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The map label for this gene is ydeM [H]

Identifier: 37521814

GI number: 37521814

Start: 2406210

End: 2407523

Strand: Direct

Name: ydeM [H]

Synonym: glr2245

Alternate gene names: 37521814

Gene position: 2406210-2407523 (Clockwise)

Preceding gene: 37521813

Following gene: 37521815

Centisome position: 51.65

GC content: 47.11

Gene sequence:

>1314_bases
ATGCAGCCTTCTCCATTCAATGTTTCTATCCGTCGCGGAGATAAGCACTATATATTCAACACTTTTAGTGGAAAACTTCT
TCAAATTAGCCACAAAGATAGCGAGGCGCTTGACCAATATTGTAATGGGATCGAGGCTCAAATTTCTCCCGAGCTTCTTT
TGAAGCTTGTCGTCTATCGAATGTTAGTTGCAGATGGCGAAGAAGAATACGCTCTCCTGCAGAAGCGGTATCAGTCGAGC
CAGCAAAATCCTCGCCACTATGCTGCAACAATAGTCACCAGCCTTGGGTGCAATTTCGACTGTCCTTACTGCTACGAAGC
CAAGTCTCCTTCCATTTTAACCAAGGAAACTCAGATCGCCTTTTTGCAATTACTTGATGAAAAGCTTCCGACTCTTAATA
GCTTTAGCGTCACTTGGTTCGGCGGTGAGCCTTTGCTTGGGAAAAATGCCCTGCTCGCGTTGTCTGATCAGTTTATACAT
CGCTGTGAATCCGCCAATGTTGACTATAGTGCTACCCTAATTACCAATGGTTATTTACTGGATGAAAAGACCTGCTTGCA
GTTGAGAGAACGAAATGTTTATCGAGCACAGGTGGGGTTAGACGGCCCCCCTGAAATTCACAATCGTATGCGCCCGCTTG
CGAGTGGTAGTGGTAGCGGTACGTTTGATCGGATCATTGAGAACCTGCGGCATGCAGTTGAGTATTTGAAAATCAGTATT
CGTGTGAACATTGACCGCCACAACTTTGCTCGTGCTGAAGACCTGCTCAAGATTTTGGAAGCCAACGGATTAAGCGGCAA
GCTCATGGTTTACTTGGGCCGACTCGTTTCCATTGATGATGGTATTCCTACCCCTTCTGCCGCGTATCACTCCTGTTGTT
TGACCAATCAGGAATTTGCGCAGATTGAGTCAGCATTTATGGACACCGCCAGACGTTACAAATTCGCAGAATCCTGGTTG
CCTAAATCCGTTGGTACACCCTGCACAGCAGTTCGCACAAACGAGATAGTTCTCGGCAGCAAAGGCGAACTTTACAAGTG
TTGGGATTCAGTTGGAAATCCCCTGGAAGTTATTGGGCACATTAGTGATTACAACAATTGCAACACCAGGCTGCAAAAAT
GGCTGAAGTACAATCCCTTTACCGACGCCGAATGTAGAAGTTGTTTTGCACTGCCTGTCTGTATGGGAGGGTGCGCACAT
TATGCAATGAACCCCAGTCATTATGATAACCGCTGTGACACTTTCCGGTACAATCACCGCGAGCGGATCCTGGCTTACAT
CGAAGCGCAGGAGCAAAAAGCGGCGTCCGGCTGA

Upstream 100 bases:

>100_bases
CAAAAAATGGATCAGAAATAGATCGCTGCACTGCCAAAGACAATTCTCAGTAGACTTGATTGGTTACTAATTTTCTGGCT
CCCAAGGAAGCTAACCAGCG

Downstream 100 bases:

>100_bases
GAATAATGCTGGCTTCTCACGTTACGATGCAACCATGTCTCGTGGGGCGGCAAATAATGGTGTATCCGCAGCGCGTTGAA
CCGAAACAAGGCCAGGAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: AnSME homolog [H]

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MQPSPFNVSIRRGDKHYIFNTFSGKLLQISHKDSEALDQYCNGIEAQISPELLLKLVVYRMLVADGEEEYALLQKRYQSS
QQNPRHYAATIVTSLGCNFDCPYCYEAKSPSILTKETQIAFLQLLDEKLPTLNSFSVTWFGGEPLLGKNALLALSDQFIH
RCESANVDYSATLITNGYLLDEKTCLQLRERNVYRAQVGLDGPPEIHNRMRPLASGSGSGTFDRIIENLRHAVEYLKISI
RVNIDRHNFARAEDLLKILEANGLSGKLMVYLGRLVSIDDGIPTPSAAYHSCCLTNQEFAQIESAFMDTARRYKFAESWL
PKSVGTPCTAVRTNEIVLGSKGELYKCWDSVGNPLEVIGHISDYNNCNTRLQKWLKYNPFTDAECRSCFALPVCMGGCAH
YAMNPSHYDNRCDTFRYNHRERILAYIEAQEQKAASG

