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The map label for this gene is bcd [H]

Identifier: 37522617

GI number: 37522617

Start: 3243002

End: 3244243

Strand: Direct

Name: bcd [H]

Synonym: glr3048

Alternate gene names: 37522617

Gene position: 3243002-3244243 (Clockwise)

Preceding gene: 37522616

Following gene: 37522618

Centisome position: 69.61

GC content: 67.31

Gene sequence:

>1242_bases
ATGATCTGCCATGGAGATTATCATCCGTTGAAGAGGAGCAAAGACATTACCCCTCCGCTGTTGTTCAACACTGCGGCCGT
CGGCCGCGAGCCGCTGTCGGTGGGCGAAGCGCTCACCCGAGCCGGGCAAGTCGCCGATTTTTGCGCCGCCAACGCCGCGC
GCATCGACGAAGACGGCGCCGTGCCGATCGAAGAATTTCGGCGGCTGGCAGCGGCGGGACTGTTGGCCGTTCCCCTCGAT
GCGTCTTTGGGCGGGGCTGGACTCGGGGTGAGCCCCGGCCGCACGCTGGCGCTGCTGAGCGTGCTGGAGCAGGTCGGGCG
GGGCAACCTGGCGGTGGGCCGCATCTACGAGGGGCACGTCAACGCCCTGCAGCTGATTCAGATTTTCGGCTCGCGCGAGC
AACAGTCGGCCTGTGCCGCAGCCGTGCACGGCGGCAAAATTTACAACGTCTGGAACACCGAGGACGAGGACGGCACGAAG
ATTGTCCCGCTGCCGGGGGACCGCTATCGCCTGGAGGGGGCTAAGACCTTCGCCTCGGGCACCGGGTTGGTGGAGCGGCC
GATCATCGGTGCGGCCCGACCCGACGGCGGCTGGCAGATGGTGATCGTTCCGATGGAACTGTACACGGGGCGCGTCGATC
CTGACTGGTGGCAACCGCTCGGGATGCGCGCCTCGGCCAGCTTCAAAGTCGATTTTTCGGGCATCGAGCTGGGAGAAGAC
GCCCTGCTGGGCGTTCGCGGCGATTATTTGCGCCAGCCCTGGCTGACCGCCGGGGTGGTGCGCTTCGCAGCGGTGCAGTT
GGGCGGAGCGGCGGCCCTGCTCGACTGCACCCGCGAACACCTGAGAAACCGCGGCTGGCAAGAACACCCCTACCAGCGCG
AGCGCATGGCCCGCGCTGCCATCGCTGTCGAAGGGGGACGCCTGTGGTTGCAGGGGGCGGCCGAGCGCATCGACCGGTGG
TTGGACAATCCGGCCGGGCCAGCCGGCGGCGAGGGGTTGGTGGCCTACGCCAACATGGTGCGCACCGCCGTCGAAGCCGC
CTGTCAGGAGGTCGTGCAACTGGCCGCCAAGTCCGTGGGGGCGCGCTGTCTGTTGCGCCCACACCCGGTCGAGCGCATCG
TGCGGGATCTGACGCTCTATTTGCGCCAGCCCGCCCCAGATGCGGCCCTTGCCCAACTGGGTACCTACGTCATCGAACAA
AACGCTCCCATTCAGGCGCTGTGGCACGATGGGCGTCACTAG

Upstream 100 bases:

>100_bases
GCCAGTCCTGCAGTGCGGGGGCGGCAGACGGCTTTTTCGGCGCGGGCAAAATGGGTGGTTTTCTCCCCAGGGGCGGAGGA
CAGGCGGAGCGCTCTCCCCG

Downstream 100 bases:

>100_bases
CGCCGCCCTGGGCGAGACTCCCCTGCACCCGCCCGAGGCGGCCGCCGCCCTCGGTTCGACGCTGGTGGTCGCCCCGCACC
CGGACGACGAGTCGCTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Butyryl-CoA dehydrogenase; SCAD [H]

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MICHGDYHPLKRSKDITPPLLFNTAAVGREPLSVGEALTRAGQVADFCAANAARIDEDGAVPIEEFRRLAAAGLLAVPLD
ASLGGAGLGVSPGRTLALLSVLEQVGRGNLAVGRIYEGHVNALQLIQIFGSREQQSACAAAVHGGKIYNVWNTEDEDGTK
IVPLPGDRYRLEGAKTFASGTGLVERPIIGAARPDGGWQMVIVPMELYTGRVDPDWWQPLGMRASASFKVDFSGIELGED
ALLGVRGDYLRQPWLTAGVVRFAAVQLGGAAALLDCTREHLRNRGWQEHPYQRERMARAAIAVEGGRLWLQGAAERIDRW
LDNPAGPAGGEGLVAYANMVRTAVEAACQEVVQLAAKSVGARCLLRPHPVERIVRDLTLYLRQPAPDAALAQLGTYVIEQ
NAPIQALWHDGRH

