHVGTVENVIVQLQTASGLIGLGAASAAADVTGESDQACREALLGGAIGWLVGEDIR ELPKLCRRLGERMAGRPAARAAVDIALHDLLAQHLGVPLVAMLGRVHTGLPTSITIGIKPLDETLAEAREYLGRGFRILK VKTGLDLEGDIERLARLREQVGDAVHLRVDPNQGYSIAEVEQFVRRTAHLFLEFLEQPIPAGDIAALRALPPDIRLRIAA DESLLDERDALKLLTPSPACGIFNIKLMKCGGIRPALAIAGLAEIAGIELMWGCMDESIVSITAALHAALACPATRYLDL DGSLDLARDVVTGGFVLKDGYLSTREAPGLGVQLLS
Sequences:
>Translated_356_residues MKIAQATARVEAFALVRPYTIALRHVGTVENVIVQLQTASGLIGLGAASAAADVTGESDQACREALLGGAIGWLVGEDIR ELPKLCRRLGERMAGRPAARAAVDIALHDLLAQHLGVPLVAMLGRVHTGLPTSITIGIKPLDETLAEAREYLGRGFRILK VKTGLDLEGDIERLARLREQVGDAVHLRVDPNQGYSIAEVEQFVRRTAHLFLEFLEQPIPAGDIAALRALPPDIRLRIAA DESLLDERDALKLLTPSPACGIFNIKLMKCGGIRPALAIAGLAEIAGIELMWGCMDESIVSITAALHAALACPATRYLDL DGSLDLARDVVTGGFVLKDGYLSTREAPGLGVQLLS >Mature_356_residues MKIAQATARVEAFALVRPYTIALRHVGTVENVIVQLQTASGLIGLGAASAAADVTGESDQACREALLGGAIGWLVGEDIR ELPKLCRRLGERMAGRPAARAAVDIALHDLLAQHLGVPLVAMLGRVHTGLPTSITIGIKPLDETLAEAREYLGRGFRILK VKTGLDLEGDIERLARLREQVGDAVHLRVDPNQGYSIAEVEQFVRRTAHLFLEFLEQPIPAGDIAALRALPPDIRLRIAA DESLLDERDALKLLTPSPACGIFNIKLMKCGGIRPALAIAGLAEIAGIELMWGCMDESIVSITAALHAALACPATRYLDL DGSLDLARDVVTGGFVLKDGYLSTREAPGLGVQLLS
Specific function: Catalyzes the epimerization of L-Ala-D-Glu to L-Ala-L- Glu and has probably a role in the metabolism of the murein peptide, of which L-Ala-D-Glu is a component. Is also able to catalyze the epimerization of L-Ala-D-Asp [H]
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI87081876, Length=236, Percent_Identity=37.2881355932203, Blast_Score=83, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018110 - InterPro: IPR013342 - InterPro: IPR013341 - InterPro: IPR001354 [H]
Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]
EC number: NA
Molecular weight: Translated: 37957; Mature: 37957
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAQATARVEAFALVRPYTIALRHVGTVENVIVQLQTASGLIGLGAASAAADVTGESDQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCCEEECCCCHHHHCCCCCCHH ACREALLGGAIGWLVGEDIRELPKLCRRLGERMAGRPAARAAVDIALHDLLAQHLGVPLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHH AMLGRVHTGLPTSITIGIKPLDETLAEAREYLGRGFRILKVKTGLDLEGDIERLARLREQ HHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHH VGDAVHLRVDPNQGYSIAEVEQFVRRTAHLFLEFLEQPIPAGDIAALRALPPDIRLRIAA CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEC DESLLDERDALKLLTPSPACGIFNIKLMKCGGIRPALAIAGLAEIAGIELMWGCMDESIV CHHHHCCCCCCEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHEEHHHHHHHH SITAALHAALACPATRYLDLDGSLDLARDVVTGGFVLKDGYLSTREAPGLGVQLLS HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCEEECC >Mature Secondary Structure MKIAQATARVEAFALVRPYTIALRHVGTVENVIVQLQTASGLIGLGAASAAADVTGESDQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCCEEECCCCHHHHCCCCCCHH ACREALLGGAIGWLVGEDIRELPKLCRRLGERMAGRPAARAAVDIALHDLLAQHLGVPLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHH AMLGRVHTGLPTSITIGIKPLDETLAEAREYLGRGFRILKVKTGLDLEGDIERLARLREQ HHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHH VGDAVHLRVDPNQGYSIAEVEQFVRRTAHLFLEFLEQPIPAGDIAALRALPPDIRLRIAA CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEC DESLLDERDALKLLTPSPACGIFNIKLMKCGGIRPALAIAGLAEIAGIELMWGCMDESIV CHHHHCCCCCCEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHEEHHHHHHHH SITAALHAALACPATRYLDLDGSLDLARDVVTGGFVLKDGYLSTREAPGLGVQLLS HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]