| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is cysR [H]
Identifier: 37522368
GI number: 37522368
Start: 2977341
End: 2977976
Strand: Direct
Name: cysR [H]
Synonym: glr2799
Alternate gene names: 37522368
Gene position: 2977341-2977976 (Clockwise)
Preceding gene: 37522367
Following gene: 37522369
Centisome position: 63.9
GC content: 61.95
Gene sequence:
>636_bases ATGTCGAACCGGGACGCACAACAGGATTTCCGCCTGCTGCTCGAGGAACTGTACCGGGAGAGAACCCTGCGCTTTTTTAA GGCCGGACAGAGCATCCCCTTGCGCAACCAGGAAATCTGGATTGTCTACCGGGGATTGGTACAACTGGCGACGCTGCAAC CGAGCGGCGACGAGGCGCTGTTGGGACTGGCGGGTTCGCTGATGCCGTTGGGCCGTTCGCTGACGCTGCTGGAGCCTTAT CATGCCGTGGCGCTCACCAACGTCGATTTGCTCAGGCTGACCACCGAGGAGATCCACTCCAGCCCACGGCTGGCGCGCGA ATTGACCGAACAGATGGCCCGCCGCCTGCGCCAGGCGGAAGCCCTGCTGGCGCTGGCGGGCAAGCGCCTGGTGATCGATC GGCTCCAGGGCTTTTTGTACCTGCTTGCCCACGAATTCGGTCATCCCACCGGCGAAGGTATCCGCATCGATGTGCGCCTC ACCCACCAGCAATTTGCCAACGCCCTGGGGACTACACGGGTGACGGTGACCCGCTTTTTGGGCGAACTCAAATACCGCGG TCTCATCGAAATAGGCGCCGACCGCCGCATCTATCTCAAGGAACCCCAGCGGCTGGCGGCGGCCAGTTGTTTTTAA
Upstream 100 bases:
>100_bases GCAAAGCGGATCTTGCGCACCGAAATCCGGTGTTCTTCATTACCTGACCTTTACCTGGGCGGTTTAGGGTAAGGTCACTC GTTATCTGGACTACTTTTTT
Downstream 100 bases:
>100_bases GTTTTGCGTGGCCACGAGCCGATCGAACTGGTAGACTGGCGGCAGAACAGTAACTTTCTGTAAGGTTTGGCGTCGCGAGA TCGGCCTCGCCGGGATTTGC
Product: CRP family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSNRDAQQDFRLLLEELYRERTLRFFKAGQSIPLRNQEIWIVYRGLVQLATLQPSGDEALLGLAGSLMPLGRSLTLLEPY HAVALTNVDLLRLTTEEIHSSPRLARELTEQMARRLRQAEALLALAGKRLVIDRLQGFLYLLAHEFGHPTGEGIRIDVRL THQQFANALGTTRVTVTRFLGELKYRGLIEIGADRRIYLKEPQRLAAASCF
Sequences:
>Translated_211_residues MSNRDAQQDFRLLLEELYRERTLRFFKAGQSIPLRNQEIWIVYRGLVQLATLQPSGDEALLGLAGSLMPLGRSLTLLEPY HAVALTNVDLLRLTTEEIHSSPRLARELTEQMARRLRQAEALLALAGKRLVIDRLQGFLYLLAHEFGHPTGEGIRIDVRL THQQFANALGTTRVTVTRFLGELKYRGLIEIGADRRIYLKEPQRLAAASCF >Mature_210_residues SNRDAQQDFRLLLEELYRERTLRFFKAGQSIPLRNQEIWIVYRGLVQLATLQPSGDEALLGLAGSLMPLGRSLTLLEPYH AVALTNVDLLRLTTEEIHSSPRLARELTEQMARRLRQAEALLALAGKRLVIDRLQGFLYLLAHEFGHPTGEGIRIDVRLT HQQFANALGTTRVTVTRFLGELKYRGLIEIGADRRIYLKEPQRLAAASCF
Specific function: Probably regulates the expression of genes from the sulfate permease complex [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH crp-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018490 - InterPro: IPR001808 - InterPro: IPR012318 - InterPro: IPR014710 - InterPro: IPR018335 - InterPro: IPR011991 [H]
Pfam domain/function: PF00325 Crp [H]
EC number: NA
Molecular weight: Translated: 23976; Mature: 23845
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRDAQQDFRLLLEELYRERTLRFFKAGQSIPLRNQEIWIVYRGLVQLATLQPSGDEAL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCHHH LGLAGSLMPLGRSLTLLEPYHAVALTNVDLLRLTTEEIHSSPRLARELTEQMARRLRQAE HHHHHHHHHCCCCEEEECCHHHHHHCCCHHHEEEHHHHHCCHHHHHHHHHHHHHHHHHHH ALLALAGKRLVIDRLQGFLYLLAHEFGHPTGEGIRIDVRLTHQQFANALGTTRVTVTRFL HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHCCHHHHHHHHH GELKYRGLIEIGADRRIYLKEPQRLAAASCF HHHHHCCEEEECCCCEEEECCCHHHHHHCCC >Mature Secondary Structure SNRDAQQDFRLLLEELYRERTLRFFKAGQSIPLRNQEIWIVYRGLVQLATLQPSGDEAL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCHHH LGLAGSLMPLGRSLTLLEPYHAVALTNVDLLRLTTEEIHSSPRLARELTEQMARRLRQAE HHHHHHHHHCCCCEEEECCHHHHHHCCCHHHEEEHHHHHCCHHHHHHHHHHHHHHHHHHH ALLALAGKRLVIDRLQGFLYLLAHEFGHPTGEGIRIDVRLTHQQFANALGTTRVTVTRFL HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHCCHHHHHHHHH GELKYRGLIEIGADRRIYLKEPQRLAAASCF HHHHHCCEEEECCCCEEEECCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]