Sequences:

>Translated_413_residues
MICHGDYHPLKRSKDITPPLLFNTAAVGREPLSVGEALTRAGQVADFCAANAARIDEDGAVPIEEFRRLAAAGLLAVPLD
ASLGGAGLGVSPGRTLALLSVLEQVGRGNLAVGRIYEGHVNALQLIQIFGSREQQSACAAAVHGGKIYNVWNTEDEDGTK
IVPLPGDRYRLEGAKTFASGTGLVERPIIGAARPDGGWQMVIVPMELYTGRVDPDWWQPLGMRASASFKVDFSGIELGED
ALLGVRGDYLRQPWLTAGVVRFAAVQLGGAAALLDCTREHLRNRGWQEHPYQRERMARAAIAVEGGRLWLQGAAERIDRW
LDNPAGPAGGEGLVAYANMVRTAVEAACQEVVQLAAKSVGARCLLRPHPVERIVRDLTLYLRQPAPDAALAQLGTYVIEQ
NAPIQALWHDGRH
>Mature_413_residues
MICHGDYHPLKRSKDITPPLLFNTAAVGREPLSVGEALTRAGQVADFCAANAARIDEDGAVPIEEFRRLAAAGLLAVPLD
ASLGGAGLGVSPGRTLALLSVLEQVGRGNLAVGRIYEGHVNALQLIQIFGSREQQSACAAAVHGGKIYNVWNTEDEDGTK
IVPLPGDRYRLEGAKTFASGTGLVERPIIGAARPDGGWQMVIVPMELYTGRVDPDWWQPLGMRASASFKVDFSGIELGED
ALLGVRGDYLRQPWLTAGVVRFAAVQLGGAAALLDCTREHLRNRGWQEHPYQRERMARAAIAVEGGRLWLQGAAERIDRW
LDNPAGPAGGEGLVAYANMVRTAVEAACQEVVQLAAKSVGARCLLRPHPVERIVRDLTLYLRQPAPDAALAQLGTYVIEQ
NAPIQALWHDGRH

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=348, Percent_Identity=26.1494252873563, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.2 [H]

Molecular weight: Translated: 44470; Mature: 44470

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICHGDYHPLKRSKDITPPLLFNTAAVGREPLSVGEALTRAGQVADFCAANAARIDEDGA
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCC
VPIEEFRRLAAAGLLAVPLDASLGGAGLGVSPGRTLALLSVLEQVGRGNLAVGRIYEGHV
CCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCH
NALQLIQIFGSREQQSACAAAVHGGKIYNVWNTEDEDGTKIVPLPGDRYRLEGAKTFASG
HHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCCEEECCCHHHHCC
TGLVERPIIGAARPDGGWQMVIVPMELYTGRVDPDWWQPLGMRASASFKVDFSGIELGED
CCCHHCCCCCCCCCCCCCEEEEEEHHHHCCCCCCHHHCCCCCCCCCEEEEEECCCEECCC
ALLGVRGDYLRQPWLTAGVVRFAAVQLGGAAALLDCTREHLRNRGWQEHPYQRERMARAA
CEECCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
IAVEGGRLWLQGAAERIDRWLDNPAGPAGGEGLVAYANMVRTAVEAACQEVVQLAAKSVG
EEECCCEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ARCLLRPHPVERIVRDLTLYLRQPAPDAALAQLGTYVIEQNAPIQALWHDGRH
CEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCC
>Mature Secondary Structure
MICHGDYHPLKRSKDITPPLLFNTAAVGREPLSVGEALTRAGQVADFCAANAARIDEDGA
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCC
VPIEEFRRLAAAGLLAVPLDASLGGAGLGVSPGRTLALLSVLEQVGRGNLAVGRIYEGHV
CCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCH
NALQLIQIFGSREQQSACAAAVHGGKIYNVWNTEDEDGTKIVPLPGDRYRLEGAKTFASG
HHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCCEEECCCHHHHCC
TGLVERPIIGAARPDGGWQMVIVPMELYTGRVDPDWWQPLGMRASASFKVDFSGIELGED
CCCHHCCCCCCCCCCCCCEEEEEEHHHHCCCCCCHHHCCCCCCCCCEEEEEECCCEECCC
ALLGVRGDYLRQPWLTAGVVRFAAVQLGGAAALLDCTREHLRNRGWQEHPYQRERMARAA
CEECCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
IAVEGGRLWLQGAAERIDRWLDNPAGPAGGEGLVAYANMVRTAVEAACQEVVQLAAKSVG
EEECCCEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ARCLLRPHPVERIVRDLTLYLRQPAPDAALAQLGTYVIEQNAPIQALWHDGRH
CEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8655474; 11466286 [H]