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The map label for this gene is ychA [C]

Identifier: 37522062

GI number: 37522062

Start: 2650221

End: 2651048

Strand: Direct

Name: ychA [C]

Synonym: glr2493

Alternate gene names: 37522062

Gene position: 2650221-2651048 (Clockwise)

Preceding gene: 37522061

Following gene: 37522065

Centisome position: 56.88

GC content: 60.63

Gene sequence:

>828_bases
ATGGAGCAATCGTCGGCGCGACAACGTTTTATCCGGGTGCTGCAGCAGCCCGAGGTGCAAATAGACCTGGCGGAAGCAGC
GCTCTATATTGCCCTGGAAGCCTATCCCGGACTCGATGTCGAGGAGTACCTCAACGCCCTCGATACGATGGCTGAGGAGG
TGCGCGAGCGCATCGAGGGCGAGCGCTATCCGCTGCGCATGCTGCAGGGCATCAACCGCTATCTCTACGACGATCTGGGC
TTTCGGGGCAACGAAGAAGAGTACTACGATCCGCGCAACAGCTTTCTCAACGAGGTGATCGACCGCCGCACGGGGATTCC
GATTACCCTGGCGCTGGTGTATCTAGAGATTGCCCGGCGGGTGGACTTTCCGATGGTGGGGGTGAGTATGCCGGGACACT
TTTTGATCCGTCCCGACCGCTCCGATATGGAGATCCACATCGATGCCTTTCATCGGGGTGAAATTCTCTTTCGCGAGGAC
TGCGGGGAACGCCTGGAACGTATTTACGGCCGACGCCTGGAGTTGCATCCGGCTTTTTTCGAGGCGGTGGGCGCCCGGCG
TTTTCTAGCGCGGATGCTCACGAACCTCAAATTTGCCTACTGGGTGCGCTCCGACTGGCAGTCGGCCCTTGGCACCGTCG
AGCGGCTTCTGGTGATCTTCCCAAACACGCCCGCCGAGTGGCGGGACCGGGGGATTCTGCACTACCGGCTGGGACACCCC
ACCGCGGCGCGTGCGGATCTCGAAAATTACCTGAGGAGCGCTCCTGGAGCCGAGGATTCCGCCCGCATCCGGCAGTTGCT
CGACGAACTTCAAAAGCAGGACCGATAA

Upstream 100 bases:

>100_bases
AACTCGAAGCGCTGGCCATCGCCATCGCCGGCCTTGAGGAACTTCCCTTCGACGCGTAAGTCTTTTTGACCAAAGTCGGG
GCGCGTGTCACGCTGAGGCC

Downstream 100 bases:

>100_bases
AAATGCCCGGCGCTTTGGCGGCGCCGGGCAGGTTCGATCCTGGTGAAAGGTTATTCCTGCTGCTGGGAGGGCACCGGCAC
GGTGGGGGTGCGGTAGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MEQSSARQRFIRVLQQPEVQIDLAEAALYIALEAYPGLDVEEYLNALDTMAEEVRERIEGERYPLRMLQGINRYLYDDLG
FRGNEEEYYDPRNSFLNEVIDRRTGIPITLALVYLEIARRVDFPMVGVSMPGHFLIRPDRSDMEIHIDAFHRGEILFRED
CGERLERIYGRRLELHPAFFEAVGARRFLARMLTNLKFAYWVRSDWQSALGTVERLLVIFPNTPAEWRDRGILHYRLGHP
TAARADLENYLRSAPGAEDSARIRQLLDELQKQDR

Sequences:

>Translated_275_residues
MEQSSARQRFIRVLQQPEVQIDLAEAALYIALEAYPGLDVEEYLNALDTMAEEVRERIEGERYPLRMLQGINRYLYDDLG
FRGNEEEYYDPRNSFLNEVIDRRTGIPITLALVYLEIARRVDFPMVGVSMPGHFLIRPDRSDMEIHIDAFHRGEILFRED
CGERLERIYGRRLELHPAFFEAVGARRFLARMLTNLKFAYWVRSDWQSALGTVERLLVIFPNTPAEWRDRGILHYRLGHP
TAARADLENYLRSAPGAEDSARIRQLLDELQKQDR
>Mature_275_residues
MEQSSARQRFIRVLQQPEVQIDLAEAALYIALEAYPGLDVEEYLNALDTMAEEVRERIEGERYPLRMLQGINRYLYDDLG
FRGNEEEYYDPRNSFLNEVIDRRTGIPITLALVYLEIARRVDFPMVGVSMPGHFLIRPDRSDMEIHIDAFHRGEILFRED
CGERLERIYGRRLELHPAFFEAVGARRFLARMLTNLKFAYWVRSDWQSALGTVERLLVIFPNTPAEWRDRGILHYRLGHP
TAARADLENYLRSAPGAEDSARIRQLLDELQKQDR

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI16306502, Length=213, Percent_Identity=30.9859154929577, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI16306500, Length=213, Percent_Identity=30.9859154929577, Blast_Score=96, Evalue=4e-20,
Organism=Escherichia coli, GI1787465, Length=243, Percent_Identity=26.7489711934156, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32232; Mature: 32232

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQSSARQRFIRVLQQPEVQIDLAEAALYIALEAYPGLDVEEYLNALDTMAEEVRERIEG
CCCHHHHHHHHHHHHCCCCEEEHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
ERYPLRMLQGINRYLYDDLGFRGNEEEYYDPRNSFLNEVIDRRTGIPITLALVYLEIARR
CCCHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VDFPMVGVSMPGHFLIRPDRSDMEIHIDAFHRGEILFREDCGERLERIYGRRLELHPAFF
CCCCEEEECCCCCEEECCCCCCCEEEEEEEECCCEEEHHHHHHHHHHHHCCCCCCCHHHH
EAVGARRFLARMLTNLKFAYWVRSDWQSALGTVERLLVIFPNTPAEWRDRGILHYRLGHP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHCCEEEEECCCC
TAARADLENYLRSAPGAEDSARIRQLLDELQKQDR
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEQSSARQRFIRVLQQPEVQIDLAEAALYIALEAYPGLDVEEYLNALDTMAEEVRERIEG
CCCHHHHHHHHHHHHCCCCEEEHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
ERYPLRMLQGINRYLYDDLGFRGNEEEYYDPRNSFLNEVIDRRTGIPITLALVYLEIARR
CCCHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VDFPMVGVSMPGHFLIRPDRSDMEIHIDAFHRGEILFREDCGERLERIYGRRLELHPAFF
CCCCEEEECCCCCEEECCCCCCCEEEEEEEECCCEEEHHHHHHHHHHHHCCCCCCCHHHH
EAVGARRFLARMLTNLKFAYWVRSDWQSALGTVERLLVIFPNTPAEWRDRGILHYRLGHP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHCCEEEEECCCC
TAARADLENYLRSAPGAEDSARIRQLLDELQKQDR
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]