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The map label for this gene is petA

Identifier: 37522608

GI number: 37522608

Start: 3233642

End: 3234670

Strand: Direct

Name: petA

Synonym: gvip417

Alternate gene names: 37522608

Gene position: 3233642-3234670 (Clockwise)

Preceding gene: 37522607

Following gene: 37522610

Centisome position: 69.41

GC content: 61.52

Gene sequence:

>1029_bases
ATGAAAAAGCAATGGATAGCCGGTGCCTTCGGCTTGACGGCGGCGCTGGCAGGACTGGTGAGCGTGCCGCAGAGCGCCTT
GGCCTGGCCGAGTTTTGCCGCAGGCTACGAGGAAGCGCGCGAGTCCTCGGGCAAGATCGTCTGCGCCAACTGCCACCTGG
CGGTCAAGCCGACCGAAATTGAAGTGCCGCAGTCGGTGCTGCCCGGCAAGGTTTTCGACTTGAAAATCCACGTCCCCTAC
GACACCAAAATCCAGCAGGTGGGGGCGGACGGCAGCCCGGCGCCGATGCAGATCGGCGCCTACATTCAGTTGCCGGAAGG
TTTTACTGTCGCCGACGAGAAAGAGTGGAGCGCCGAGGCCAAAGAGTCGATCGAGAAGTACGGCGGGGTGACTCCTCTCT
ATGCCGACAAGCCCGAGCGCTCGAATATTTTGATCATCAATCAGATAGACGGCTCGACGGTGCCGGGGCAGGAATTTATC
GTGCCGGTCAAACCCCCCGACCCGAACGCCAAAGACGCCAAGGTCAACTTCGGCAAGTACGGCGTCTATGTGGGCGCCAA
CCGCGGTCGTGGCCAGGTTTACTCCAACGGTGTGGCGAGCAACACCGCCCAGTACAACGCCCCGGTGGCAGGCACGATTA
GCGCCGTCCAGACGGGGGTCACCTTTACCGACAAGCTGCAGTACGGTCTGGGCACCGAGGCTACCGACTTCGAGTACACA
AACGGCACCCGGGTGACGATCACCGACGAGAAGGGCAAGGCGAGCATCGTCAATATCCCTCCCGGCCCCAAACTGCTCGA
CACCGTCAAGCAGGGCGCCCAGATCAAGGCGGGCCAGCCGCTGACCAACGACCCGAACGTCGGCGGTTACGGCCAGGAGG
AGCGCGACATCGTTCTGCAAGATCCGCAGCGGGTGACCTGGCTGGTGGCTTTTCTGGCGGCAGCCTTCATCTGCCAGTTG
CTGCTGGTGCTCAAGAAAAAGCAGGTCGAAAAAGTGCAGGAGTTCGAGGCGCAGAAGCAGGGTCTTTAA

Upstream 100 bases:

>100_bases
CTGATTGCACCCTGGACCGAGCAGGACTTCCGCTGCACCGACTTGTGGTGCAACAAGGATCCGTACTGGGTGAAGTAAGC
AACGCAGAGGGTATCGAAGC

Downstream 100 bases:

>100_bases
GCGCAATCCATTGCGACTTCAGGGGCCGGGGAATGCTCCCCGGCCCCTTTTTTATTGCTGGCCCCCTTGGGAAGCGAGTT
GTTTTTCTTTGTCCAGGCGT

Product: apocytochrome f

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MKKQWIAGAFGLTAALAGLVSVPQSALAWPSFAAGYEEARESSGKIVCANCHLAVKPTEIEVPQSVLPGKVFDLKIHVPY
DTKIQQVGADGSPAPMQIGAYIQLPEGFTVADEKEWSAEAKESIEKYGGVTPLYADKPERSNILIINQIDGSTVPGQEFI
VPVKPPDPNAKDAKVNFGKYGVYVGANRGRGQVYSNGVASNTAQYNAPVAGTISAVQTGVTFTDKLQYGLGTEATDFEYT
NGTRVTITDEKGKASIVNIPPGPKLLDTVKQGAQIKAGQPLTNDPNVGGYGQEERDIVLQDPQRVTWLVAFLAAAFICQL
LLVLKKKQVEKVQEFEAQKQGL

Sequences:

