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The map label for this gene is clpS [H]

Identifier: 37522100

GI number: 37522100

Start: 2685607

End: 2686191

Strand: Reverse

Name: clpS [H]

Synonym: gll2531

Alternate gene names: 37522100

Gene position: 2686191-2685607 (Counterclockwise)

Preceding gene: 37522104

Following gene: 37522099

Centisome position: 57.66

GC content: 63.93

Gene sequence:

>585_bases
GTGCTGTCCAGCGCCGAGGCGCCGAGCCCTGGAACGGTCCAATGGGCACCGAACGGGCAAAAGGCTCAAGACCGGCAGCA
TCGCGTTGCGTCTGTCCACGTGACGGGCCTTGCGGCATCTGGATACCTTGCCGTGGCATCCTATCCAGCCTCCCGGCAAC
CCGGCGATGTGCAAAAACGCCTTCGGTGGGGGGCCATAGTCGTGAGCTTTGGATACACTGGCACTCAGGACGATTACCCG
CACGCATCCATGGAGCGCATGGTTCTCGCACCCGCTGCCGTCTCGGCACCGCCTTTGCCCACCAAGACGCCCCTCGACCC
GGTCAAGACACCGGAGAAGACGCCCCTGCGCTGGCGCGACTGGGTGGTGCGGCTGTTCAATGACCCGGTCAACAAGTTCG
AACACGTCGTCGAAAGCCTTTGCAAGCATGTGCCGGGCATGTCGCAGGATATGGCCTGGTCGGTTGCCTGGCAGGCCCAC
CGCGAAGGGGTGGCCGCCACCTACCAGGGGCCGCGCGAAGTGGCCGAACTGGTCTGCGAAAAACTGGTCCGCGATGGACT
CATTTCCGACTGCTGCGAAAGCTGA

Upstream 100 bases:

>100_bases
CCTACAATGGCTTTCAATCGATGTCCCGGCTGGAACCAACGCACACGGCCCAAGGGCAATAGCTTGAGTTCCAATAATTT
AATGTTAAAGCATAAACCAG

Downstream 100 bases:

>100_bases
CGGATCACAGCGCCACTATTCAATTGTTAAGTCGGCAAAGAAAGGTTTCCGACCCTGGCCTACACCGGCTACAGTGGGGA
AGTTCGACCGTCGATCAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MLSSAEAPSPGTVQWAPNGQKAQDRQHRVASVHVTGLAASGYLAVASYPASRQPGDVQKRLRWGAIVVSFGYTGTQDDYP
HASMERMVLAPAAVSAPPLPTKTPLDPVKTPEKTPLRWRDWVVRLFNDPVNKFEHVVESLCKHVPGMSQDMAWSVAWQAH
REGVAATYQGPREVAELVCEKLVRDGLISDCCES

Sequences:

>Translated_194_residues
MLSSAEAPSPGTVQWAPNGQKAQDRQHRVASVHVTGLAASGYLAVASYPASRQPGDVQKRLRWGAIVVSFGYTGTQDDYP
HASMERMVLAPAAVSAPPLPTKTPLDPVKTPEKTPLRWRDWVVRLFNDPVNKFEHVVESLCKHVPGMSQDMAWSVAWQAH
REGVAATYQGPREVAELVCEKLVRDGLISDCCES
>Mature_194_residues
MLSSAEAPSPGTVQWAPNGQKAQDRQHRVASVHVTGLAASGYLAVASYPASRQPGDVQKRLRWGAIVVSFGYTGTQDDYP
HASMERMVLAPAAVSAPPLPTKTPLDPVKTPEKTPLRWRDWVVRLFNDPVNKFEHVVESLCKHVPGMSQDMAWSVAWQAH
REGVAATYQGPREVAELVCEKLVRDGLISDCCES

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 21243; Mature: 21243

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSAEAPSPGTVQWAPNGQKAQDRQHRVASVHVTGLAASGYLAVASYPASRQPGDVQKR
CCCCCCCCCCCEEEECCCCCCHHHHHHHHHEEEEEEEECCCEEEEECCCCCCCCHHHHHH
LRWGAIVVSFGYTGTQDDYPHASMERMVLAPAAVSAPPLPTKTPLDPVKTPEKTPLRWRD
HHHCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
WVVRLFNDPVNKFEHVVESLCKHVPGMSQDMAWSVAWQAHREGVAATYQGPREVAELVCE
HHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
KLVRDGLISDCCES
HHHHCCHHHHHHCC
>Mature Secondary Structure
MLSSAEAPSPGTVQWAPNGQKAQDRQHRVASVHVTGLAASGYLAVASYPASRQPGDVQKR
CCCCCCCCCCCEEEECCCCCCHHHHHHHHHEEEEEEEECCCEEEEECCCCCCCCHHHHHH
LRWGAIVVSFGYTGTQDDYPHASMERMVLAPAAVSAPPLPTKTPLDPVKTPEKTPLRWRD
HHHCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
WVVRLFNDPVNKFEHVVESLCKHVPGMSQDMAWSVAWQAHREGVAATYQGPREVAELVCE
HHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
KLVRDGLISDCCES
HHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]