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The map label for this gene is yebA [H]

Identifier: 37521899

GI number: 37521899

Start: 2494992

End: 2495819

Strand: Reverse

Name: yebA [H]

Synonym: gll2330

Alternate gene names: 37521899

Gene position: 2495819-2494992 (Counterclockwise)

Preceding gene: 37521901

Following gene: 37521898

Centisome position: 53.57

GC content: 65.82

Gene sequence:

>828_bases
ATGCCGGACCCAGTCGTACACCCACCAGGCTATCAGCCCGGTTGGCATCGGTGGGCCTTTGCGATAAACTCTTGCTCATT
CGCCCCGTTGGAAAGATATTGCATGCCTCCACGGCTCTCTAGTGCCCTGTTGTGCGCAGTCCTGATCGCTGCTCTGGGCA
TTCCCTGGGCGGTGTCGGCTTCTCAAGAAGCGATGGGCAGTGCTGTCAGCCTGATTGACCCGGCAAGCCCTCAAGTACTT
CCGGAGGCGATCCCTATCCCTGCTGCGCCGCTACGCCTGAAGATCAGCCGTCCCAGCCCGCGCCGTCTGCCCAAACCACC
GCGCGTGGGAGCCCGCCCCGCCCAGGCCGCTGTGCCCCTGGCAGTTGCCGCTCCGCTGCTCGACTCGCTGGTGCCGGTAG
AGGTGCCGGAAGCTACTACCGAAGCTCTGGTCTCACCTTTATCCGTGGCGGCGCCTGTGATTGCTCCATTCGGTGAGCGC
ATCCACCTGCTGACCGGGGCGGTCACCTTTCACCGCGGTATCGACCTGGCTGCGGCCCAGGGAACGCCTGTGGCGGCGGC
GGCGGCCGGATTGGTGCTGGCGGCCGGTGCGACGGGTCCGCTAGGAAACGCCGTGGTGCTGGGCCACAGCGAGGGAGGGC
GAAGCCGCTACGGGCATTTGCAGGAGGTTTTGGTCCGGCCGGGCGAATGGGTGCAAAAAGGAGCCCCGATCGGCCGGGTC
GGCAGCAGCGGCCTGGCCACGGCTCCTTACCTGCATTTTGAGTACTGGCGCAAGTCGGCCACAGCGACCTGGCAGGCCAT
CGATCCGGCAACCCTCCTTTCGCTGTAG

Upstream 100 bases:

>100_bases
TCCCGGCCGATCGAGAGCTTCCGCAAGCCGTGCCGCCGCCCCCAAACCGGCCAGCAATGCCCTGCCGATCAGTTCCCCCA
AATCAAAATCCGTTGCGCGC

Downstream 100 bases:

>100_bases
CCTGACGGCGCCGCAATCGTGTCACAATTTGAAATAGTGACTGAACGCGAGATGGCCTGGTTACCAGAAAACTATCGCCG
CCTGATACCCTATGTTGCGC

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MPDPVVHPPGYQPGWHRWAFAINSCSFAPLERYCMPPRLSSALLCAVLIAALGIPWAVSASQEAMGSAVSLIDPASPQVL
PEAIPIPAAPLRLKISRPSPRRLPKPPRVGARPAQAAVPLAVAAPLLDSLVPVEVPEATTEALVSPLSVAAPVIAPFGER
IHLLTGAVTFHRGIDLAAAQGTPVAAAAAGLVLAAGATGPLGNAVVLGHSEGGRSRYGHLQEVLVRPGEWVQKGAPIGRV
GSSGLATAPYLHFEYWRKSATATWQAIDPATLLSL

Sequences:

>Translated_275_residues
MPDPVVHPPGYQPGWHRWAFAINSCSFAPLERYCMPPRLSSALLCAVLIAALGIPWAVSASQEAMGSAVSLIDPASPQVL
PEAIPIPAAPLRLKISRPSPRRLPKPPRVGARPAQAAVPLAVAAPLLDSLVPVEVPEATTEALVSPLSVAAPVIAPFGER
IHLLTGAVTFHRGIDLAAAQGTPVAAAAAGLVLAAGATGPLGNAVVLGHSEGGRSRYGHLQEVLVRPGEWVQKGAPIGRV
GSSGLATAPYLHFEYWRKSATATWQAIDPATLLSL
>Mature_274_residues
PDPVVHPPGYQPGWHRWAFAINSCSFAPLERYCMPPRLSSALLCAVLIAALGIPWAVSASQEAMGSAVSLIDPASPQVLP
EAIPIPAAPLRLKISRPSPRRLPKPPRVGARPAQAAVPLAVAAPLLDSLVPVEVPEATTEALVSPLSVAAPVIAPFGERI
HLLTGAVTFHRGIDLAAAQGTPVAAAAAGLVLAAGATGPLGNAVVLGHSEGGRSRYGHLQEVLVRPGEWVQKGAPIGRVG
SSGLATAPYLHFEYWRKSATATWQAIDPATLLSL

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=112, Percent_Identity=39.2857142857143, Blast_Score=84, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 28506; Mature: 28375

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDPVVHPPGYQPGWHRWAFAINSCSFAPLERYCMPPRLSSALLCAVLIAALGIPWAVSA
CCCCCCCCCCCCCCHHHEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEECC
SQEAMGSAVSLIDPASPQVLPEAIPIPAAPLRLKISRPSPRRLPKPPRVGARPAQAAVPL
CHHHHCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
AVAAPLLDSLVPVEVPEATTEALVSPLSVAAPVIAPFGERIHLLTGAVTFHRGIDLAAAQ
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCEEECC
GTPVAAAAAGLVLAAGATGPLGNAVVLGHSEGGRSRYGHLQEVLVRPGEWVQKGAPIGRV
CCCHHHHHHHHHEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCC
GSSGLATAPYLHFEYWRKSATATWQAIDPATLLSL
CCCCCCCCCHHHHHHHHHCCCCEEECCCCHHHHCC
>Mature Secondary Structure 
PDPVVHPPGYQPGWHRWAFAINSCSFAPLERYCMPPRLSSALLCAVLIAALGIPWAVSA
CCCCCCCCCCCCCHHHEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEECC
SQEAMGSAVSLIDPASPQVLPEAIPIPAAPLRLKISRPSPRRLPKPPRVGARPAQAAVPL
CHHHHCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
AVAAPLLDSLVPVEVPEATTEALVSPLSVAAPVIAPFGERIHLLTGAVTFHRGIDLAAAQ
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCEEECC
GTPVAAAAAGLVLAAGATGPLGNAVVLGHSEGGRSRYGHLQEVLVRPGEWVQKGAPIGRV
CCCHHHHHHHHHEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCC
GSSGLATAPYLHFEYWRKSATATWQAIDPATLLSL
CCCCCCCCCHHHHHHHHHCCCCEEECCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]