| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37522618
Identifier: 37522618
GI number: 37522618
Start: 3244230
End: 3244994
Strand: Direct
Name: 37522618
Synonym: glr3049
Alternate gene names: NA
Gene position: 3244230-3244994 (Clockwise)
Preceding gene: 37522617
Following gene: 37522619
Centisome position: 69.63
GC content: 71.24
Gene sequence:
>765_bases ATGGGCGTCACTAGCGCCGCCCTGGGCGAGACTCCCCTGCACCCGCCCGAGGCGGCCGCCGCCCTCGGTTCGACGCTGGT GGTCGCCCCGCACCCGGACGACGAGTCGCTTGGCTGCGGCGGGACCATCGCCCTATTGCGCCGTCTGGGCCTGCCTGTGC GGGTGCTGGTGGTGAGCGACGGCACCCGCTCCCACCCCAACTCCCGGCGCTACCCACCCGCGGCCCTGCGCGCCCTGCGC GAGGCGGAGGCGCGCGCCGCCCTTGCGGTGCTGGGGGTCGCCCCGGCCGCCGTCACGTTTTTGGGCCTCAAGGACGGCGC AGTGCCTTTTGAGGGGGACGCCGATTTTGCCGATGCGCTCGGCCGTTGCCGCCGCTATCTGGCCCAGCTGGAGCCCGTGC GGACCGTCGTGCTGCCCTGGCGGCGCGACCCGCATCCGGATCACCGGGCCGTCTGGAACCTGATGCACCGCGCGAGCGAC GGCTTCACGGCCTTCGCACGCAGCCTCGAATACCCCATCTGGCTGTGGGAGCAAGGTGAACGTTTCCACCGGCCGATGGA AGGCGAGGTCTGTATCTGGCGGCTCGCCATCGGCCCGGTGTTGGCGCTCAAACGCGCCGCCGTGGCCGCCCACCGTTCCC AGACCAGCGATCTCATCGACGACGACCCGGAAGGTTTTCGGCTCACCCCCGAGACGCTCACCCACTTCGAGCGCCCCTGG GAATGTTACCTGGAGGCACCATGCAACCCGAACGCCCCTCGCTGA
Upstream 100 bases:
>100_bases CTGACGCTCTATTTGCGCCAGCCCGCCCCAGATGCGGCCCTTGCCCAACTGGGTACCTACGTCATCGAACAAAACGCTCC CATTCAGGCGCTGTGGCACG
Downstream 100 bases:
>100_bases TGCCCGAGTACTTTGAAGCGCTCTACTGCGAAAACGCCGACCCCTGGGACTTCGAGACCAGCCCCTACGAGGATGCCAAA TACACGGCGACCCTCGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: LmbE-Like Protein
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MGVTSAALGETPLHPPEAAAALGSTLVVAPHPDDESLGCGGTIALLRRLGLPVRVLVVSDGTRSHPNSRRYPPAALRALR EAEARAALAVLGVAPAAVTFLGLKDGAVPFEGDADFADALGRCRRYLAQLEPVRTVVLPWRRDPHPDHRAVWNLMHRASD GFTAFARSLEYPIWLWEQGERFHRPMEGEVCIWRLAIGPVLALKRAAVAAHRSQTSDLIDDDPEGFRLTPETLTHFERPW ECYLEAPCNPNAPR
Sequences:
>Translated_254_residues MGVTSAALGETPLHPPEAAAALGSTLVVAPHPDDESLGCGGTIALLRRLGLPVRVLVVSDGTRSHPNSRRYPPAALRALR EAEARAALAVLGVAPAAVTFLGLKDGAVPFEGDADFADALGRCRRYLAQLEPVRTVVLPWRRDPHPDHRAVWNLMHRASD GFTAFARSLEYPIWLWEQGERFHRPMEGEVCIWRLAIGPVLALKRAAVAAHRSQTSDLIDDDPEGFRLTPETLTHFERPW ECYLEAPCNPNAPR >Mature_253_residues GVTSAALGETPLHPPEAAAALGSTLVVAPHPDDESLGCGGTIALLRRLGLPVRVLVVSDGTRSHPNSRRYPPAALRALRE AEARAALAVLGVAPAAVTFLGLKDGAVPFEGDADFADALGRCRRYLAQLEPVRTVVLPWRRDPHPDHRAVWNLMHRASDG FTAFARSLEYPIWLWEQGERFHRPMEGEVCIWRLAIGPVLALKRAAVAAHRSQTSDLIDDDPEGFRLTPETLTHFERPWE CYLEAPCNPNAPR
Specific function: Unknown
COG id: COG2120
COG function: function code S; Uncharacterized proteins, LmbE homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27819; Mature: 27688
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVTSAALGETPLHPPEAAAALGSTLVVAPHPDDESLGCGGTIALLRRLGLPVRVLVVSD CCCCCCCCCCCCCCCCHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECC GTRSHPNSRRYPPAALRALREAEARAALAVLGVAPAAVTFLGLKDGAVPFEGDADFADAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHH GRCRRYLAQLEPVRTVVLPWRRDPHPDHRAVWNLMHRASDGFTAFARSLEYPIWLWEQGE HHHHHHHHHHCCHHEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCCH RFHRPMEGEVCIWRLAIGPVLALKRAAVAAHRSQTSDLIDDDPEGFRLTPETLTHFERPW HHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECHHHHHHCCCCC ECYLEAPCNPNAPR EEEEECCCCCCCCC >Mature Secondary Structure GVTSAALGETPLHPPEAAAALGSTLVVAPHPDDESLGCGGTIALLRRLGLPVRVLVVSD CCCCCCCCCCCCCCCHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECC GTRSHPNSRRYPPAALRALREAEARAALAVLGVAPAAVTFLGLKDGAVPFEGDADFADAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHH GRCRRYLAQLEPVRTVVLPWRRDPHPDHRAVWNLMHRASDGFTAFARSLEYPIWLWEQGE HHHHHHHHHHCCHHEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCCH RFHRPMEGEVCIWRLAIGPVLALKRAAVAAHRSQTSDLIDDDPEGFRLTPETLTHFERPW HHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECHHHHHHCCCCC ECYLEAPCNPNAPR EEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA