| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37522112
Identifier: 37522112
GI number: 37522112
Start: 2697499
End: 2698665
Strand: Direct
Name: 37522112
Synonym: glr2543
Alternate gene names: NA
Gene position: 2697499-2698665 (Clockwise)
Preceding gene: 37522109
Following gene: 37522114
Centisome position: 57.9
GC content: 60.5
Gene sequence:
>1167_bases ATGACTCAAGCGCCGATTGGTCCTGCCTACCCGCTGCTGCAGAACCGCACCTGCAGCAATTGTGGTCTGTGCTTTCATGC CCAGTTCGAAGCGCACGTCGAGGAAATCTGCCCATTCGAGGACGATCGGGTGAGTGAGCGCGAAGTGCAGTTGCACGGCC GTAGCCGCCGGTTGTCGGGCGACGAGCTGTACTTTGGGGTGTTCCGCTCGATGCACGCTGCCCGATTAAGCACGCCCCGC CCCGATAGCCAGACCGGTGGTGCCGTGAGCACCCTCCTGGAGCGGTTGCTGGATAGCGGCAAAGTCGAGGCGGTACTCAC CACCCGCCGCAACCCCGACAACACCGGCACGCCGGTATTGGTGCGCCACGCGGCGGAACTGGCGCACACCGGCGGCTCGC GCTGGGATCTAGCTCCGATTCTGGATCTGGTGCCTGAGGTCAAAAGACAGGGTATCCGTCGGCTGGCGGTGGTCGGCGTC GGTTGCCAGGTGAGTGCTTTGCGGGCCATCGAAGCACAACTGGGCCTCGAAAAGCTTTATGTCGTCGGTCTGGTGTGCAC CGACAACATGACCTTCGCCAACTGGCAGCGCCTGATTAAAACCACCAGCCGCTCGCCGCGTACGGTCAAAAAGCTCGAAT TTATGGCCGATTTTCGCATCTGGTTCTGGCACGAGAACGGTGCGATCGAGAAGGTGAGCTACTTCGAGATGCCCATGGAC AAGCTTCGGGGTTGTTTTCCCCAGGCGTGCCTGTCCTGTTTCGATCAGACCAATGGCCTTGCGGATTTGAGCGTCGGGTA TATGGCCGCCGATATCGGCTGGCAGTGGTTTCTTGTGCGTAATGAGCAGGGAGAAGCGCTTTTCAACCTGCTGCGAGACG ACCTCGAAATGGGTCGGTTCACCGACCGCGGCAACCGCAGCGAGGCGATGAAACAGATTCTGCGCTACCTGGGCAAACCG GCCATCACGCTGCCGAGTTTGCTGGCGCAGCTATTCACCTGGCAAGTCGAGCACTTCGGGCCGCGCGGCCTCGAATTTGC CCGCCTCGCCGTCGAAAACAAGCAGACGCGCAACTGGTACTACCTGAAGACGCACCGCCCGGACAAGCTCAAAAAACTGA TCCCCCGCCACGTCCAGGCGATTCTTGATCAGTACAGGCTCAAGTGA
Upstream 100 bases:
>100_bases ACACCACGCCGGACACCCTCCCTCTGGCCCGTGCCGCCGACACGGCCTACCATGTAAGCTACCGATTTTTTGAATCCACC GCCCCGGGGGCTGTTTAGCA
Downstream 100 bases:
>100_bases GCTTTAGGACGGCGCCGCAATCGCAGTGTAATCGGGCGGAGGGAATCTCAATCACTGCTTTTGCAGAAGCTGAAGAATCT GCTGGTTTTCGCTTTGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTQAPIGPAYPLLQNRTCSNCGLCFHAQFEAHVEEICPFEDDRVSEREVQLHGRSRRLSGDELYFGVFRSMHAARLSTPR PDSQTGGAVSTLLERLLDSGKVEAVLTTRRNPDNTGTPVLVRHAAELAHTGGSRWDLAPILDLVPEVKRQGIRRLAVVGV GCQVSALRAIEAQLGLEKLYVVGLVCTDNMTFANWQRLIKTTSRSPRTVKKLEFMADFRIWFWHENGAIEKVSYFEMPMD KLRGCFPQACLSCFDQTNGLADLSVGYMAADIGWQWFLVRNEQGEALFNLLRDDLEMGRFTDRGNRSEAMKQILRYLGKP AITLPSLLAQLFTWQVEHFGPRGLEFARLAVENKQTRNWYYLKTHRPDKLKKLIPRHVQAILDQYRLK
Sequences:
