| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37522074
Identifier: 37522074
GI number: 37522074
Start: 2663453
End: 2663821
Strand: Reverse
Name: 37522074
Synonym: gll2505
Alternate gene names: NA
Gene position: 2663821-2663453 (Counterclockwise)
Preceding gene: 37522075
Following gene: 37522070
Centisome position: 57.18
GC content: 66.94
Gene sequence:
>369_bases GTGTCAAGTGGATCAGACCCCGCCGGCCAGGTGCGCCGCACCCCGAAACAGGAGCGCGGTCGACAGCGCGTCGAGCGGAT TTTGCCGGCCGCCACCGAGGTGTTCGCCGAGGTGGGCTACGAGGCGGCCACCACCCACGGCATCGCGGAGCGCGCCGAGA CCGCCGTCGGTTCGCTCTACCAGTTTTTCCCCGACAAGCGGGCTCTCTTTAAGGCCCTGGAACAGCGACACATCGAGCGG GTACACATCGCTTGGGCACGGTTGGGCGCCCTGCCCCTCGAGGAGTTGGGTTTCGAGGGGTTCATGCAACGGTTGCTGTG CAAGGACTGCTCCCGGCAGTTCTTGCTCCCGGTGGGGCAGAGCGCGTAG
Upstream 100 bases:
>100_bases TCTTCAACATCCTGATGGGCGACCGCGTCGAACCCAGACGCGAATTTATCGAGACCTACGGTCCACGGCTGCAGATGGCC GACCTGGACATTTAGGTTCG
Downstream 100 bases:
>100_bases AAACCCGGGGCGGCAGCGATGTAGCGGGTGGTGGACTCGGACGTCGGCGGACTGGCAATGCGGCACCGCCGGTTGTATCC GAAAGACACGATATCTTGTC
Product: TetR family transcriptional regulatory protein
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulatory Protein; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; TetR Family Transcriptional Regulatory Protein; HTH-Type Transcriptional Regulator BetI; Transcription Regulator Protein; Transcriptional Regulator Protein
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSSGSDPAGQVRRTPKQERGRQRVERILPAATEVFAEVGYEAATTHGIAERAETAVGSLYQFFPDKRALFKALEQRHIER VHIAWARLGALPLEELGFEGFMQRLLCKDCSRQFLLPVGQSA
Sequences:
>Translated_122_residues MSSGSDPAGQVRRTPKQERGRQRVERILPAATEVFAEVGYEAATTHGIAERAETAVGSLYQFFPDKRALFKALEQRHIER VHIAWARLGALPLEELGFEGFMQRLLCKDCSRQFLLPVGQSA >Mature_121_residues SSGSDPAGQVRRTPKQERGRQRVERILPAATEVFAEVGYEAATTHGIAERAETAVGSLYQFFPDKRALFKALEQRHIERV HIAWARLGALPLEELGFEGFMQRLLCKDCSRQFLLPVGQSA
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13656; Mature: 13525
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGSDPAGQVRRTPKQERGRQRVERILPAATEVFAEVGYEAATTHGIAERAETAVGSLY CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH QFFPDKRALFKALEQRHIERVHIAWARLGALPLEELGFEGFMQRLLCKDCSRQFLLPVGQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCC SA CC >Mature Secondary Structure SSGSDPAGQVRRTPKQERGRQRVERILPAATEVFAEVGYEAATTHGIAERAETAVGSLY CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH QFFPDKRALFKALEQRHIERVHIAWARLGALPLEELGFEGFMQRLLCKDCSRQFLLPVGQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCC SA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA