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The map label for this gene is yebC [C]

Identifier: 37522076

GI number: 37522076

Start: 2666144

End: 2666899

Strand: Direct

Name: yebC [C]

Synonym: glr2507

Alternate gene names: 37522076

Gene position: 2666144-2666899 (Clockwise)

Preceding gene: 37522073

Following gene: 37522079

Centisome position: 57.23

GC content: 65.87

Gene sequence:

>756_bases
ATGGCAGGGCATAGCAAGTGGGCGCAGATCAAGCGCCAGAAAGCCAAAAACGACGTGGCCAAAGGGGCGATGTTCGCCCG
CCTCTCCCGCGAAATCATCGTCGCCACGCGCCTGGGCGGCCCCGACCCGGCGGGAAATTTTCGGTTGCGCCTGGCCATCG
AGCAGGCCAAGGCGGCGAGTTTGCCGGGGGAGAACATCCAGCGGGCCATCGACAAAGGCAGTGGCGCCATCGAGGGCGAC
AACTTCGAAGAGATCCGCTACGAGGGCTACGGCCCGGCGGGGGTGGCGATTTTGATCGAAGCGCAGACCGACAACCGCAA
CCGGACAGTGGCGGATCTGCGGGCGGTCTTCAGCCGCAACGGCGGCAATCTCGGCGAAACCGGCTGCGTGGGTTGGATGT
TTCAGCAGCGGGGCGTGGCGGTCCTCGAAGGGCCGGTGCGCGAGGAGGAACTCATCGAGGCGGCCCTCGACGGCGGCGCC
CTGGGCTACGAAATTGATCCGCAGGGCCAGGGGGTAGAGGTCACCTGCGAAGCTGCGGATCTCGAAGCGCTCACCGACGC
CCTCAAGGGGGCCGGCTTTCGGCTGGCTGCGGCCGAGGTGCGTTGGGTACCCGACAACAACATCGAGCTCGCCGATCCGG
ACGTGGCCCGCCAGGTGCTCACCCTGCTTGAGAAGCTCGAAAGCCTGGACGACGTGCAGCGAGTGAGCGCCAATCATCTG
GTCGAAGACGCGGTGCTGGAGTCAATCTACGCCTGA

Upstream 100 bases:

>100_bases
GTTTTCTTAGGGATTGCTGTCGGGGGACGCAATGCGCTTCCGGCTGGGGCGGCGATTTTGCTGTGATAGATTCGACCAGA
ATCAGCAAGCGGCGCAGATC

Downstream 100 bases:

>100_bases
TGGGGCCGCTGGGCGGGTCGGTCCGTTTACCCCGGCAACCGGGGCAAGGTTGAATGAGTGGTGGAAGCATCGGGCGGCCC
CAAGCGGCTACGGAACAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MAGHSKWAQIKRQKAKNDVAKGAMFARLSREIIVATRLGGPDPAGNFRLRLAIEQAKAASLPGENIQRAIDKGSGAIEGD
NFEEIRYEGYGPAGVAILIEAQTDNRNRTVADLRAVFSRNGGNLGETGCVGWMFQQRGVAVLEGPVREEELIEAALDGGA
LGYEIDPQGQGVEVTCEAADLEALTDALKGAGFRLAAAEVRWVPDNNIELADPDVARQVLTLLEKLESLDDVQRVSANHL
VEDAVLESIYA

Sequences:

>Translated_251_residues
MAGHSKWAQIKRQKAKNDVAKGAMFARLSREIIVATRLGGPDPAGNFRLRLAIEQAKAASLPGENIQRAIDKGSGAIEGD
NFEEIRYEGYGPAGVAILIEAQTDNRNRTVADLRAVFSRNGGNLGETGCVGWMFQQRGVAVLEGPVREEELIEAALDGGA
LGYEIDPQGQGVEVTCEAADLEALTDALKGAGFRLAAAEVRWVPDNNIELADPDVARQVLTLLEKLESLDDVQRVSANHL
VEDAVLESIYA
>Mature_250_residues
AGHSKWAQIKRQKAKNDVAKGAMFARLSREIIVATRLGGPDPAGNFRLRLAIEQAKAASLPGENIQRAIDKGSGAIEGDN
FEEIRYEGYGPAGVAILIEAQTDNRNRTVADLRAVFSRNGGNLGETGCVGWMFQQRGVAVLEGPVREEELIEAALDGGAL
GYEIDPQGQGVEVTCEAADLEALTDALKGAGFRLAAAEVRWVPDNNIELADPDVARQVLTLLEKLESLDDVQRVSANHLV
EDAVLESIYA

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=248, Percent_Identity=28.6290322580645, Blast_Score=110, Evalue=1e-24,
Organism=Escherichia coli, GI1788171, Length=249, Percent_Identity=39.7590361445783, Blast_Score=184, Evalue=5e-48,
Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=35.7446808510638, Blast_Score=138, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=26.2295081967213, Blast_Score=77, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=28.5171102661597, Blast_Score=108, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24583305, Length=249, Percent_Identity=28.9156626506024, Blast_Score=84, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2507_GLOVI (Q7NHM8)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_925453.1
- ProteinModelPortal:   Q7NHM8
- SMR:   Q7NHM8
- GeneID:   2600908
- GenomeReviews:   BA000045_GR
- KEGG:   gvi:glr2507
- NMPDR:   fig|251221.1.peg.2507
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   GVIO251221:GLR2507-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26964; Mature: 26832

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWAQIKRQKAKNDVAKGAMFARLSREIIVATRLGGPDPAGNFRLRLAIEQAKAAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEEEEHHHHHC
LPGENIQRAIDKGSGAIEGDNFEEIRYEGYGPAGVAILIEAQTDNRNRTVADLRAVFSRN
CCHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCC
GGNLGETGCVGWMFQQRGVAVLEGPVREEELIEAALDGGALGYEIDPQGQGVEVTCEAAD
CCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCEEECCCCCCEEEEEECHH
LEALTDALKGAGFRLAAAEVRWVPDNNIELADPDVARQVLTLLEKLESLDDVQRVSANHL
HHHHHHHHHCCCEEEEEEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEDAVLESIYA
HHHHHHHHHCC
>Mature Secondary Structure 
AGHSKWAQIKRQKAKNDVAKGAMFARLSREIIVATRLGGPDPAGNFRLRLAIEQAKAAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEEEEHHHHHC
LPGENIQRAIDKGSGAIEGDNFEEIRYEGYGPAGVAILIEAQTDNRNRTVADLRAVFSRN
CCHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCC
GGNLGETGCVGWMFQQRGVAVLEGPVREEELIEAALDGGALGYEIDPQGQGVEVTCEAAD
CCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCEEECCCCCCEEEEEECHH
LEALTDALKGAGFRLAAAEVRWVPDNNIELADPDVARQVLTLLEKLESLDDVQRVSANHL
HHHHHHHHHCCCEEEEEEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEDAVLESIYA
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292