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The map label for this gene is rca [H]

Identifier: 37522136

GI number: 37522136

Start: 2718421

End: 2719305

Strand: Reverse

Name: rca [H]

Synonym: gvip352

Alternate gene names: 37522136

Gene position: 2719305-2718421 (Counterclockwise)

Preceding gene: 37522137

Following gene: 37522134

Centisome position: 58.37

GC content: 63.62

Gene sequence:

>885_bases
ATGGCCGGCTATTTCATCCCGGATCGTTTTCGCGACCGGATTATTTTGCACATCGCCAAAAACTACGCGGCGCTGCCGAA
GGTGCAGACGCCTTTGATATTGGGCATCCACGGCCCGAAGGGCGAGGGCAAGTCCTTCATGGTCGACCGGGTGCTGCAGG
AGTTGCAGGCGAACGTGATCGTCATCTCCTCCTCGGAGCTTGAAAGCCCGGATGCGGGGGAACCGGGGCGGCTCATCCGC
CTGCGCTACCGGGAGGCGGCGGAATTGGTGAAGGTGCGCGGGCGGGTGGCGGCCATCGTCATCCACGACATCGACGCGGG
CGCGGGTTTCTGGAGCGCGACCACCCAGTACACGGTCAATACCCAACTGGTCAACGCCGCTTTGATGGCGATCGCCGACA
ACCCGACCAACGTGCAACTGCCGGGCAGTTACGACCCGACGCCGCTGCCGCGCATCCCGTTTGTGGTTACGGGCAACGAT
TTTTCGAAGCTCTACGCACCGCTGGTGCGCGACGGGCGGATGAGCAAATTCTCGTGGGAACCCACCTTCGCCGAAAAGTC
CGAGATCGTGGCACACCTGTTTGCCGAGGACGGCGCCGCCCTCGGCCGCTACGACCTGGAGCGGCTGATTCAGCGCTTCG
GCGCTCAGCCGGTCGATTTTTTTGCCGCCATCCGCTCGCGCGCCTACGACGACATGCTGCTCCAGCAGGTCAAAGCCTGG
GGACTGGAGAACGTCAGCCGCAATCTGGTCAACCATGGCGGTCAGCCGCCCCGCTTCGAGGCGGTCCGCCTCGATCTCGA
TCGCTGCTTGCGCTGGGGTGAGCAGATCATGAGCGACCAGCAGGCGATCGAGAGCGGATTGGTCGAAGCGTATACGCGCC
GCTAG

Upstream 100 bases:

>100_bases
CAACGCTCGCCTGCGCGCCGCGGGCGCCCTCTAAGCCCAGCCAAATTGCAGCATTTGCTACCGCCTATAATGCGGGGAAG
GCATTCGCGGGGGCAGGGCC

Downstream 100 bases:

>100_bases
CGGCTGCCGTTGGTGGGCAGGTCGAGATCGAGCACCAGGCTGTCGTCGGCCAGGTAATGGGCCAGGTGGAAGGCCCGCTC
CTCGGTCTTGAGCAGTACTT

Product: ribulose-bisphosphate carboxylase activase

Products: NA

Alternate protein names: RA; RuBisCO activase [H]

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MAGYFIPDRFRDRIILHIAKNYAALPKVQTPLILGIHGPKGEGKSFMVDRVLQELQANVIVISSSELESPDAGEPGRLIR
LRYREAAELVKVRGRVAAIVIHDIDAGAGFWSATTQYTVNTQLVNAALMAIADNPTNVQLPGSYDPTPLPRIPFVVTGND
FSKLYAPLVRDGRMSKFSWEPTFAEKSEIVAHLFAEDGAALGRYDLERLIQRFGAQPVDFFAAIRSRAYDDMLLQQVKAW
GLENVSRNLVNHGGQPPRFEAVRLDLDRCLRWGEQIMSDQQAIESGLVEAYTRR

Sequences:

>Translated_294_residues
MAGYFIPDRFRDRIILHIAKNYAALPKVQTPLILGIHGPKGEGKSFMVDRVLQELQANVIVISSSELESPDAGEPGRLIR
LRYREAAELVKVRGRVAAIVIHDIDAGAGFWSATTQYTVNTQLVNAALMAIADNPTNVQLPGSYDPTPLPRIPFVVTGND
FSKLYAPLVRDGRMSKFSWEPTFAEKSEIVAHLFAEDGAALGRYDLERLIQRFGAQPVDFFAAIRSRAYDDMLLQQVKAW
GLENVSRNLVNHGGQPPRFEAVRLDLDRCLRWGEQIMSDQQAIESGLVEAYTRR
>Mature_293_residues
AGYFIPDRFRDRIILHIAKNYAALPKVQTPLILGIHGPKGEGKSFMVDRVLQELQANVIVISSSELESPDAGEPGRLIRL
RYREAAELVKVRGRVAAIVIHDIDAGAGFWSATTQYTVNTQLVNAALMAIADNPTNVQLPGSYDPTPLPRIPFVVTGNDF
SKLYAPLVRDGRMSKFSWEPTFAEKSEIVAHLFAEDGAALGRYDLERLIQRFGAQPVDFFAAIRSRAYDDMLLQQVKAWG
LENVSRNLVNHGGQPPRFEAVRLDLDRCLRWGEQIMSDQQAIESGLVEAYTRR

Specific function: Activation of RuBisCO (ribulose-1,5-bisohosphate carboxylase/oxygenase; EC 4.1.1.39) involves the ATP-dependent carboxylation of the epsilon-amino group of lysine leading to a carbamate structure [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO activase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003959
- InterPro:   IPR000894 [H]

Pfam domain/function: PF00004 AAA; PF00101 RuBisCO_small [H]

EC number: NA

Molecular weight: Translated: 32850; Mature: 32719

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGYFIPDRFRDRIILHIAKNYAALPKVQTPLILGIHGPKGEGKSFMVDRVLQELQANVI
CCCCCCCHHHHHHEEEEEHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEE
VISSSELESPDAGEPGRLIRLRYREAAELVKVRGRVAAIVIHDIDAGAGFWSATTQYTVN
EEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEEH
TQLVNAALMAIADNPTNVQLPGSYDPTPLPRIPFVVTGNDFSKLYAPLVRDGRMSKFSWE
HHHHHHHHHHEECCCCEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCEECC
PTFAEKSEIVAHLFAEDGAALGRYDLERLIQRFGAQPVDFFAAIRSRAYDDMLLQQVKAW
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLENVSRNLVNHGGQPPRFEAVRLDLDRCLRWGEQIMSDQQAIESGLVEAYTRR
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGYFIPDRFRDRIILHIAKNYAALPKVQTPLILGIHGPKGEGKSFMVDRVLQELQANVI
CCCCCCHHHHHHEEEEEHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEE
VISSSELESPDAGEPGRLIRLRYREAAELVKVRGRVAAIVIHDIDAGAGFWSATTQYTVN
EEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEEH
TQLVNAALMAIADNPTNVQLPGSYDPTPLPRIPFVVTGNDFSKLYAPLVRDGRMSKFSWE
HHHHHHHHHHEECCCCEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCEECC
PTFAEKSEIVAHLFAEDGAALGRYDLERLIQRFGAQPVDFFAAIRSRAYDDMLLQQVKAW
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLENVSRNLVNHGGQPPRFEAVRLDLDRCLRWGEQIMSDQQAIESGLVEAYTRR
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8467074 [H]