| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is 37522338
Identifier: 37522338
GI number: 37522338
Start: 2948409
End: 2948798
Strand: Direct
Name: 37522338
Synonym: glr2769
Alternate gene names: NA
Gene position: 2948409-2948798 (Clockwise)
Preceding gene: 37522332
Following gene: 37522341
Centisome position: 63.28
GC content: 65.64
Gene sequence:
>390_bases ATGGGTTCAAACGATCAGTACCCAGAGGAAGCCCCCGCCCACCCGGTCCGCGTCAATGGTTTCTGGATGGACCGCTTTGT GGTCACCAACTCGCAGTTTCGCCGCTTCGTCAAGGCCACCGGCTATCGCACCCTGGCCGAGCGTCCAGCGGACGCGGCCA CTTATCCGGGCGCGTTGCCCGAACTGCTGCAACCCGCCTCGGCCGTCTTTGTCAAACCTCCCGGGCCGGTGGACAAAGGC GACCACCGCCACTGGTGGATTTATACCGTGGGCGCCAACTGGCGCCACCCCGAAGGGCCCCACAGTTCGATCAAAGGCCG CGAGCAGCACCCGGTGGTTCGTCAACGGCGAGGACCAGGCTGTGCGCCGAGCCGGGCTCGGCCGATATGA
Upstream 100 bases:
>100_bases CCGAGCCACCAATTCGCTCCGTACTGCAGCTGCTCAAAGCCGCCCACCGGGTCGACCCCCGGCCCGGGACACAGTCTGAA TTCCCGGAGGAACGTTCTGG
Downstream 100 bases:
>100_bases CTCCCTTGCCGAAGATGATCGAGGCTTCCGAGTTGTGCGGCGTCATCTGCACGCCACGGAAGTCGTCGCCCTCTGCGACG TCGATGTCGAGCCGCCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MGSNDQYPEEAPAHPVRVNGFWMDRFVVTNSQFRRFVKATGYRTLAERPADAATYPGALPELLQPASAVFVKPPGPVDKG DHRHWWIYTVGANWRHPEGPHSSIKGREQHPVVRQRRGPGCAPSRARPI
Sequences:
>Translated_129_residues MGSNDQYPEEAPAHPVRVNGFWMDRFVVTNSQFRRFVKATGYRTLAERPADAATYPGALPELLQPASAVFVKPPGPVDKG DHRHWWIYTVGANWRHPEGPHSSIKGREQHPVVRQRRGPGCAPSRARPI >Mature_128_residues GSNDQYPEEAPAHPVRVNGFWMDRFVVTNSQFRRFVKATGYRTLAERPADAATYPGALPELLQPASAVFVKPPGPVDKGD HRHWWIYTVGANWRHPEGPHSSIKGREQHPVVRQRRGPGCAPSRARPI
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI38202250, Length=118, Percent_Identity=39.8305084745763, Blast_Score=84, Evalue=3e-17, Organism=Homo sapiens, GI257470977, Length=118, Percent_Identity=39.8305084745763, Blast_Score=84, Evalue=4e-17, Organism=Drosophila melanogaster, GI20130397, Length=104, Percent_Identity=36.5384615384615, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14502; Mature: 14371
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSNDQYPEEAPAHPVRVNGFWMDRFVVTNSQFRRFVKATGYRTLAERPADAATYPGALP CCCCCCCCCCCCCCCEEECCEEEEEEEEECHHHHHHHHHCCCHHHHCCCCCCCCCCCCCH ELLQPASAVFVKPPGPVDKGDHRHWWIYTVGANWRHPEGPHSSIKGREQHPVVRQRRGPG HHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC CAPSRARPI CCCCCCCCC >Mature Secondary Structure GSNDQYPEEAPAHPVRVNGFWMDRFVVTNSQFRRFVKATGYRTLAERPADAATYPGALP CCCCCCCCCCCCCCEEECCEEEEEEEEECHHHHHHHHHCCCHHHHCCCCCCCCCCCCCH ELLQPASAVFVKPPGPVDKGDHRHWWIYTVGANWRHPEGPHSSIKGREQHPVVRQRRGPG HHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC CAPSRARPI CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA