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The map label for this gene is insF1 [C]

Identifier: 37522244

GI number: 37522244

Start: 2837836

End: 2838675

Strand: Reverse

Name: insF1 [C]

Synonym: gll2675

Alternate gene names: 37522244

Gene position: 2838675-2837836 (Counterclockwise)

Preceding gene: 37522245

Following gene: 37522243

Centisome position: 60.93

GC content: 50.0

Gene sequence:

>840_bases
GTGGCTTCCTTGTGTGACCTGGTCGGGTTGCCCCGCAGTAGCTTTTATCGCCAGTCGGTCTTTAAGGTTTTGGAAGACCA
GGAATGCGAGACGGAGTTACGTCATCAGATGCAGTTGATATGTTTAGAGATGCCTGGCTATAGTTATCGTCGAATTACAG
CCGAATTGCACCGCCGGGGTTGGCCGGTTAATCACAAACGGGTGTTGCGCTTGATGCGGCAAGACAACCTACTGTGCCTG
AGGCGCAAAGCTTTCGTGCGAACGACCGACTCGGAGCACGGATTTCGGGTGTATCCGAACCTGGCGACAAACCTGATGCC
GAGCGGTCTCAATCAACTGTGGATATCGGATATTACTTACATTCGTTTGCAAGAAGAGTTTGTGTATTTGGCGATTATTT
TAGACCGCTACAGCCGCCGGGTAATCGGCTGGTCTCTAAGTCGTCATATTGACATGGAGTTGAGTCTAAGTGCTCTGCGG
ATGGCGCTATCGAATCGGGAAGTGTTACCTGGGCTGATTCACCATTCGGACCGAGGAGTGCAGTATGCATCGAAGGCGTA
CATCGAACTGTTGGAGGAGCACAAAATCGCGATTAGCATGAGTCGTCGTGGCAATCCTTATGACAATGCATTTGCGGAGT
CGTTCATGAAAACTCTGAAGTACGAGGAAGTGTTGTTGAACGAGTACGGAGATTACCGAGAAGCTCAAGGGAACATTGCC
AGGTTTATCGAGGAGGTTTATAATCGCAAGCGGTTGCACTCGTCGATAGGCTATCTACCGCCAGTAGAATTTGAAGCCAG
AGTCGAGCATGAGATAAGTCCAGCAAGCCATCCCACTTAA

Upstream 100 bases:

>100_bases
TTTTAAAAAAGGTCTTGGAGCGCTTAGAACGGCATGCGAAGGAACGCAATACTCCACATTGATCTACCGGGTTATTGCCG
AACATTCTGGAGAATATTCT

Downstream 100 bases:

>100_bases
GAATGTGAGAAAACTGTCTCAGATCTGGGGTTCACTCCAGTGACTACATCATCCACTACGCCCACTGCCCGGTATTGGTT
GTTCGCTGACAAAGCTCGTA

Product: putative transposase

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MASLCDLVGLPRSSFYRQSVFKVLEDQECETELRHQMQLICLEMPGYSYRRITAELHRRGWPVNHKRVLRLMRQDNLLCL
RRKAFVRTTDSEHGFRVYPNLATNLMPSGLNQLWISDITYIRLQEEFVYLAIILDRYSRRVIGWSLSRHIDMELSLSALR
MALSNREVLPGLIHHSDRGVQYASKAYIELLEEHKIAISMSRRGNPYDNAFAESFMKTLKYEEVLLNEYGDYREAQGNIA
RFIEEVYNRKRLHSSIGYLPPVEFEARVEHEISPASHPT

Sequences:

>Translated_279_residues
MASLCDLVGLPRSSFYRQSVFKVLEDQECETELRHQMQLICLEMPGYSYRRITAELHRRGWPVNHKRVLRLMRQDNLLCL
RRKAFVRTTDSEHGFRVYPNLATNLMPSGLNQLWISDITYIRLQEEFVYLAIILDRYSRRVIGWSLSRHIDMELSLSALR
MALSNREVLPGLIHHSDRGVQYASKAYIELLEEHKIAISMSRRGNPYDNAFAESFMKTLKYEEVLLNEYGDYREAQGNIA
RFIEEVYNRKRLHSSIGYLPPVEFEARVEHEISPASHPT
>Mature_278_residues
ASLCDLVGLPRSSFYRQSVFKVLEDQECETELRHQMQLICLEMPGYSYRRITAELHRRGWPVNHKRVLRLMRQDNLLCLR
RKAFVRTTDSEHGFRVYPNLATNLMPSGLNQLWISDITYIRLQEEFVYLAIILDRYSRRVIGWSLSRHIDMELSLSALRM
ALSNREVLPGLIHHSDRGVQYASKAYIELLEEHKIAISMSRRGNPYDNAFAESFMKTLKYEEVLLNEYGDYREAQGNIAR
FIEEVYNRKRLHSSIGYLPPVEFEARVEHEISPASHPT

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=229, Percent_Identity=30.5676855895196, Blast_Score=114, Evalue=1e-25,
Organism=Escherichia coli, GI1788405, Length=220, Percent_Identity=39.0909090909091, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1787263, Length=220, Percent_Identity=39.0909090909091, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1786753, Length=220, Percent_Identity=39.0909090909091, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1786570, Length=220, Percent_Identity=39.0909090909091, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1786490, Length=220, Percent_Identity=39.0909090909091, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1789981, Length=257, Percent_Identity=33.0739299610895, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1790724, Length=251, Percent_Identity=28.2868525896414, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1789424, Length=251, Percent_Identity=28.2868525896414, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1789224, Length=251, Percent_Identity=28.2868525896414, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1788305, Length=251, Percent_Identity=28.2868525896414, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1787669, Length=251, Percent_Identity=28.2868525896414, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1786558, Length=251, Percent_Identity=28.2868525896414, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 32753; Mature: 32622

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLCDLVGLPRSSFYRQSVFKVLEDQECETELRHQMQLICLEMPGYSYRRITAELHRRG
CCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCC
WPVNHKRVLRLMRQDNLLCLRRKAFVRTTDSEHGFRVYPNLATNLMPSGLNQLWISDITY
CCCCHHHHHHHHHHCCHHHHHHHHHHEECCCCCCEEECCCHHHHCCCCCHHHHHHHHHHE
IRLQEEFVYLAIILDRYSRRVIGWSLSRHIDMELSLSALRMALSNREVLPGLIHHSDRGV
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCH
QYASKAYIELLEEHKIAISMSRRGNPYDNAFAESFMKTLKYEEVLLNEYGDYREAQGNIA
HHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHH
RFIEEVYNRKRLHSSIGYLPPVEFEARVEHEISPASHPT
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ASLCDLVGLPRSSFYRQSVFKVLEDQECETELRHQMQLICLEMPGYSYRRITAELHRRG
CCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCC
WPVNHKRVLRLMRQDNLLCLRRKAFVRTTDSEHGFRVYPNLATNLMPSGLNQLWISDITY
CCCCHHHHHHHHHHCCHHHHHHHHHHEECCCCCCEEECCCHHHHCCCCCHHHHHHHHHHE
IRLQEEFVYLAIILDRYSRRVIGWSLSRHIDMELSLSALRMALSNREVLPGLIHHSDRGV
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCH
QYASKAYIELLEEHKIAISMSRRGNPYDNAFAESFMKTLKYEEVLLNEYGDYREAQGNIA
HHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHH
RFIEEVYNRKRLHSSIGYLPPVEFEARVEHEISPASHPT
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]