>Translated_388_residues MTQAPIGPAYPLLQNRTCSNCGLCFHAQFEAHVEEICPFEDDRVSEREVQLHGRSRRLSGDELYFGVFRSMHAARLSTPR PDSQTGGAVSTLLERLLDSGKVEAVLTTRRNPDNTGTPVLVRHAAELAHTGGSRWDLAPILDLVPEVKRQGIRRLAVVGV GCQVSALRAIEAQLGLEKLYVVGLVCTDNMTFANWQRLIKTTSRSPRTVKKLEFMADFRIWFWHENGAIEKVSYFEMPMD KLRGCFPQACLSCFDQTNGLADLSVGYMAADIGWQWFLVRNEQGEALFNLLRDDLEMGRFTDRGNRSEAMKQILRYLGKP AITLPSLLAQLFTWQVEHFGPRGLEFARLAVENKQTRNWYYLKTHRPDKLKKLIPRHVQAILDQYRLK >Mature_387_residues TQAPIGPAYPLLQNRTCSNCGLCFHAQFEAHVEEICPFEDDRVSEREVQLHGRSRRLSGDELYFGVFRSMHAARLSTPRP DSQTGGAVSTLLERLLDSGKVEAVLTTRRNPDNTGTPVLVRHAAELAHTGGSRWDLAPILDLVPEVKRQGIRRLAVVGVG CQVSALRAIEAQLGLEKLYVVGLVCTDNMTFANWQRLIKTTSRSPRTVKKLEFMADFRIWFWHENGAIEKVSYFEMPMDK LRGCFPQACLSCFDQTNGLADLSVGYMAADIGWQWFLVRNEQGEALFNLLRDDLEMGRFTDRGNRSEAMKQILRYLGKPA ITLPSLLAQLFTWQVEHFGPRGLEFARLAVENKQTRNWYYLKTHRPDKLKKLIPRHVQAILDQYRLK
Specific function: Unknown
COG id: COG1035
COG function: function code C; Coenzyme F420-reducing hydrogenase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007516 - InterPro: IPR007525 [H]
Pfam domain/function: PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N [H]
EC number: NA
Molecular weight: Translated: 44206; Mature: 44075
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQAPIGPAYPLLQNRTCSNCGLCFHAQFEAHVEEICPFEDDRVSEREVQLHGRSRRLSG CCCCCCCCCCHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCC DELYFGVFRSMHAARLSTPRPDSQTGGAVSTLLERLLDSGKVEAVLTTRRNPDNTGTPVL CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHH VRHAAELAHTGGSRWDLAPILDLVPEVKRQGIRRLAVVGVGCQVSALRAIEAQLGLEKLY HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEHHEECCCHHHHHHHHHHHHCHHEEE VVGLVCTDNMTFANWQRLIKTTSRSPRTVKKLEFMADFRIWFWHENGAIEKVSYFEMPMD EEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEEEECCCCEEEHHHHHCCHH KLRGCFPQACLSCFDQTNGLADLSVGYMAADIGWQWFLVRNEQGEALFNLLRDDLEMGRF HHHCCCHHHHHHHHHHCCCCCCHHHHHEEECCCEEEEEEECCCCHHHHHHHHHHHHHCCC TDRGNRSEAMKQILRYLGKPAITLPSLLAQLFTWQVEHFGPRGLEFARLAVENKQTRNWY CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEE YLKTHRPDKLKKLIPRHVQAILDQYRLK EEEECCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQAPIGPAYPLLQNRTCSNCGLCFHAQFEAHVEEICPFEDDRVSEREVQLHGRSRRLSG CCCCCCCCCHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCC DELYFGVFRSMHAARLSTPRPDSQTGGAVSTLLERLLDSGKVEAVLTTRRNPDNTGTPVL CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHH VRHAAELAHTGGSRWDLAPILDLVPEVKRQGIRRLAVVGVGCQVSALRAIEAQLGLEKLY HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEHHEECCCHHHHHHHHHHHHCHHEEE VVGLVCTDNMTFANWQRLIKTTSRSPRTVKKLEFMADFRIWFWHENGAIEKVSYFEMPMD EEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEEEECCCCEEEHHHHHCCHH KLRGCFPQACLSCFDQTNGLADLSVGYMAADIGWQWFLVRNEQGEALFNLLRDDLEMGRF HHHCCCHHHHHHHHHHCCCCCCHHHHHEEECCCEEEEEEECCCCHHHHHHHHHHHHHCCC TDRGNRSEAMKQILRYLGKPAITLPSLLAQLFTWQVEHFGPRGLEFARLAVENKQTRNWY CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEE YLKTHRPDKLKKLIPRHVQAILDQYRLK EEEECCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]