Sequences:

>Translated_437_residues
MQPSPFNVSIRRGDKHYIFNTFSGKLLQISHKDSEALDQYCNGIEAQISPELLLKLVVYRMLVADGEEEYALLQKRYQSS
QQNPRHYAATIVTSLGCNFDCPYCYEAKSPSILTKETQIAFLQLLDEKLPTLNSFSVTWFGGEPLLGKNALLALSDQFIH
RCESANVDYSATLITNGYLLDEKTCLQLRERNVYRAQVGLDGPPEIHNRMRPLASGSGSGTFDRIIENLRHAVEYLKISI
RVNIDRHNFARAEDLLKILEANGLSGKLMVYLGRLVSIDDGIPTPSAAYHSCCLTNQEFAQIESAFMDTARRYKFAESWL
PKSVGTPCTAVRTNEIVLGSKGELYKCWDSVGNPLEVIGHISDYNNCNTRLQKWLKYNPFTDAECRSCFALPVCMGGCAH
YAMNPSHYDNRCDTFRYNHRERILAYIEAQEQKAASG
>Mature_437_residues
MQPSPFNVSIRRGDKHYIFNTFSGKLLQISHKDSEALDQYCNGIEAQISPELLLKLVVYRMLVADGEEEYALLQKRYQSS
QQNPRHYAATIVTSLGCNFDCPYCYEAKSPSILTKETQIAFLQLLDEKLPTLNSFSVTWFGGEPLLGKNALLALSDQFIH
RCESANVDYSATLITNGYLLDEKTCLQLRERNVYRAQVGLDGPPEIHNRMRPLASGSGSGTFDRIIENLRHAVEYLKISI
RVNIDRHNFARAEDLLKILEANGLSGKLMVYLGRLVSIDDGIPTPSAAYHSCCLTNQEFAQIESAFMDTARRYKFAESWL
PKSVGTPCTAVRTNEIVLGSKGELYKCWDSVGNPLEVIGHISDYNNCNTRLQKWLKYNPFTDAECRSCFALPVCMGGCAH
YAMNPSHYDNRCDTFRYNHRERILAYIEAQEQKAASG

Specific function: Unknown

COG id: COG0641

COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family [H]

Homologues:

Organism=Escherichia coli, GI87081923, Length=348, Percent_Identity=26.7241379310345, Blast_Score=80, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 49339; Mature: 49339

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPSPFNVSIRRGDKHYIFNTFSGKLLQISHKDSEALDQYCNGIEAQISPELLLKLVVYR
CCCCCCEEEEEECCCEEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHH
MLVADGEEEYALLQKRYQSSQQNPRHYAATIVTSLGCNFDCPYCYEAKSPSILTKETQIA
HHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHH
FLQLLDEKLPTLNSFSVTWFGGEPLLGKNALLALSDQFIHRCESANVDYSATLITNGYLL
HHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCEEE
DEKTCLQLRERNVYRAQVGLDGPPEIHNRMRPLASGSGSGTFDRIIENLRHAVEYLKISI
CHHHHHHHHHCCEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEEEE
RVNIDRHNFARAEDLLKILEANGLSGKLMVYLGRLVSIDDGIPTPSAAYHSCCLTNQEFA
EEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHH
QIESAFMDTARRYKFAESWLPKSVGTPCTAVRTNEIVLGSKGELYKCWDSVGNPLEVIGH
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEECCCCCHHHHHHHCCCHHHHHHH
ISDYNNCNTRLQKWLKYNPFTDAECRSCFALPVCMGGCAHYAMNPSHYDNRCDTFRYNHR
HCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
ERILAYIEAQEQKAASG
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQPSPFNVSIRRGDKHYIFNTFSGKLLQISHKDSEALDQYCNGIEAQISPELLLKLVVYR
CCCCCCEEEEEECCCEEEEECCCCCEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHH
MLVADGEEEYALLQKRYQSSQQNPRHYAATIVTSLGCNFDCPYCYEAKSPSILTKETQIA
HHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHH
FLQLLDEKLPTLNSFSVTWFGGEPLLGKNALLALSDQFIHRCESANVDYSATLITNGYLL
HHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCEEE
DEKTCLQLRERNVYRAQVGLDGPPEIHNRMRPLASGSGSGTFDRIIENLRHAVEYLKISI
CHHHHHHHHHCCEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEEEE
RVNIDRHNFARAEDLLKILEANGLSGKLMVYLGRLVSIDDGIPTPSAAYHSCCLTNQEFA
EEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHH
QIESAFMDTARRYKFAESWLPKSVGTPCTAVRTNEIVLGSKGELYKCWDSVGNPLEVIGH
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEECCCCCHHHHHHHCCCHHHHHHH
ISDYNNCNTRLQKWLKYNPFTDAECRSCFALPVCMGGCAHYAMNPSHYDNRCDTFRYNHR
HCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
ERILAYIEAQEQKAASG
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]