>Translated_342_residues
MKKQWIAGAFGLTAALAGLVSVPQSALAWPSFAAGYEEARESSGKIVCANCHLAVKPTEIEVPQSVLPGKVFDLKIHVPY
DTKIQQVGADGSPAPMQIGAYIQLPEGFTVADEKEWSAEAKESIEKYGGVTPLYADKPERSNILIINQIDGSTVPGQEFI
VPVKPPDPNAKDAKVNFGKYGVYVGANRGRGQVYSNGVASNTAQYNAPVAGTISAVQTGVTFTDKLQYGLGTEATDFEYT
NGTRVTITDEKGKASIVNIPPGPKLLDTVKQGAQIKAGQPLTNDPNVGGYGQEERDIVLQDPQRVTWLVAFLAAAFICQL
LLVLKKKQVEKVQEFEAQKQGL
>Mature_342_residues
MKKQWIAGAFGLTAALAGLVSVPQSALAWPSFAAGYEEARESSGKIVCANCHLAVKPTEIEVPQSVLPGKVFDLKIHVPY
DTKIQQVGADGSPAPMQIGAYIQLPEGFTVADEKEWSAEAKESIEKYGGVTPLYADKPERSNILIINQIDGSTVPGQEFI
VPVKPPDPNAKDAKVNFGKYGVYVGANRGRGQVYSNGVASNTAQYNAPVAGTISAVQTGVTFTDKLQYGLGTEATDFEYT
NGTRVTITDEKGKASIVNIPPGPKLLDTVKQGAQIKAGQPLTNDPNVGGYGQEERDIVLQDPQRVTWLVAFLAAAFICQL
LLVLKKKQVEKVQEFEAQKQGL

Specific function: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome f family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CYF_GLOVI (Q7NCE0)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_925985.1
- HSSP:   P23577
- ProteinModelPortal:   Q7NCE0
- SMR:   Q7NCE0
- GeneID:   2601440
- GenomeReviews:   BA000045_GR
- NMPDR:   fig|251221.1.peg.3039
- HOGENOM:   HBG750208
- OMA:   AYPFWAQ
- ProtClustDB:   PRK02693
- BioCyc:   GVIO251221:GLR3039-MONOMER
- GO:   GO:0015979
- GO:   GO:0006810
- HAMAP:   MF_00610
- InterPro:   IPR002325
- InterPro:   IPR011054
- Gene3D:   G3DSA:2.60.40.830
- PRINTS:   PR00610

Pfam domain/function: PF01333 Apocytochr_F_C; SSF49441 Apocyt_F; SSF51246 Rudmnt_hyb_motif

EC number: NA

Molecular weight: Translated: 36650; Mature: 36650

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS51010 CYTF

Important sites: BINDING 48-48 BINDING 51-51

Signals:

None

Transmembrane regions:

HASH(0x15c969e4)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQWIAGAFGLTAALAGLVSVPQSALAWPSFAAGYEEARESSGKIVCANCHLAVKPTEI
CCCCEECHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCCEEEEECEEEECCCCC
EVPQSVLPGKVFDLKIHVPYDTKIQQVGADGSPAPMQIGAYIQLPEGFTVADEKEWSAEA
CCCHHHCCCEEEEEEEECCCCCHHHHCCCCCCCCCEEEEEEEECCCCCEECCCCHHHHHH
KESIEKYGGVTPLYADKPERSNILIINQIDGSTVPGQEFIVPVKPPDPNAKDAKVNFGKY
HHHHHHHCCCCCEECCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEECCEE
GVYVGANRGRGQVYSNGVASNTAQYNAPVAGTISAVQTGVTFTDKLQYGLGTEATDFEYT
EEEEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHCCCEEEEHHHCCCCCCCCCEEEC
NGTRVTITDEKGKASIVNIPPGPKLLDTVKQGAQIKAGQPLTNDPNVGGYGQEERDIVLQ
CCCEEEEECCCCCEEEEECCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEEE
DPQRVTWLVAFLAAAFICQLLLVLKKKQVEKVQEFEAQKQGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MKKQWIAGAFGLTAALAGLVSVPQSALAWPSFAAGYEEARESSGKIVCANCHLAVKPTEI
CCCCEECHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCCEEEEECEEEECCCCC
EVPQSVLPGKVFDLKIHVPYDTKIQQVGADGSPAPMQIGAYIQLPEGFTVADEKEWSAEA
CCCHHHCCCEEEEEEEECCCCCHHHHCCCCCCCCCEEEEEEEECCCCCEECCCCHHHHHH
KESIEKYGGVTPLYADKPERSNILIINQIDGSTVPGQEFIVPVKPPDPNAKDAKVNFGKY
HHHHHHHCCCCCEECCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEECCEE
GVYVGANRGRGQVYSNGVASNTAQYNAPVAGTISAVQTGVTFTDKLQYGLGTEATDFEYT
EEEEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHCCCEEEEHHHCCCCCCCCCEEEC
NGTRVTITDEKGKASIVNIPPGPKLLDTVKQGAQIKAGQPLTNDPNVGGYGQEERDIVLQ
CCCEEEEECCCCCEEEEECCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEEE
DPQRVTWLVAFLAAAFICQLLLVLKKKQVEKVQEFEAQKQGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292