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The map label for this gene is nifU [H]

Identifier: 37522446

GI number: 37522446

Start: 3071035

End: 3071292

Strand: Reverse

Name: nifU [H]

Synonym: gsl2877

Alternate gene names: 37522446

Gene position: 3071292-3071035 (Counterclockwise)

Preceding gene: 37522449

Following gene: 37522444

Centisome position: 65.92

GC content: 58.14

Gene sequence:

>258_bases
ATGAGAGAAACCTTTGAAGACGAGGTTCTCGAACTGAATCGGGATAACGTCGAGCTGGTCCTCGACGAATTGCGCCCCTA
TTTGATGTCCGACGGCGGCAACGTCGAACTCGTCGAAATCGAAGGGCCGATCGTCAAACTGCGCCTGCAGGGCGCCTGCG
GCTCCTGCCCCAGTTCGACCTATACCCTGAAGCTCGGTATCGAGCGGCGCATGCGCGAACTCATTCCGGCCGTTGCCGAG
GTCGAACAGGTTCTCTAA

Upstream 100 bases:

>100_bases
CGCTCCGACAATCAAGACATCGTGCATGCCCTCCAGCCTAACGCGCCGGGGCAACGGGCAGGTGGCGTTAAGATGAAGGC
ACAAAGCTGGAGAAGTTGCG

Downstream 100 bases:

>100_bases
GGCATATCCTAAAATCAAAAAGCCCCCGCTTGCGGGGGCTTTTTGTCGGCAACAGGAATCCCTCCTAGCGGCCGCAGGCA
GCGTTGTTCTGCATATGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MRETFEDEVLELNRDNVELVLDELRPYLMSDGGNVELVEIEGPIVKLRLQGACGSCPSSTYTLKLGIERRMRELIPAVAE
VEQVL

Sequences:

>Translated_85_residues
MRETFEDEVLELNRDNVELVLDELRPYLMSDGGNVELVEIEGPIVKLRLQGACGSCPSSTYTLKLGIERRMRELIPAVAE
VEQVL
>Mature_85_residues
MRETFEDEVLELNRDNVELVLDELRPYLMSDGGNVELVEIEGPIVKLRLQGACGSCPSSTYTLKLGIERRMRELIPAVAE
VEQVL

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI50593021, Length=80, Percent_Identity=45, Blast_Score=64, Evalue=3e-11,
Organism=Homo sapiens, GI50593025, Length=80, Percent_Identity=45, Blast_Score=64, Evalue=3e-11,
Organism=Homo sapiens, GI50593023, Length=80, Percent_Identity=45, Blast_Score=64, Evalue=3e-11,
Organism=Homo sapiens, GI50593019, Length=80, Percent_Identity=45, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45551492, Length=84, Percent_Identity=41.6666666666667, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24643765, Length=84, Percent_Identity=41.6666666666667, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45556188, Length=84, Percent_Identity=41.6666666666667, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001075
- ProDom:   PD002830 [H]

Pfam domain/function: PF01106 NifU [H]

EC number: NA

Molecular weight: Translated: 9590; Mature: 9590

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRETFEDEVLELNRDNVELVLDELRPYLMSDGGNVELVEIEGPIVKLRLQGACGSCPSST
CCCCCCCHHHHCCCCCHHHHHHHHHHHEECCCCCEEEEEECCCEEEEEECCCCCCCCCCE
YTLKLGIERRMRELIPAVAEVEQVL
EEEEECHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRETFEDEVLELNRDNVELVLDELRPYLMSDGGNVELVEIEGPIVKLRLQGACGSCPSST
CCCCCCCHHHHCCCCCHHHHHHHHHHHEECCCCCEEEEEECCCEEEEEECCCCCCCCCCE
YTLKLGIERRMRELIPAVAEVEQVL
EEEEECHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8424961 [H]